Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20522
(637 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VZS3 Cluster: Protein translation factor SUI1 homolog... 92 9e-18
UniRef50_O60739 Cluster: Eukaryotic translation initiation facto... 81 3e-14
UniRef50_P41567 Cluster: Eukaryotic translation initiation facto... 79 9e-14
UniRef50_Q5CLR9 Cluster: Translation initiation factor SUI1; n=2... 72 1e-11
UniRef50_UPI0000DD7914 Cluster: PREDICTED: similar to suppressor... 69 9e-11
UniRef50_A6SQI8 Cluster: Translation initiation factor 3; n=15; ... 69 9e-11
UniRef50_Q6MVC9 Cluster: Probable translation initiation factor ... 66 5e-10
UniRef50_Q5KLG3 Cluster: Suppressor of initiator codon mutations... 65 1e-09
UniRef50_Q94JV4 Cluster: Protein translation factor SUI1 homolog... 62 8e-09
UniRef50_Q7XN79 Cluster: OSJNBa0089N06.3 protein; n=6; Oryza sat... 62 1e-08
UniRef50_Q00RG6 Cluster: H0303G06.6 protein; n=2; Oryza sativa|R... 62 1e-08
UniRef50_Q00T99 Cluster: Translation initiation factor SUI1, put... 60 3e-08
UniRef50_Q38LF1 Cluster: Eukaryotic translation initiation facto... 58 1e-07
UniRef50_Q86AU4 Cluster: Similar to translation initiation facto... 54 3e-06
UniRef50_UPI0000498D7F Cluster: Translation initiation factor; n... 49 8e-05
UniRef50_UPI000150A7AF Cluster: Translation initiation factor SU... 48 1e-04
UniRef50_A0CXT2 Cluster: Chromosome undetermined scaffold_30, wh... 47 4e-04
UniRef50_Q4QAL1 Cluster: Translation factor SUI1, putative; n=5;... 46 0.001
UniRef50_A7ES43 Cluster: Predicted protein; n=1; Sclerotinia scl... 42 0.016
UniRef50_Q40537 Cluster: Nicotiana tabacum (clone 12) activating... 40 0.066
UniRef50_A2DSB0 Cluster: Translation initiation factor SUI1 fami... 39 0.12
UniRef50_A0E5U0 Cluster: Chromosome undetermined scaffold_8, who... 38 0.15
UniRef50_Q98S27 Cluster: Translation factor sui1 homolog; n=1; G... 38 0.20
UniRef50_Q31S87 Cluster: Putative uncharacterized protein; n=2; ... 34 3.3
UniRef50_Q3ZW20 Cluster: Sensor protein; n=1; Dehalococcoides sp... 33 5.8
UniRef50_Q7R6W5 Cluster: Cir1 protein, putative; n=11; Plasmodiu... 33 5.8
UniRef50_Q6VZB4 Cluster: CNPV233 ankyrin repeat protein; n=1; Ca... 33 7.6
UniRef50_Q7VDW2 Cluster: Sulfate adenylyltransferase; n=26; cell... 33 7.6
>UniRef50_Q9VZS3 Cluster: Protein translation factor SUI1 homolog;
n=11; Bilateria|Rep: Protein translation factor SUI1
homolog - Drosophila melanogaster (Fruit fly)
Length = 110
Score = 92.3 bits (219), Expect = 9e-18
Identities = 39/43 (90%), Positives = 41/43 (95%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
GTV+EHPEYGEVLQLQGDQRENICQWLTK GL KP+QLKVHGF
Sbjct: 68 GTVIEHPEYGEVLQLQGDQRENICQWLTKVGLAKPDQLKVHGF 110
Score = 85.8 bits (203), Expect = 8e-16
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +1
Query: 256 GLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
GLVH+RIQQRNGRKTLTTVQGLS+EYDLKKIVR+CKKEFAC
Sbjct: 26 GLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSCKKEFAC 66
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +2
Query: 182 MSIQNLNTFDPFADAIK 232
MSIQNLNT DPFADAIK
Sbjct: 1 MSIQNLNTRDPFADAIK 17
>UniRef50_O60739 Cluster: Eukaryotic translation initiation factor
1b; n=44; Fungi/Metazoa group|Rep: Eukaryotic
translation initiation factor 1b - Homo sapiens (Human)
Length = 113
Score = 80.6 bits (190), Expect = 3e-14
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
GTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
Score = 68.5 bits (160), Expect = 1e-10
Identities = 28/39 (71%), Positives = 36/39 (92%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFAC 69
>UniRef50_P41567 Cluster: Eukaryotic translation initiation factor
1; n=53; Eukaryota|Rep: Eukaryotic translation
initiation factor 1 - Homo sapiens (Human)
Length = 113
Score = 79.0 bits (186), Expect = 9e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 68.5 bits (160), Expect = 1e-10
Identities = 28/39 (71%), Positives = 36/39 (92%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFAC 69
>UniRef50_Q5CLR9 Cluster: Translation initiation factor SUI1; n=2;
Cryptosporidium|Rep: Translation initiation factor SUI1
- Cryptosporidium hominis
Length = 112
Score = 71.7 bits (168), Expect = 1e-11
Identities = 30/46 (65%), Positives = 41/46 (89%)
Frame = +1
Query: 241 GRRSSGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
G+ SSG VH+R QQRNG+K+LTTVQGLS+E+DLK++++A KK F+C
Sbjct: 23 GKSSSGYVHIRNQQRNGKKSLTTVQGLSAEFDLKRLLKAFKKNFSC 68
Score = 52.0 bits (119), Expect = 1e-05
Identities = 17/42 (40%), Positives = 31/42 (73%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 506
GT+++ PE+G +LQ+QGD R N+ ++L +V +++K+HG
Sbjct: 70 GTIIDDPEHGPILQIQGDHRHNVARFLVGENIVNSDEIKIHG 111
>UniRef50_UPI0000DD7914 Cluster: PREDICTED: similar to suppressor of
initiator codon mutations, related sequence 1; n=1; Homo
sapiens|Rep: PREDICTED: similar to suppressor of
initiator codon mutations, related sequence 1 - Homo
sapiens
Length = 288
Score = 68.9 bits (161), Expect = 9e-11
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
GTV+EHPEYGEV+Q QGDQ NICQ+L + GL K +QLKVH F
Sbjct: 246 GTVIEHPEYGEVIQPQGDQCNNICQFLVELGLAKDDQLKVHVF 288
Score = 61.7 bits (143), Expect = 1e-08
Identities = 27/39 (69%), Positives = 34/39 (87%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A K FAC
Sbjct: 207 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAF-KNFAC 244
Score = 32.7 bits (71), Expect = 7.6
Identities = 14/30 (46%), Positives = 25/30 (83%)
Frame = +2
Query: 143 SVSLKQRDPTFNRMSIQNLNTFDPFADAIK 232
+VS ++++ ++ + +IQNL++FDPFADA K
Sbjct: 166 AVSTEEKE-SYCKFAIQNLHSFDPFADASK 194
>UniRef50_A6SQI8 Cluster: Translation initiation factor 3; n=15;
Pezizomycotina|Rep: Translation initiation factor 3 -
Botryotinia fuckeliana B05.10
Length = 169
Score = 68.9 bits (161), Expect = 9e-11
Identities = 29/56 (51%), Positives = 42/56 (75%)
Frame = +1
Query: 211 PIRRCYQKLGGRRSSGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
P ++ G ++++ +H+RIQQRNGRKTLTTVQGL ++D KKI++ KK+FAC
Sbjct: 68 PFAEADEEPGDQKAAEYIHIRIQQRNGRKTLTTVQGLPKKFDQKKILKVIKKKFAC 123
Score = 44.4 bits (100), Expect = 0.002
Identities = 22/45 (48%), Positives = 34/45 (75%), Gaps = 2/45 (4%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLT-KSGL-VKPEQLKVHGF 509
GT+V G+V+QLQGDQR+++ ++LT K GL ++ + +KVHGF
Sbjct: 125 GTIVNDVIMGDVIQLQGDQRKDVQEFLTGKDGLELEAKTIKVHGF 169
>UniRef50_Q6MVC9 Cluster: Probable translation initiation factor
SUI1; n=2; Neurospora crassa|Rep: Probable translation
initiation factor SUI1 - Neurospora crassa
Length = 117
Score = 66.5 bits (155), Expect = 5e-10
Identities = 27/45 (60%), Positives = 37/45 (82%)
Frame = +1
Query: 244 RRSSGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+++ +H+RIQQRNGRKTLTTVQG+ ++D KKI++ KKEFAC
Sbjct: 24 KQTQEYIHIRIQQRNGRKTLTTVQGIPKKFDAKKILKVVKKEFAC 68
Score = 37.5 bits (83), Expect = 0.27
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 5/48 (10%)
Frame = +3
Query: 381 GTVV--EHPEYGEVLQLQGDQRENICQWLTK--SGL-VKPEQLKVHGF 509
GT++ E + G+V+QLQGDQR I +LT GL + + +KVHGF
Sbjct: 70 GTIIGDEDSKMGDVIQLQGDQRAKIKDFLTNKDEGLGLDAKTIKVHGF 117
>UniRef50_Q5KLG3 Cluster: Suppressor of initiator codon mutations,
putative; n=1; Filobasidiella neoformans|Rep: Suppressor
of initiator codon mutations, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 159
Score = 65.3 bits (152), Expect = 1e-09
Identities = 27/39 (69%), Positives = 35/39 (89%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+H+R+QQRNGRKTLTTVQG+ S+Y+ KI++A KKEFAC
Sbjct: 59 IHIRLQQRNGRKTLTTVQGIPSKYNHSKILKAMKKEFAC 97
Score = 35.9 bits (79), Expect = 0.82
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Frame = +3
Query: 405 YGEVLQLQGDQRENICQWLTKSGLVKPEQLK----VHGF 509
+G+VLQLQGDQR Q+L SG+V ++ K VHG+
Sbjct: 121 HGDVLQLQGDQRVAAKQFLIDSGIVAQKEAKDLIVVHGY 159
>UniRef50_Q94JV4 Cluster: Protein translation factor SUI1 homolog 2;
n=42; Eukaryota|Rep: Protein translation factor SUI1
homolog 2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 113
Score = 62.5 bits (145), Expect = 8e-09
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = +1
Query: 241 GRRSSGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
G + VH+R+QQRNGRK+LTTVQGL EY KI++ KKEF C
Sbjct: 24 GAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCC 69
Score = 59.7 bits (138), Expect = 6e-08
Identities = 24/43 (55%), Positives = 35/43 (81%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
GTVV+ E G+V+QLQGDQR+N+ +L ++GLVK + +K+HGF
Sbjct: 71 GTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
>UniRef50_Q7XN79 Cluster: OSJNBa0089N06.3 protein; n=6; Oryza
sativa|Rep: OSJNBa0089N06.3 protein - Oryza sativa
(Rice)
Length = 580
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +1
Query: 241 GRRSSG-LVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
GR + G VHVR+QQRNGRKTLTTVQG+ EY+ K++R K+E C
Sbjct: 490 GRGAGGDYVHVRVQQRNGRKTLTTVQGIGGEYNYAKVLRDLKRELCC 536
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
G VVE E G+++QLQGD R ++ +L K+G+V+ + +KVHGF
Sbjct: 538 GNVVEDKELGKIIQLQGDHRNSVSDFLAKAGMVRKDNIKVHGF 580
>UniRef50_Q00RG6 Cluster: H0303G06.6 protein; n=2; Oryza sativa|Rep:
H0303G06.6 protein - Oryza sativa (Rice)
Length = 241
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +1
Query: 241 GRRSSG-LVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
GR + G VHVR+QQRNGRKTLTTVQG+ EY+ K++R K+E C
Sbjct: 151 GRGAGGDYVHVRVQQRNGRKTLTTVQGIGGEYNYAKVLRDLKRELCC 197
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
G VVE E G+++QLQGD R ++ +L K+G+V+ + +KVHGF
Sbjct: 199 GNVVEDKELGKIIQLQGDHRNSVSDFLAKAGMVRKDNIKVHGF 241
>UniRef50_Q00T99 Cluster: Translation initiation factor SUI1,
putative; n=1; Ostreococcus tauri|Rep: Translation
initiation factor SUI1, putative - Ostreococcus tauri
Length = 129
Score = 60.5 bits (140), Expect = 3e-08
Identities = 24/39 (61%), Positives = 34/39 (87%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+H+R+QQRNGRK+LTTVQGL+ + +LK +V+ CKK+F C
Sbjct: 46 IHIRMQQRNGRKSLTTVQGLNPKINLKLVVKECKKKFNC 84
Score = 50.0 bits (114), Expect = 5e-05
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 506
G +VE E+G+++QLQGDQR+NI Q+L + K +KVHG
Sbjct: 86 GCIVEDSEHGDIVQLQGDQRKNIAQFLVDERISKKALIKVHG 127
>UniRef50_Q38LF1 Cluster: Eukaryotic translation initiation factor
1; n=9; Apicomplexa|Rep: Eukaryotic translation
initiation factor 1 - Toxoplasma gondii
Length = 163
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +1
Query: 259 LVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
L ++R QQRNGRK++TTVQGL DLKK+VRA KK+F+C
Sbjct: 80 LRNIRNQQRNGRKSVTTVQGLDKSLDLKKMVRALKKQFSC 119
Score = 50.8 bits (116), Expect = 3e-05
Identities = 18/42 (42%), Positives = 31/42 (73%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 506
GTV+E PE+G ++QLQGDQR + ++L + + +Q+++HG
Sbjct: 121 GTVIEDPEHGSIIQLQGDQRHAVKEFLEREAICSVDQIRIHG 162
>UniRef50_Q86AU4 Cluster: Similar to translation initiation factor 3
(EIF3); Sui1p; n=2; Dictyostelium discoideum|Rep:
Similar to translation initiation factor 3 (EIF3); Sui1p
- Dictyostelium discoideum (Slime mold)
Length = 110
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = +1
Query: 235 LGGRRSSGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
LGG VH+RI QR+GRK +TTV+GL + DLKKI++ KK C
Sbjct: 19 LGGDSGISYVHIRIFQRSGRKAVTTVEGLPPKIDLKKILKHLKKSLNC 66
Score = 41.1 bits (92), Expect = 0.022
Identities = 15/51 (29%), Positives = 31/51 (60%)
Frame = +3
Query: 357 MQEGVRVQGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
+++ + G +VE G +++LQGD+R+ I +L + + + +K+HGF
Sbjct: 60 LKKSLNCNGNIVEEENLGMIIKLQGDKRKEIALFLIEEKISQKPSIKIHGF 110
>UniRef50_UPI0000498D7F Cluster: Translation initiation factor; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: Translation
initiation factor - Entamoeba histolytica HM-1:IMSS
Length = 110
Score = 49.2 bits (112), Expect = 8e-05
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +1
Query: 247 RSSGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+ S +VH RIQQRNGRK +TT+ G+ YD I++ K+ F C
Sbjct: 23 KGSFIVHFRIQQRNGRKCVTTITGIPERYDADLILKHFKRTFNC 66
Score = 34.7 bits (76), Expect = 1.9
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 408 GEV-LQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
GEV +L GDQR+ + G++ PE +K+HGF
Sbjct: 76 GEVEFKLSGDQRKAASNFFLAEGILLPENIKIHGF 110
>UniRef50_UPI000150A7AF Cluster: Translation initiation factor SUI1
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Translation initiation factor SUI1 family protein -
Tetrahymena thermophila SB210
Length = 101
Score = 48.4 bits (110), Expect = 1e-04
Identities = 18/39 (46%), Positives = 29/39 (74%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+H+R++QR GRK TTV+G+ E+D +KI++ KK +C
Sbjct: 19 IHIRVEQRRGRKCFTTVEGIPPEFDYEKIMKYWKKWLSC 57
Score = 37.5 bits (83), Expect = 0.27
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 384 TVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 506
T+VE E +V++L GD R I Q+L++ G+ + + +HG
Sbjct: 60 TIVEEDEGKKVIKLNGDHRNQIQQFLSEEGIAAVDNITIHG 100
>UniRef50_A0CXT2 Cluster: Chromosome undetermined scaffold_30, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_30,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 107
Score = 46.8 bits (106), Expect = 4e-04
Identities = 17/40 (42%), Positives = 29/40 (72%)
Frame = +1
Query: 259 LVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
++H+ +++R+ RKT T + G+ E+DL KI+R KK+F C
Sbjct: 21 VIHIHLKKRSARKTQTIIVGIPDEFDLNKIIRFWKKQFNC 60
Score = 35.1 bits (77), Expect = 1.4
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 381 GTVVEHPEYGE--VLQLQGDQRENICQWLTKSGLVKPEQLKVHG 506
G + + +YG+ ++L GD R+ I ++L + G+ + +KVHG
Sbjct: 63 GIISKDEDYGDQVTIRLTGDNRQQIAKFLVEEGIALQDNIKVHG 106
>UniRef50_Q4QAL1 Cluster: Translation factor SUI1, putative; n=5;
Trypanosomatidae|Rep: Translation factor SUI1, putative
- Leishmania major
Length = 107
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/48 (41%), Positives = 34/48 (70%)
Frame = +1
Query: 235 LGGRRSSGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
LGG++ VH+R+QQR G+K +TTVQGL+ + + ++I R ++ + C
Sbjct: 20 LGGQK----VHIRVQQRKGKKFVTTVQGLNQKLNFRRINREFQRRWGC 63
Score = 38.7 bits (86), Expect = 0.12
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVH 503
GTV+ P+ G V+QLQG+ ENI Q+L + L++H
Sbjct: 65 GTVISTPDAGTVIQLQGNWSENIKQFLLDEHMATENNLEIH 105
>UniRef50_A7ES43 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 165
Score = 41.5 bits (93), Expect = 0.016
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 11/50 (22%)
Frame = +1
Query: 262 VHVRIQQRNGRKT-----------LTTVQGLSSEYDLKKIVRACKKEFAC 378
VH+R QQ GR LTTVQGL +++KK+V+A KK+FAC
Sbjct: 71 VHLRCQQTGGRPKRNMEGKKKPHMLTTVQGLPDRFNMKKVVKAFKKKFAC 120
Score = 39.1 bits (87), Expect = 0.088
Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Frame = +3
Query: 384 TVVEHPEYGEVLQLQGDQRENICQWL-TKSGL-VKPEQLKVHG 506
++VE +GEV+Q+QGD R+ I ++L TK GL + E + VHG
Sbjct: 123 SIVEDKVFGEVIQIQGDYRQKIYEFLTTKDGLELDEENVVVHG 165
>UniRef50_Q40537 Cluster: Nicotiana tabacum (clone 12) activating
factor DNA sequence; n=1; Nicotiana tabacum|Rep:
Nicotiana tabacum (clone 12) activating factor DNA
sequence - Nicotiana tabacum (Common tobacco)
Length = 81
Score = 39.5 bits (88), Expect = 0.066
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQG 318
VH+RIQQRNG+K+LTTVQG
Sbjct: 61 VHIRIQQRNGKKSLTTVQG 79
>UniRef50_A2DSB0 Cluster: Translation initiation factor SUI1 family
protein; n=2; Trichomonas vaginalis G3|Rep: Translation
initiation factor SUI1 family protein - Trichomonas
vaginalis G3
Length = 111
Score = 38.7 bits (86), Expect = 0.12
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+H+R QQ + R++LT +QGL + D K++ KK C
Sbjct: 29 IHIRYQQVSSRRSLTIIQGLPKKLDCDKVLSFFKKSLCC 67
>UniRef50_A0E5U0 Cluster: Chromosome undetermined scaffold_8, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_8,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 223
Score = 38.3 bits (85), Expect = 0.15
Identities = 18/70 (25%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 172 VQSYVHPESQHIRPIRRCYQKLGGRRSSGLVHVRIQQRNGRKTLTTVQGLSSE-YDLKKI 348
+Q ++ + ++P + +K G S ++++++++RN K +TT+ GL DLK+
Sbjct: 113 IQQHMAQKIPLVQPPLKKRRKNGKVPESEMIYIKVKERNKNKFITTLSGLEKHGLDLKET 172
Query: 349 VRACKKEFAC 378
+ K+F C
Sbjct: 173 SKKISKKFGC 182
>UniRef50_Q98S27 Cluster: Translation factor sui1 homolog; n=1;
Guillardia theta|Rep: Translation factor sui1 homolog -
Guillardia theta (Cryptomonas phi)
Length = 149
Score = 37.9 bits (84), Expect = 0.20
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 12/54 (22%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEY------------DLKKIVRACKKEFACKVR 387
+ +R+QQR GRK +T ++GL + DLKKI+RA K+ F C R
Sbjct: 55 IQIRLQQRTGRKFITVIEGLGNIVIINQIDKNKKIPDLKKILRAMKQRFGCNGR 108
>UniRef50_Q31S87 Cluster: Putative uncharacterized protein; n=2;
Synechococcus elongatus|Rep: Putative uncharacterized
protein - Synechococcus sp. (strain PCC 7942) (Anacystis
nidulans R2)
Length = 848
Score = 33.9 bits (74), Expect = 3.3
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 390 VEHPEYGEVL-QLQGDQRENICQWLTKSGLVKPEQLKVHGFKPPC*NITCPH 542
++H Y E L + +GD R NI QWL ++GL + + GF P NI PH
Sbjct: 675 LQHAGYVEGLPKTEGDLRSNISQWLIENGLPE-DSFYCLGFTP---NIQMPH 722
>UniRef50_Q3ZW20 Cluster: Sensor protein; n=1; Dehalococcoides sp.
CBDB1|Rep: Sensor protein - Dehalococcoides sp. (strain
CBDB1)
Length = 852
Score = 33.1 bits (72), Expect = 5.8
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 160 KRPYVQSYVHPESQHIRPIRRCYQK-LGGRRSSGLVHVRIQQRNGRKTLTTVQGLSSEYD 336
++P+VQ ++ PE + + I + YQK + G++SSG + +NG++ + EYD
Sbjct: 395 EKPFVQ-FISPEQREL--IEKHYQKRIEGQKSSGRYEACLINKNGQEVYVEISASLIEYD 451
>UniRef50_Q7R6W5 Cluster: Cir1 protein, putative; n=11; Plasmodium
(Vinckeia)|Rep: Cir1 protein, putative - Plasmodium
yoelii yoelii
Length = 595
Score = 33.1 bits (72), Expect = 5.8
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Frame = +1
Query: 97 QRVISDSYIVECVVSQR--FVETKRPYVQSYVHPESQHIRPIRRCYQKLG--GRRSSGLV 264
+RV D Y + +V+ + + + + PE I I+ C Q LG SS ++
Sbjct: 185 KRVFEDEYYCDILVTLKNAYENFIKNNNTQKIFPEIIEIEKIKTCKQ-LGEEATTSSKVL 243
Query: 265 HVRIQQR-NGRKTLTTVQGLSSEYDLKKI 348
V++Q NG+K L V+ S D KKI
Sbjct: 244 SVKVQDASNGKKDLKKVEDTSKHIDFKKI 272
>UniRef50_Q6VZB4 Cluster: CNPV233 ankyrin repeat protein; n=1;
Canarypox virus|Rep: CNPV233 ankyrin repeat protein -
Canarypox virus (CNPV)
Length = 471
Score = 32.7 bits (71), Expect = 7.6
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 283 RNGRKTLTTVQGLSSEYDLKKIVRACKKEF 372
+N R TT++ +SS +L+KI+ CK EF
Sbjct: 376 KNTRAYCTTIKSISSRIELRKIMEDCKSEF 405
>UniRef50_Q7VDW2 Cluster: Sulfate adenylyltransferase; n=26;
cellular organisms|Rep: Sulfate adenylyltransferase -
Prochlorococcus marinus
Length = 390
Score = 32.7 bits (71), Expect = 7.6
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 154 ETKRPYVQSYVHPESQHIRPIRRCYQKLGGRRSSGLVHVRI-QQRNGRKTLTTVQGLSSE 330
E K P ++ P S H+ R Q + RR+ G H I + G K+ T +
Sbjct: 252 EVKNPMIRWAYLPYSMHMAGPREALQHMIIRRNYGCSHFIIGRDMAGCKSQLTGEDFYGP 311
Query: 331 YDLKKIVRACKKE 369
YD ++ +AC E
Sbjct: 312 YDAQEFAKACASE 324
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,878,275
Number of Sequences: 1657284
Number of extensions: 11752748
Number of successful extensions: 31717
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 30487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31694
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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