Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20520
         (500 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   2.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   4.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.2  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 425 TKIHIHEKLYAHAKHNARARE 363
           T+  IHEK   + KH+A  R+
Sbjct: 370 TREEIHEKARENLKHHANLRQ 390


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
 Frame = -1

Query: 452 QQQNNETKTTKI---HIHEKLYAHAKHN 378
           QQQNN    T     H H   + HA+H+
Sbjct: 308 QQQNNNNAATNNQNHHHHAGHHIHAQHH 335


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 321 MFYCYFKIFIITSNLSGARVMFSVRVELLV 410
           +FYC   I +       A ++F+V + LLV
Sbjct: 227 LFYCVLIILLCIYYFYYAFILFTVHLLLLV 256


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -1

Query: 464 LIQRQQQNNETKTTKIHIHEKLYAHAKHNARARE 363
           L+ R    N    + IH+    Y  ++  ARARE
Sbjct: 131 LLHRPDTQNLDLPSFIHVFPDKYVDSQVFARARE 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,935
Number of Sequences: 336
Number of extensions: 1931
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)