Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20523
         (592 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            26   0.79 
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    26   1.0  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   9.8  

>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 26.2 bits (55), Expect = 0.79
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = -1

Query: 433 PTEGKPIKATRASPDFSTSKPSPLSPPFFEGSSNCDLYFANLAFKRPK 290
           P +G     T+ S D     P P SPP    S   ++ F+   F  PK
Sbjct: 201 PPKGAGATGTQHS-DQQQEPPRPSSPPAIRRSGTLEVTFSERTFVTPK 247


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = -1

Query: 433 PTEGKPIKATRASPDFSTSKPSPLSPPFFEGSSNCDLYFANLAFKRPK 290
           P +G     T+ S D     P P SPP    S   ++ F+   F  PK
Sbjct: 201 PPKGAGATGTQHS-DQQQELPRPSSPPAIRRSGTLEVTFSERTFVTPK 247


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -1

Query: 322 YFANLAFKRPK*YSVALFFCVLAFLSQFLIFSLIS 218
           Y + L F  P      +  C+   LSQ + F LIS
Sbjct: 268 YLSVLVFYLPADSGEKIALCISILLSQTMFFLLIS 302


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,644
Number of Sequences: 2352
Number of extensions: 10230
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)