Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20518
(407 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein. 24 1.9
AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein. 24 1.9
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 24 1.9
AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein. 23 4.3
AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein. 23 4.3
AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein. 23 4.3
AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription fact... 23 5.7
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 22 7.5
U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic aci... 22 9.9
>AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein.
Length = 187
Score = 24.2 bits (50), Expect = 1.9
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 27 GHKVIITSEPLKLEFLDQNGEIAVVLNENSQLLVEPLRARREKVED--EDGDGANQLDDE 200
G V T L+ E+ G A + + L + AR K D E+GD +
Sbjct: 13 GQTVAYTIPALRFEYPTMRGFRASI-PDTPGLQMFAFHARLNKPFDQFEEGDYTEDVTAP 71
Query: 201 EGTWSETFQSHHDSKPRGT 257
+G TF ++ + P GT
Sbjct: 72 DGDGRWTFDTNKPALPNGT 90
>AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 24.2 bits (50), Expect = 1.9
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 27 GHKVIITSEPLKLEFLDQNGEIAVVLNENSQLLVEPLRARREKVED--EDGDGANQLDDE 200
G V T L+ E+ G A + + L + AR K D E+GD +
Sbjct: 13 GQTVAYTIPALRFEYPTMRGFRASI-PDTPGLQMFAFHARLNKPFDQFEEGDYTEDVTAP 71
Query: 201 EGTWSETFQSHHDSKPRGT 257
+G TF ++ + P GT
Sbjct: 72 DGDGRWTFDTNKPALPNGT 90
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 24.2 bits (50), Expect = 1.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 24 QGHKVIITSEPLKLEFLDQNGEIAVVLNEN 113
Q K++ ++ LKLE + EI V NEN
Sbjct: 893 QRDKLLKQNDELKLEIKKKENEITKVRNEN 922
>AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.0 bits (47), Expect = 4.3
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 27 GHKVIITSEPLKLEFLDQNGEIAVVLNENSQLLVEPLRARREKVED--EDGDGANQLDDE 200
G V T ++ E+ G A + + L + AR K D E+GD +
Sbjct: 13 GQTVAYTIPAVRFEYPTMRGFRASI-PDTPGLQMFAFHARLNKPFDQFEEGDYTEDVTAP 71
Query: 201 EGTWSETFQSHHDSKPRGT 257
+G TF ++ + P GT
Sbjct: 72 DGDGRWTFDTNKPALPNGT 90
>AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.0 bits (47), Expect = 4.3
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 27 GHKVIITSEPLKLEFLDQNGEIAVVLNENSQLLVEPLRARREKVED--EDGDGANQLDDE 200
G V T ++ E+ G A + + L + AR K D E+GD +
Sbjct: 13 GQTVAYTIPAVRFEYPTMRGFRASI-PDTPGLQMFAFHARLNKPFDQFEEGDYTEDVTAP 71
Query: 201 EGTWSETFQSHHDSKPRGT 257
+G TF ++ + P GT
Sbjct: 72 DGDGRWTFDTNKPALPNGT 90
>AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.0 bits (47), Expect = 4.3
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 27 GHKVIITSEPLKLEFLDQNGEIAVVLNENSQLLVEPLRARREKVED--EDGDGANQLDDE 200
G V T ++ E+ G A + + L + AR K D E+GD +
Sbjct: 13 GQTVAYTIPAVRFEYPTMRGFRASI-PDTPGLQMFAFHARLNKPFDQFEEGDYTEDVTAP 71
Query: 201 EGTWSETFQSHHDSKPRGT 257
+G TF ++ + P GT
Sbjct: 72 DGDGRWTFDTNKPALPNGT 90
>AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription factor
protein.
Length = 391
Score = 22.6 bits (46), Expect = 5.7
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = +3
Query: 165 EDGDGANQLDDEEGTWSETFQSHHDSKPRGTKQFRSTLSSLMRITSTV 308
+DGD + DDEE F + +P + S R TV
Sbjct: 40 DDGDYVQKNDDEEDIVDSDFSIDENDEPISDAEEEPAKGSKRRKVGTV 87
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 22.2 bits (45), Expect = 7.5
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 178 GLISWMMRKELGVRPSSPITTPNLGARSS 264
GLIS E G R S+P +P ARSS
Sbjct: 1434 GLISRWRDMEEGGRQSTPPASPARLARSS 1462
>U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic acid
binding protein protein.
Length = 388
Score = 21.8 bits (44), Expect = 9.9
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +3
Query: 105 NENSQLLVEPLRARREKVEDEDGDGANQLDDEEG 206
N NS R RR +ED G N++ + G
Sbjct: 125 NRNSDPRPATGRKRRRIIEDSASPGVNKIVNSRG 158
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,085
Number of Sequences: 2352
Number of extensions: 7362
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32922351
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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