Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20521
(737 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0463 + 3502708-3503535 34 0.10
11_06_0289 - 21969248-21973516 33 0.24
11_06_0185 + 21018045-21022307 33 0.24
12_01_0612 - 5044639-5044858,5045010-5045167,5045440-5045684,504... 33 0.31
09_04_0613 + 18953761-18953932,18954672-18954799,18954885-189549... 31 0.72
01_05_0801 + 25353708-25353914,25354307-25354429,25355035-253552... 31 0.95
01_02_0049 + 10641363-10641563,10641640-10641750,10641893-106421... 30 1.7
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 29 2.9
01_06_0042 - 25911662-25911736,25912409-25912607,25913275-259133... 29 2.9
01_01_0022 - 170045-170095,170406-170554,170764-170875,171398-17... 29 2.9
10_07_0150 - 13422497-13422575,13423360-13423433,13423948-134241... 29 3.9
05_04_0084 - 17788077-17789240 29 3.9
05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083... 29 5.1
01_06_1419 + 37225007-37225011,37225633-37225852,37226347-372265... 29 5.1
03_04_0159 + 17832666-17832938,17833634-17833873 28 6.7
11_01_0442 - 3369827-3370168,3370608-3372616,3372953-3373277,337... 28 8.9
05_01_0155 + 1043045-1043240,1043325-1043401,1043963-1044092,104... 28 8.9
01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815... 28 8.9
>07_01_0463 + 3502708-3503535
Length = 275
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Frame = +1
Query: 313 EQTNN--FIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAE-V 483
E+TN+ + A E +D K++ + K+E + +L+ +LK+ LEG K++ +E++ A+ +
Sbjct: 180 EKTNDPAKLKAKLEKIDTKIQDLQAKKEDILRQLKEQLKEELEG-GKSKNAIEEKPAQTL 238
Query: 484 YKAIE 498
K IE
Sbjct: 239 EKGIE 243
>11_06_0289 - 21969248-21973516
Length = 1422
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 346 EALDAKMETHE--EKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAI 495
+A + ++TH+ E + I +L RLKDH+E EKT+ EQ E A+
Sbjct: 385 QAKNKAVDTHKLPEWNDNLIEKLAMRLKDHMEADEKTKKLNEQTGVEEETAV 436
>11_06_0185 + 21018045-21022307
Length = 1420
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 346 EALDAKMETHE--EKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAI 495
+A + ++TH+ E + I +L RLKDH+E EKT+ EQ E A+
Sbjct: 385 QAKNKAVDTHKLPEWNDNLIEKLAMRLKDHMEADEKTKKLNEQTGVEEETAV 436
>12_01_0612 -
5044639-5044858,5045010-5045167,5045440-5045684,
5046006-5046294,5047540-5048561,5049320-5049389
Length = 667
Score = 32.7 bits (71), Expect = 0.31
Identities = 18/82 (21%), Positives = 40/82 (48%)
Frame = +3
Query: 474 RGSVQGHXXXXXXXXXXXXENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQ 653
+G+++ + E +++M + + EQ+ ++R +EK + E +QE+L +
Sbjct: 519 QGAIEDNIILKRKTKEMLSECVEQMEFNAKFYHEQIERLRKDTEEKENEFERLLQEELAR 578
Query: 654 AADRRLLIEAEQREKLRNHNIK 719
A + + E + KLR I+
Sbjct: 579 AIECDVDSETTENCKLREEQIQ 600
>09_04_0613 +
18953761-18953932,18954672-18954799,18954885-18954956,
18955033-18955146,18955547-18955615,18955691-18955747,
18956262-18956315,18956387-18956449,18956543-18956605,
18956803-18956967,18957111-18957266,18957315-18957416
Length = 404
Score = 31.5 bits (68), Expect = 0.72
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = +3
Query: 531 ENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNH 710
E LKK IE + V + RAG+ +K Q +A EKLQ+ +D E ++R + H
Sbjct: 126 EKLKKDIEAQNSKKSTV-EARAGDADKKVQELNAKLEKLQKTSD-----EQKRRIQKTEH 179
Query: 711 NIKLAE 728
+K+AE
Sbjct: 180 ALKVAE 185
>01_05_0801 + 25353708-25353914,25354307-25354429,25355035-25355205,
25355303-25355392,25355497-25355583,25355664-25355719,
25355812-25355905,25356032-25356144,25356211-25356283,
25356603-25356683,25356865-25356951,25357031-25357135,
25357279-25357385,25357481-25357541,25357931-25358158,
25359720-25360677,25360816-25360997,25361237-25361326,
25361422-25361709,25361844-25362056,25362560-25362784
Length = 1212
Score = 31.1 bits (67), Expect = 0.95
Identities = 18/73 (24%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Frame = +3
Query: 531 ENLKKMIERLREHEEQV----RKVRAGNQEKFQQLESAIQEKLQQAA----DRRLLIEAE 686
E ++KM + + H +++ +K+R+ + K +L + +E + AA DRR++ + +
Sbjct: 880 EEIRKMQQLAQRHSQKIIDENQKLRSELESKMSELNTRSKELDEIAAKSDYDRRIIDQEK 939
Query: 687 QREKLRNHNIKLA 725
Q+ +++ ++KLA
Sbjct: 940 QKNAIKSSHLKLA 952
>01_02_0049 +
10641363-10641563,10641640-10641750,10641893-10642123,
10642253-10642357,10642546-10642704
Length = 268
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 531 ENLKKMIE-RLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQ 653
EN KK E R R EE+V+K+ Q+K +QL ++I QQ
Sbjct: 64 ENRKKFAESRARSMEEEVKKLHKCLQDKDEQLRTSICSTEQQ 105
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +3
Query: 534 NLKKMIERLREHEEQVRKVRAGNQ---EKFQQLESAIQEKLQQAADRRLLIEAEQREKLR 704
NLK + L + + QV + N+ EK LE ++E + D + ++ E+ L
Sbjct: 846 NLKNLESELEQKQSQVSALEQANEELREKISSLERQLEEARSKLQDEIIKLQGEKERALD 905
Query: 705 N 707
N
Sbjct: 906 N 906
>01_06_0042 -
25911662-25911736,25912409-25912607,25913275-25913348,
25913431-25913580,25913666-25913821,25915378-25915464,
25915706-25915765,25915878-25916414,25917292-25917585
Length = 543
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +3
Query: 282 QDRGGVPHPQRADE*LHRRHQGGARRQDGDPRGKTRGLHQRAALPSQG 425
+DRGG HP+RA E R +R +GD R +R SQG
Sbjct: 32 EDRGGHRHPERAGEEQERAEDD--KRDEGDGERDAREDKERREGDSQG 77
>01_01_0022 -
170045-170095,170406-170554,170764-170875,171398-171469,
171578-171671,171770-171921,172004-172072
Length = 232
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +3
Query: 531 ENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNH 710
+ +KK+ E L ++EQ+RK R G + AI+ + + + + E EQR L N
Sbjct: 33 DKIKKLDEELGRYKEQIRKTRPGPS------QDAIKARAIRLLKHKRMYE-EQRNMLYNQ 85
Query: 711 NIKLAEV 731
L +V
Sbjct: 86 TYNLDQV 92
>10_07_0150 -
13422497-13422575,13423360-13423433,13423948-13424160,
13425143-13425214,13425320-13425745
Length = 287
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/28 (60%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 651 AAASPGWRSRAAGTSPGYRRGL-CELVP 571
AAAS GW RAAGT P GL LVP
Sbjct: 175 AAASSGWLRRAAGTVPRIPCGLVTALVP 202
>05_04_0084 - 17788077-17789240
Length = 387
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/56 (25%), Positives = 36/56 (64%)
Frame = +3
Query: 531 ENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREK 698
E++KK +R ++H EQ ++ + ++ ++ +S E +++ A+++ + + E+REK
Sbjct: 315 ESMKKDKKRQQKHAEQWKERQKMVDKQKKERQSKRTENIRERANQKKMRKIEKREK 370
>05_07_0354 -
29507068-29507170,29507406-29507431,29508264-29508301,
29508722-29508825,29509005-29509024,29509251-29509299,
29510319-29510406,29510463-29510562,29510660-29510737,
29512688-29512804,29513718-29513821,29514497-29514569,
29514904-29514981,29515091-29515215,29515278-29515341,
29515439-29515597,29515950-29516048,29516496-29516624,
29517010-29517075,29517160-29517304,29517379-29517500,
29517683-29517838,29517918-29518029,29518891-29519036,
29519148-29519252,29519391-29519540,29519703-29519776,
29519902-29520055,29520142-29520408
Length = 1016
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +3
Query: 531 ENLKKMIERLREHEEQVRKVRAGNQE--KFQQLESAIQEKLQQAAD-RRLLIEAEQREK 698
E+LKK+++ R+ E++ K+R +E E QE+ ++ D +R ++E +E+
Sbjct: 605 EDLKKLLKEQRQLEDEAAKIRRKKEEITDTMMFEKKRQEETRRRVDIKRRMLETIYKEE 663
>01_06_1419 +
37225007-37225011,37225633-37225852,37226347-37226516,
37226615-37226676,37227002-37227207,37227581-37227634
Length = 238
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 307 RSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGV 441
RS +++I+ +K + TH+E E+ +NE ++ +K L+ V
Sbjct: 139 RSILKSSYIIVSKRGKFPTLVTHQESLESKVNETKATVKFQLKKV 183
>03_04_0159 + 17832666-17832938,17833634-17833873
Length = 170
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +2
Query: 572 GTSSQSPRR*PGEVPAARERHPGEAAAGRRP 664
G Q PRR G VPAA G A RRP
Sbjct: 40 GPGDQGPRRRRGVVPAAAAAAGGRALRERRP 70
>11_01_0442 -
3369827-3370168,3370608-3372616,3372953-3373277,
3373386-3373415
Length = 901
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 537 LKKMIERLRE-HEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQRE 695
LK+ + +LR+ EEQ K+R +K Q+L+S E + + +EA + E
Sbjct: 155 LKECVRQLRQAREEQEEKIRDAVAKKTQELDSHKSELQNHIYELKQQLEAAKLE 208
>05_01_0155 +
1043045-1043240,1043325-1043401,1043963-1044092,
1044376-1044473,1045622-1045729,1045748-1045800,
1046876-1047080
Length = 288
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +1
Query: 358 AKMETHEEKREAYINELRS--RLKDHLEGVEKTRLTLEQQTAE 480
A+ E++ K + N S L++H++ +EKT +T Q++ E
Sbjct: 83 AEAESYASKEQVRYNRFLSPRALREHIKNIEKTAVTALQESPE 125
>01_06_0213 +
27580635-27581105,27581206-27581298,27581376-27581540,
27581640-27581862,27582329-27582429,27582666-27582713,
27583086-27583172,27583745-27583879,27583985-27584140,
27585336-27585545,27585641-27586351,27586429-27586974,
27587872-27588495,27588595-27588699,27590460-27590711,
27590939-27591766
Length = 1584
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Frame = +3
Query: 531 ENLKKMIER----LREHEEQVRKVRAGNQEKF---QQLESAIQEKLQQAADRRLLIEAEQ 689
E ++K +ER R+ EE++ + R QE+F Q+ E EK Q RR + Q
Sbjct: 191 EQMRKEMERHDRERRKEEERLLRERQREQERFLREQRREHERMEKFMQKQSRR-AEKQRQ 249
Query: 690 REKLR 704
+E+LR
Sbjct: 250 KEELR 254
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,012,771
Number of Sequences: 37544
Number of extensions: 299656
Number of successful extensions: 1419
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1419
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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