Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20520
         (500 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91141-1|CAA62580.1|  862|Homo sapiens rabaptin-5 protein.             30   3.9  
BC041700-1|AAH41700.1|  862|Homo sapiens RABEP1 protein protein.       30   3.9  
AF098638-1|AAC70781.1|  829|Homo sapiens rabaptin-4 protein.           30   3.9  
BC032435-1|AAH32435.1|  716|Homo sapiens RABEP1 protein protein.       29   9.1  

>X91141-1|CAA62580.1|  862|Homo sapiens rabaptin-5 protein.
          Length = 862

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 23/76 (30%), Positives = 37/76 (48%)
 Frame = -1

Query: 464 LIQRQQQNNETKTTKIHIHEKLYAHAKHNARAREVRRDYENFEITIKHF*IRRRDELAKR 285
           L Q +QQ+N+ K    H  +K  A+ +     R + RD +  EI +    +R+ +EL K+
Sbjct: 266 LEQERQQHNQLK----HTWQK--ANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKK 319

Query: 284 DS*S*SSVRFN*KKQH 237
           D       R N +K H
Sbjct: 320 DQEDDEQQRLNKRKDH 335


>BC041700-1|AAH41700.1|  862|Homo sapiens RABEP1 protein protein.
          Length = 862

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 23/76 (30%), Positives = 37/76 (48%)
 Frame = -1

Query: 464 LIQRQQQNNETKTTKIHIHEKLYAHAKHNARAREVRRDYENFEITIKHF*IRRRDELAKR 285
           L Q +QQ+N+ K    H  +K  A+ +     R + RD +  EI +    +R+ +EL K+
Sbjct: 266 LEQERQQHNQLK----HTWQK--ANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKK 319

Query: 284 DS*S*SSVRFN*KKQH 237
           D       R N +K H
Sbjct: 320 DQEDDEQQRLNKRKDH 335


>AF098638-1|AAC70781.1|  829|Homo sapiens rabaptin-4 protein.
          Length = 829

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 23/76 (30%), Positives = 37/76 (48%)
 Frame = -1

Query: 464 LIQRQQQNNETKTTKIHIHEKLYAHAKHNARAREVRRDYENFEITIKHF*IRRRDELAKR 285
           L Q +QQ+N+ K    H  +K  A+ +     R + RD +  EI +    +R+ +EL K+
Sbjct: 266 LEQERQQHNQLK----HTWQK--ANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKK 319

Query: 284 DS*S*SSVRFN*KKQH 237
           D       R N +K H
Sbjct: 320 DQEDDEQQRLNKRKDH 335


>BC032435-1|AAH32435.1|  716|Homo sapiens RABEP1 protein protein.
          Length = 716

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 22/76 (28%), Positives = 37/76 (48%)
 Frame = -1

Query: 464 LIQRQQQNNETKTTKIHIHEKLYAHAKHNARAREVRRDYENFEITIKHF*IRRRDELAKR 285
           L + +QQ+N+ K    H  +K  A+ +     R + RD +  EI +    +R+ +EL K+
Sbjct: 259 LHEERQQHNQLK----HTWQK--ANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKK 312

Query: 284 DS*S*SSVRFN*KKQH 237
           D       R N +K H
Sbjct: 313 DQEDDEQQRLNKRKDH 328


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,767,621
Number of Sequences: 237096
Number of extensions: 1104384
Number of successful extensions: 6348
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6348
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)