Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20518
(407 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0168 + 6094658-6096220,6096335-6096608,6096671-6096821,609... 53 1e-07
06_01_0271 + 2009125-2009424,2009534-2009707,2010268-2010423 33 0.12
11_08_0021 + 27716298-27716478,27717137-27717309,27717408-277175... 29 1.1
04_04_0908 + 29309978-29310144,29310294-29310621,29310944-29311189 29 1.1
03_06_0336 - 33220493-33220986,33221077-33221252,33221357-332214... 29 1.4
03_05_0787 + 27696347-27696708,27696851-27696857,27697066-276973... 29 1.4
11_02_0078 - 8074247-8074837,8075815-8076341,8076453-8077022,807... 28 3.3
07_03_1360 - 25991173-25991261,25991496-25991586,25992318-259924... 28 3.3
07_01_0168 + 1179292-1180354,1180880-1180923 28 3.3
08_01_0522 - 4545166-4545174,4545295-4545447,4545566-4545727,454... 27 4.3
07_03_0918 - 22581625-22581687,22581773-22581868,22581980-225822... 27 4.3
02_04_0188 - 20766093-20766449,20766526-20766624,20766717-207668... 27 4.3
10_08_0985 - 22042801-22042963,22043019-22043138,22043261-220435... 27 5.7
10_08_0789 + 20569738-20570207,20573425-20573464,20573484-205735... 27 5.7
08_02_0460 - 17427050-17427694 27 5.7
07_03_1122 - 24141043-24141411 27 5.7
05_07_0289 + 29004842-29005213,29005318-29005605,29005707-290058... 27 5.7
05_06_0081 + 25423847-25424302 27 5.7
05_03_0356 + 12894195-12894237,12894347-12894484,12894868-128950... 27 5.7
06_03_0405 - 20464701-20466287 27 7.6
05_06_0190 - 26260743-26261198,26261261-26261355,26261425-26262181 27 7.6
02_05_0092 + 25749070-25750638 27 7.6
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 27 7.6
>03_02_0168 +
6094658-6096220,6096335-6096608,6096671-6096821,
6097052-6097262,6097344-6097550,6097982-6098350
Length = 924
Score = 52.8 bits (121), Expect = 1e-07
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 6/58 (10%)
Frame = +2
Query: 251 GHEAVSLDVVFPDADHVYGIPEH-TDGLALKTT-----TSGDPYRLYNLDVFAYILDS 406
G ++++ DV F AD VYG+PEH + LAL+ T +PYRL+NLDVF Y+ +S
Sbjct: 212 GPQSITFDVSFYGADFVYGLPEHGSTSLALRPTRGPGAEESEPYRLFNLDVFEYLHES 269
Score = 31.5 bits (68), Expect = 0.27
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 186 QLDDEEG-TWSETFQSHHDSKPRGTKQFRSTLS 281
Q +EG TW E F+SH D++PRG + +S
Sbjct: 189 QESKQEGETWEEQFRSHTDTRPRGPQSITFDVS 221
>06_01_0271 + 2009125-2009424,2009534-2009707,2010268-2010423
Length = 209
Score = 32.7 bits (71), Expect = 0.12
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 66 EFLDQNGEIAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEEGTW 212
E +++ I +L++ L E + E+EDG+GAN ++EEG W
Sbjct: 151 ESMERGSRILAILDK----LKEEREQQEGNEEEEDGEGANLSEEEEGDW 195
>11_08_0021 + 27716298-27716478,27717137-27717309,27717408-27717578,
27717967-27718077,27718168-27718245,27718642-27718832,
27718873-27718958,27719202-27719206,27719301-27719378,
27719465-27719527,27719597-27719680,27720049-27720209,
27720377-27720416,27720774-27720893,27720993-27721211,
27721927-27722100,27722202-27722883,27722986-27723185,
27723269-27723407,27723502-27723677
Length = 1043
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 123 LVEPLRARREKVED-EDGDGANQLDDEEGTWSETFQSHHDS 242
L+E +E ED +DGDGA LDD++ +T + DS
Sbjct: 901 LMESCIHLKEVQEDGDDGDGAEDLDDDDEEEEDTDEDDEDS 941
>04_04_0908 + 29309978-29310144,29310294-29310621,29310944-29311189
Length = 246
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 254 HEAVSLDVVFPDADHVYGIPEHTDGLALKTTTSGDPY 364
H AV+ P+ D YG+P+HTD AL T DP+
Sbjct: 98 HMAVNYYPRCPEPDLTYGLPKHTDPNAL-TILLPDPH 133
>03_06_0336 -
33220493-33220986,33221077-33221252,33221357-33221492,
33221731-33221894,33222902-33222969
Length = 345
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 33 KVIITSEPLKLEFLDQNGEIAVVLNENSQLLVE 131
+VII SE + +E D+N + + EN QL +E
Sbjct: 311 RVIINSETIVIEMKDENSLLPNTIQENQQLGIE 343
>03_05_0787 +
27696347-27696708,27696851-27696857,27697066-27697371,
27697454-27697873
Length = 364
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 156 VEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGTKQFRSTLSSLMR 293
VED D DG + DD + + + R T RST +SL +
Sbjct: 275 VEDSDDDGESDEDDFDPLSPSSIGTKRSHSMRSTSSMRSTTTSLSK 320
>11_02_0078 -
8074247-8074837,8075815-8076341,8076453-8077022,
8077725-8077752
Length = 571
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 245 TSGHEAVSLDVVFPDADHVYGIPEHTDGLALKTTTSGDP 361
T G V L V++ AD + EH L TTT+G P
Sbjct: 218 TKGTSPVHLTVLWDKADVLRVFLEHDQSLGYITTTNGSP 256
>07_03_1360 -
25991173-25991261,25991496-25991586,25992318-25992409,
25992586-25992673,25992826-25992888,25992975-25993086,
25993255-25993335,25993437-25993541,25993652-25993698,
25993793-25993912
Length = 295
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/59 (22%), Positives = 31/59 (52%)
Frame = +3
Query: 108 ENSQLLVEPLRARREKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGTKQFRSTLSS 284
+ S+ L++ L ++R+ +D D G + DD++ T++ H + ++S++ S
Sbjct: 202 KGSRELLDVLPSKRKHDDDSDSSGESSGDDQDELDLPTYKRHKKMEKEAYNDWKSSVLS 260
>07_01_0168 + 1179292-1180354,1180880-1180923
Length = 368
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = +3
Query: 159 EDEDGD---GANQLDDEEGTWSETFQSHHD 239
ED+DG+ A+ E GTW+ HHD
Sbjct: 170 EDDDGEEIASASSYSSETGTWTAASTVHHD 199
>08_01_0522 -
4545166-4545174,4545295-4545447,4545566-4545727,
4545821-4545895,4545974-4546087,4546257-4546339,
4546496-4546556,4546664-4546726,4546804-4546908,
4547454-4547525,4547602-4547664,4547746-4547853,
4547937-4548039,4548131-4548207,4548335-4548403,
4548488-4548607,4548749-4548839,4549020-4549177,
4549696-4549834,4551164-4551186
Length = 615
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 128 HEQLRVLVENDCYFSILVQEFEFERFGCYDDF 33
+ LR+LV DC+ L ++ E RF +D F
Sbjct: 13 NSMLRILVATDCHLGYLEKD-EIRRFDSFDTF 43
>07_03_0918 - 22581625-22581687,22581773-22581868,22581980-22582268,
22582341-22582477,22582567-22582683,22583277-22583440,
22583542-22583756,22583838-22584004,22584206-22584559,
22584647-22584795,22584907-22585030,22585132-22585371,
22585723-22586140,22586297-22586920,22586999-22587183,
22587302-22587412,22587583-22587789,22587869-22587967,
22588063-22588159,22588296-22588384,22588495-22588548,
22588671-22588793,22588872-22588940,22589020-22589089,
22589202-22589260,22589367-22589570,22590032-22590060,
22590375-22590433,22590513-22590634,22591637-22591830,
22591974-22592088
Length = 1680
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 156 VEDEDGDGANQLDDEEGTWSETFQS 230
V+ D DGA++ DDEE ET +S
Sbjct: 1446 VKAPDADGADKTDDEENPMMETVRS 1470
>02_04_0188 -
20766093-20766449,20766526-20766624,20766717-20766821,
20769149-20769241,20769673-20769765,20770075-20770176,
20770294-20770368,20770465-20770584
Length = 347
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 159 EDEDGDGANQLDDEEGTWSETFQSHHDSKPRGTKQFRSTLSS 284
E+E DG N DD+EG E DS+ TKQ + +S
Sbjct: 301 EEEQEDGKNP-DDDEGDRDEEEGEEGDSEDEYTKQVKQAHAS 341
>10_08_0985 -
22042801-22042963,22043019-22043138,22043261-22043562,
22044055-22044351,22044448-22044556,22044826-22045358,
22045446-22045644,22045741-22045865,22045937-22046020,
22046093-22046221,22046337-22046465,22046593-22046739,
22047106-22047346,22047859-22047980
Length = 899
Score = 27.1 bits (57), Expect = 5.7
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 27 GHKVIITSEPLKLEFLDQNGEIAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEE 203
G ++ S+ +FL + +++ E + + LR +K E ED D NQL ++E
Sbjct: 593 GKQLYKVSKDHFFQFLWRPRPPSLLTPEKEDEIAKNLRKYSKKYEQEDQDAFNQLSEQE 651
>10_08_0789 +
20569738-20570207,20573425-20573464,20573484-20573536,
20573633-20574212,20574323-20575384,20575631-20575813,
20576112-20576199,20576285-20576532,20576712-20577053,
20579026-20579163,20579521-20579547
Length = 1076
Score = 27.1 bits (57), Expect = 5.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 114 SQLLVEPLRARREKVEDEDGDGAN 185
S+ + EP R E V+DEDG GA+
Sbjct: 32 SEKVPEPHHLRAEVVDDEDGGGAD 55
Score = 26.6 bits (56), Expect = 7.6
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 138 RARREKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGT---KQFRSTLSSLMRITST 305
R EKV + A +DDE+G ++ F H S+ RGT + RS SS R T
Sbjct: 29 RRPSEKVPEPHHLRAEVVDDEDGGGADAFGQHGPSR-RGTTRPPRTRSRRSSCSRAART 86
>08_02_0460 - 17427050-17427694
Length = 214
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Frame = +3
Query: 51 EPLKLEFL-DQNGEIAVVLNENSQLLVEPLRARREKVEDE----DGDGANQLDDEEGTWS 215
+P+ L ++ D GE + LN L E A+ K + + DGA ++G W
Sbjct: 56 DPIDLAYIIDNQGEEFLKLNWKEGKLKERRMAKWRKPTSDVLNINSDGAFHSSTKQGGWG 115
Query: 216 ETFQSHH 236
+ HH
Sbjct: 116 YVIRDHH 122
>07_03_1122 - 24141043-24141411
Length = 122
Score = 27.1 bits (57), Expect = 5.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 144 RREKVEDEDGDGANQLDDEEGTWS 215
RR+ DED D ++ +EG+WS
Sbjct: 98 RRQPQGDEDDDATMPVEPDEGSWS 121
>05_07_0289 +
29004842-29005213,29005318-29005605,29005707-29005853,
29005939-29006175,29006261-29006524,29006609-29006725,
29006991-29007042,29007903-29008303,29008380-29008598,
29008692-29008925
Length = 776
Score = 27.1 bits (57), Expect = 5.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 147 REKVEDEDGDGANQLDDEEGTWSETFQSHH 236
R + E+E G GA +++DEE + E H
Sbjct: 155 RRREEEEGGGGAGKVEDEERGFEEMLLREH 184
>05_06_0081 + 25423847-25424302
Length = 151
Score = 27.1 bits (57), Expect = 5.7
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +3
Query: 99 VLNENSQLLVEPLRARREKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGTKQFRSTL 278
+++E+ L +R RE E+E+G G W+E + HH S G + L
Sbjct: 48 LVDEDMATLRRRIREARE-AEEEEGYGGGGGGGLPAEWTELERRHHGSYVAGVRGAVGLL 106
Query: 279 SSLM 290
+L+
Sbjct: 107 QALL 110
>05_03_0356 +
12894195-12894237,12894347-12894484,12894868-12895018,
12895399-12895526,12895704-12895840,12896742-12896847,
12898659-12898762,12899159-12899281,12899620-12899700,
12900159-12900304,12902171-12902243,12902970-12903060,
12904978-12905018,12906079-12906153,12906402-12906569,
12907638-12907676,12907759-12907847,12908014-12908078,
12908794-12908840,12908924-12908983,12909168-12909239,
12910143-12910172,12910526-12910617,12910719-12910802,
12911941-12912046,12912171-12912233,12912776-12912870,
12913000-12913180
Length = 875
Score = 27.1 bits (57), Expect = 5.7
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 322 GRFGPEDDHVRRPVQAVQP 378
G+FG DD V PVQ+ +P
Sbjct: 345 GKFGESDDEVEEPVQSNKP 363
>06_03_0405 - 20464701-20466287
Length = 528
Score = 26.6 bits (56), Expect = 7.6
Identities = 19/78 (24%), Positives = 32/78 (41%)
Frame = +3
Query: 75 DQNGEIAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPRG 254
D NG +A+ + + +EP ++ + E LD S+H K G
Sbjct: 437 DANGTLALKWSRDLYKFMEPYVSKNPR---EAYANYRDLDLGRNKVVNGISSYHHGKVWG 493
Query: 255 TKQFRSTLSSLMRITSTV 308
K FR+ L ++ +TV
Sbjct: 494 EKYFRANFERLAKVKATV 511
>05_06_0190 - 26260743-26261198,26261261-26261355,26261425-26262181
Length = 435
Score = 26.6 bits (56), Expect = 7.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 183 NQLDDEEGTWSETFQSHHDSKPRGTK 260
++ D +E TW E + S + PRG+K
Sbjct: 251 DRCDVDEDTWKELYYSSENRIPRGSK 276
>02_05_0092 + 25749070-25750638
Length = 522
Score = 26.6 bits (56), Expect = 7.6
Identities = 17/86 (19%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +3
Query: 42 ITSEPLKLEFLDQNGEIAVVLNENSQLLVEPLRARREKVED--EDGDGANQLDDEEGTWS 215
+ + P+ + Q +A+ + + E R+ +D D D DD++ +
Sbjct: 142 VPAAPVPVHAPSQPPVVAIAVKKEQNEKDEEEDNGRDDDDDGYSDSDYGMDTDDDDDRYD 201
Query: 216 ETFQSHHDSKPRGTKQFRSTLSSLMR 293
E + P+ T+Q +TL+ + R
Sbjct: 202 ECIEKTPSPPPKSTQQQATTLAEMYR 227
>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 26.6 bits (56), Expect = 7.6
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +3
Query: 3 KVILVNTQGHKVIITSEPLKLEFLDQNGEIAVVLNENSQLLVEPLRARREKVEDEDGDGA 182
K + +NT ++ T L L ++Q + AV E +QLL L R +++ GDGA
Sbjct: 1695 KEMALNTLSGELEHTRNSLAL--VEQQRDEAV---EKTQLLTIELETLRAQIDQLQGDGA 1749
Query: 183 NQLD 194
Q++
Sbjct: 1750 EQMN 1753
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,584,932
Number of Sequences: 37544
Number of extensions: 203676
Number of successful extensions: 904
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 718652880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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