Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20522
(637 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542223-1|CAG47019.1| 113|Homo sapiens GC20 protein. 81 4e-15
BC006996-1|AAH06996.1| 113|Homo sapiens eukaryotic translation ... 81 4e-15
AK223448-1|BAD97168.1| 113|Homo sapiens translation factor sui1... 81 4e-15
AF263452-1|AAF79182.1| 113|Homo sapiens translational factor eI... 81 4e-15
AF064607-1|AAC17112.1| 113|Homo sapiens GC20 protein protein. 81 4e-15
L26247-1|AAA60602.1| 113|Homo sapiens sui1iso1 protein. 79 1e-14
CR457051-1|CAG33332.1| 113|Homo sapiens SUI1 protein. 79 1e-14
BT006645-1|AAP35291.1| 113|Homo sapiens putative translation in... 79 1e-14
BC008710-1|AAH08710.1| 113|Homo sapiens eukaryotic translation ... 79 1e-14
BC005118-1|AAH05118.1| 113|Homo sapiens eukaryotic translation ... 79 1e-14
AJ012375-1|CAD66615.1| 113|Homo sapiens SUI1 protein protein. 79 1e-14
AF100737-1|AAD19900.1| 113|Homo sapiens putative translation in... 79 1e-14
AF083441-1|AAD52028.1| 113|Homo sapiens SUI1 isolog protein. 79 1e-14
AF490966-1|AAO11890.1| 138|Homo sapiens immunoglobulin lambda l... 32 1.5
BC101474-1|AAI01475.1| 1249|Homo sapiens BRCA1 interacting prote... 30 6.0
BC101472-1|AAI01473.1| 1249|Homo sapiens BRCA1 interacting prote... 30 6.0
AF360549-1|AAK38111.1| 1249|Homo sapiens BRCA1-binding helicase-... 30 6.0
>CR542223-1|CAG47019.1| 113|Homo sapiens GC20 protein.
Length = 113
Score = 80.6 bits (190), Expect = 4e-15
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
GTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
Score = 68.5 bits (160), Expect = 2e-11
Identities = 28/39 (71%), Positives = 36/39 (92%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFAC 69
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 185 SIQNLNTFDPFADAIK 232
+IQNL +FDPFADA K
Sbjct: 3 TIQNLQSFDPFADATK 18
>BC006996-1|AAH06996.1| 113|Homo sapiens eukaryotic translation
initiation factor 1B protein.
Length = 113
Score = 80.6 bits (190), Expect = 4e-15
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
GTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
Score = 68.5 bits (160), Expect = 2e-11
Identities = 28/39 (71%), Positives = 36/39 (92%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFAC 69
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 185 SIQNLNTFDPFADAIK 232
+IQNL +FDPFADA K
Sbjct: 3 TIQNLQSFDPFADATK 18
>AK223448-1|BAD97168.1| 113|Homo sapiens translation factor sui1
homolog protein.
Length = 113
Score = 80.6 bits (190), Expect = 4e-15
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
GTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
Score = 66.9 bits (156), Expect = 6e-11
Identities = 27/39 (69%), Positives = 36/39 (92%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+H+RIQQRNGRKTLTTVQG++ +YD +K+V+A KK+FAC
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKEKLVKAFKKKFAC 69
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 185 SIQNLNTFDPFADAIK 232
+IQNL +FDPFADA K
Sbjct: 3 TIQNLQSFDPFADATK 18
>AF263452-1|AAF79182.1| 113|Homo sapiens translational factor eIF-1
protein.
Length = 113
Score = 80.6 bits (190), Expect = 4e-15
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
GTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
Score = 68.5 bits (160), Expect = 2e-11
Identities = 28/39 (71%), Positives = 36/39 (92%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFAC 69
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 185 SIQNLNTFDPFADAIK 232
+IQNL +FDPFADA K
Sbjct: 3 TIQNLQSFDPFADATK 18
>AF064607-1|AAC17112.1| 113|Homo sapiens GC20 protein protein.
Length = 113
Score = 80.6 bits (190), Expect = 4e-15
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
GTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
Score = 65.7 bits (153), Expect = 1e-10
Identities = 27/39 (69%), Positives = 35/39 (89%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+H+RIQQRNG KTLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 31 IHIRIQQRNGGKTLTTVQGIADDYDKKKLVKAFKKKFAC 69
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 185 SIQNLNTFDPFADAIK 232
+IQNL +FDPFADA K
Sbjct: 3 TIQNLQSFDPFADATK 18
>L26247-1|AAA60602.1| 113|Homo sapiens sui1iso1 protein.
Length = 113
Score = 79.0 bits (186), Expect = 1e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 68.5 bits (160), Expect = 2e-11
Identities = 28/39 (71%), Positives = 36/39 (92%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFAC 69
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 185 SIQNLNTFDPFADAIK 232
+IQNL++FDPFADA K
Sbjct: 3 AIQNLHSFDPFADASK 18
>CR457051-1|CAG33332.1| 113|Homo sapiens SUI1 protein.
Length = 113
Score = 79.0 bits (186), Expect = 1e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 68.5 bits (160), Expect = 2e-11
Identities = 28/39 (71%), Positives = 36/39 (92%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFAC 69
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 185 SIQNLNTFDPFADAIK 232
+IQNL++FDPFADA K
Sbjct: 3 AIQNLHSFDPFADASK 18
>BT006645-1|AAP35291.1| 113|Homo sapiens putative translation
initiation factor protein.
Length = 113
Score = 79.0 bits (186), Expect = 1e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 68.5 bits (160), Expect = 2e-11
Identities = 28/39 (71%), Positives = 36/39 (92%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFAC 69
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 185 SIQNLNTFDPFADAIK 232
+IQNL++FDPFADA K
Sbjct: 3 AIQNLHSFDPFADASK 18
>BC008710-1|AAH08710.1| 113|Homo sapiens eukaryotic translation
initiation factor 1 protein.
Length = 113
Score = 79.0 bits (186), Expect = 1e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 68.5 bits (160), Expect = 2e-11
Identities = 28/39 (71%), Positives = 36/39 (92%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFAC 69
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 185 SIQNLNTFDPFADAIK 232
+IQNL++FDPFADA K
Sbjct: 3 AIQNLHSFDPFADASK 18
>BC005118-1|AAH05118.1| 113|Homo sapiens eukaryotic translation
initiation factor 1 protein.
Length = 113
Score = 79.0 bits (186), Expect = 1e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 68.5 bits (160), Expect = 2e-11
Identities = 28/39 (71%), Positives = 36/39 (92%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFAC 69
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 185 SIQNLNTFDPFADAIK 232
+IQNL++FDPFADA K
Sbjct: 3 AIQNLHSFDPFADASK 18
>AJ012375-1|CAD66615.1| 113|Homo sapiens SUI1 protein protein.
Length = 113
Score = 79.0 bits (186), Expect = 1e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 68.5 bits (160), Expect = 2e-11
Identities = 28/39 (71%), Positives = 36/39 (92%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFAC 69
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 185 SIQNLNTFDPFADAIK 232
+IQNL++FDPFADA K
Sbjct: 3 AIQNLHSFDPFADASK 18
>AF100737-1|AAD19900.1| 113|Homo sapiens putative translation
initiation factor A121/Sui1 protein.
Length = 113
Score = 79.0 bits (186), Expect = 1e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 66.9 bits (156), Expect = 6e-11
Identities = 28/39 (71%), Positives = 35/39 (89%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
VH+RIQQRNGRKTLTTVQG++ +YD KK+V+ KK+FAC
Sbjct: 31 VHIRIQQRNGRKTLTTVQGIADDYDKKKLVKPFKKKFAC 69
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 185 SIQNLNTFDPFADAIK 232
+IQNL++FDPFADA K
Sbjct: 3 AIQNLHSFDPFADASK 18
>AF083441-1|AAD52028.1| 113|Homo sapiens SUI1 isolog protein.
Length = 113
Score = 79.0 bits (186), Expect = 1e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +3
Query: 381 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 509
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 68.5 bits (160), Expect = 2e-11
Identities = 28/39 (71%), Positives = 36/39 (92%)
Frame = +1
Query: 262 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFAC 378
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFAC 69
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 185 SIQNLNTFDPFADAIK 232
+IQNL++FDPFADA K
Sbjct: 3 AIQNLHSFDPFADASK 18
>AF490966-1|AAO11890.1| 138|Homo sapiens immunoglobulin lambda
light chain variable region protein.
Length = 138
Score = 32.3 bits (70), Expect = 1.5
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -1
Query: 454 WQIFSRWSP*SCSTSPYSGCSTTVPCTRTPSCMPARSSSGHIPRKGLAP*SASY 293
W F P S S SP G + T+PCTR+ + + + R G AP S Y
Sbjct: 11 WASFMLTQPHSVSESP--GKTVTIPCTRSSGSIASNFVQWYQQRPGSAPTSVIY 62
>BC101474-1|AAI01475.1| 1249|Homo sapiens BRCA1 interacting protein
C-terminal helicase 1 protein.
Length = 1249
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 184 VHPESQ-HIRPIRRCYQKLGGRRSSGLVHVR-IQQRNGRKTLTTVQGLSSEYDLKKIVRA 357
VHPE + +C + L G+ + + + + TL T QG+ +D++++V
Sbjct: 284 VHPEVVGNFNRNEKCMELLDGKNGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVSL 343
Query: 358 CKKEFAC 378
KK AC
Sbjct: 344 GKKLKAC 350
>BC101472-1|AAI01473.1| 1249|Homo sapiens BRCA1 interacting protein
C-terminal helicase 1 protein.
Length = 1249
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 184 VHPESQ-HIRPIRRCYQKLGGRRSSGLVHVR-IQQRNGRKTLTTVQGLSSEYDLKKIVRA 357
VHPE + +C + L G+ + + + + TL T QG+ +D++++V
Sbjct: 284 VHPEVVGNFNRNEKCMELLDGKNGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVSL 343
Query: 358 CKKEFAC 378
KK AC
Sbjct: 344 GKKLKAC 350
>AF360549-1|AAK38111.1| 1249|Homo sapiens BRCA1-binding
helicase-like protein BACH1 protein.
Length = 1249
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 184 VHPESQ-HIRPIRRCYQKLGGRRSSGLVHVR-IQQRNGRKTLTTVQGLSSEYDLKKIVRA 357
VHPE + +C + L G+ + + + + TL T QG+ +D++++V
Sbjct: 284 VHPEVVGNFNRNEKCMELLDGKNGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVSL 343
Query: 358 CKKEFAC 378
KK AC
Sbjct: 344 GKKLKAC 350
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,957,178
Number of Sequences: 237096
Number of extensions: 1773558
Number of successful extensions: 5577
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5575
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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