Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20521
         (737 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    29   0.15 
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    27   0.80 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   2.4  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    25   3.2  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   4.3  
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    23   9.8  

>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 29.1 bits (62), Expect = 0.15
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +3

Query: 270 SEDGQDRGGVPHPQRADE*--LHRRHQGGARRQDGDPRGKTRGLHQR 404
           ++ G  + GV  PQ++ +    HR+HQ    +Q+G  + +  G+HQ+
Sbjct: 248 NQRGNKQNGVNLPQQSAQRQPAHRQHQQWPHQQNGQQQQQRMGIHQQ 294


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 26.6 bits (56), Expect = 0.80
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +3

Query: 546 MIERLREHEEQVRKVRAGNQEKFQQLESA--IQEKLQQAADRRLLIEAEQREKLR 704
           M E +R+    + +  A N+   ++L     +  K Q+  +RR LI  E+ EK+R
Sbjct: 1   MREAIRQLTNSLAEANARNERINEELTQMRILMTKQQEYTERRELIAREEMEKMR 55


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +1

Query: 298 SRIRSEQTNNFIVATKEAL-DAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 474
           S+ R  +  + +   +E L DAK++ HE+ R     E+    K  + GV    + + Q T
Sbjct: 476 SKERIHELQSELDNVREQLGDAKIDKHEDARRKKKQEVVELFKLEVPGVYDRMINMCQPT 535

Query: 475 AEVYKAIEDKM 507
            + Y     K+
Sbjct: 536 HKRYNVAVTKV 546


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 15/58 (25%), Positives = 32/58 (55%)
 Frame = +3

Query: 531 ENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLR 704
           +NL++  ++    +EQ+ ++R   +EK ++     Q + ++A  R    +A+  EKLR
Sbjct: 43  QNLEETRKKNESLQEQLTQLRWLMEEKLREQREDAQRREEEARRREEAAKAD-NEKLR 99


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 381 KTRGLHQRAA-LPSQGSS*GR*EDQVDPGTADRGSVQ 488
           +TR + +R   LP +G+  G       PGT DR S+Q
Sbjct: 2   ETRSMRKRTTRLPEEGAPTG-----AGPGTGDRASIQ 33


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -3

Query: 147 TPTGSASITSYARPPFDISWQRISVDLVSTSMAST 43
           TP    S+  +ARP  +++   +S+   +T +A T
Sbjct: 650 TPNSVGSLQEFARPYRNMATTPVSIRFTNTVIART 684


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,221
Number of Sequences: 2352
Number of extensions: 8993
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)