Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20518
(407 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026208-3|AAB71267.3| 903|Caenorhabditis elegans Hypothetical ... 62 1e-10
Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical pr... 58 2e-09
Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical pr... 58 2e-09
Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical pr... 31 0.32
AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical ... 31 0.32
Z49909-5|CAD59140.1| 594|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical pr... 29 1.7
AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell death-re... 29 1.7
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 28 2.3
AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical ... 28 2.3
AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel... 28 3.0
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z83109-3|CAB05515.2| 300|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 27 5.2
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 27 5.2
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 27 5.2
U58754-8|AAK72082.1| 325|Caenorhabditis elegans Serpentine rece... 27 5.2
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z72502-9|CAE17688.1| 300|Caenorhabditis elegans Hypothetical pr... 27 6.9
U41532-4|AAK68320.1| 767|Caenorhabditis elegans Hypothetical pr... 27 6.9
U41532-3|AAK68319.1| 797|Caenorhabditis elegans Hypothetical pr... 27 6.9
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 27 6.9
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 27 6.9
AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 relate... 27 6.9
AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 relate... 27 6.9
AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 relate... 27 6.9
AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 relate... 27 6.9
Z68114-4|CAA92159.1| 324|Caenorhabditis elegans Hypothetical pr... 26 9.1
U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical pr... 26 9.1
L10986-5|AAR25647.1| 171|Caenorhabditis elegans Hypothetical pr... 26 9.1
AC024759-4|AAK68434.1| 356|Caenorhabditis elegans Hypothetical ... 26 9.1
AC024200-10|AAF35999.1| 284|Caenorhabditis elegans Hypothetical... 26 9.1
>AF026208-3|AAB71267.3| 903|Caenorhabditis elegans Hypothetical
protein F52D1.1 protein.
Length = 903
Score = 62.5 bits (145), Expect = 1e-10
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +2
Query: 251 GHEAVSLDVVFPDADHVYGIPEHTDGLALKTTTSGDPYRLYNLDVFAYILDS 406
G +V +D+ F A HV+GIPEH + +L+ T + +PYRLYNLDVF Y +S
Sbjct: 191 GSSSVGVDIAFVGAKHVFGIPEHAESYSLRDTRTYEPYRLYNLDVFEYETNS 242
Score = 32.7 bits (71), Expect = 0.10
Identities = 22/82 (26%), Positives = 43/82 (52%)
Frame = +3
Query: 12 LVNTQGHKVIITSEPLKLEFLDQNGEIAVVLNENSQLLVEPLRARREKVEDEDGDGANQL 191
++ T G+++++ +P +++F ++ +I +N L E A ++KV D
Sbjct: 123 VLTTDGNRIVLQHKPFRIDFYVKD-KIVSSINAKETLHFE---AFKKKVLLSDR------ 172
Query: 192 DDEEGTWSETFQSHHDSKPRGT 257
E+G W ETF+ D+KP G+
Sbjct: 173 --EKGFWEETFKEIKDTKPHGS 192
>Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical
protein F40F9.6b protein.
Length = 910
Score = 58.4 bits (135), Expect = 2e-09
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +2
Query: 251 GHEAVSLDVVFPDADHVYGIPEHTDGLALKTTT-SGDPYRLYNLDVFAYILDS 406
G +V +D+ F + YG+PEH D AL+ T + DPYRLYNLDVF Y L++
Sbjct: 198 GSSSVGVDISFVNFKTAYGLPEHADAFALRNTVGNSDPYRLYNLDVFEYELNN 250
>Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical
protein F40F9.6a protein.
Length = 924
Score = 58.4 bits (135), Expect = 2e-09
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +2
Query: 251 GHEAVSLDVVFPDADHVYGIPEHTDGLALKTTT-SGDPYRLYNLDVFAYILDS 406
G +V +D+ F + YG+PEH D AL+ T + DPYRLYNLDVF Y L++
Sbjct: 212 GSSSVGVDISFVNFKTAYGLPEHADAFALRNTVGNSDPYRLYNLDVFEYELNN 264
>Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical protein
M03C11.8 protein.
Length = 989
Score = 31.1 bits (67), Expect = 0.32
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +3
Query: 21 TQGHKVIITSEPLKLEFLDQNGEIAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDE 200
T G K + + L+ E ++ G + S+LL + R + VED+ GD N +D E
Sbjct: 901 TDGVKGQLDEDALR-ELKEEEGGEQCGGRDLSKLLSSAISGRYDDVEDDSGDSKNGIDAE 959
Query: 201 EGTWSE 218
E E
Sbjct: 960 EAAKKE 965
>AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 31.1 bits (67), Expect = 0.32
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +3
Query: 21 TQGHKVIITSEPLKLEFLDQNGEIAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDE 200
T G K + + L+ E ++ G + S+LL + R + VED+ GD N +D E
Sbjct: 901 TDGVKGQLDEDALR-ELKEEEGGEQCGGRDLSKLLSSAISGRYDDVEDDSGDSKNGIDAE 959
Query: 201 EGTWSE 218
E E
Sbjct: 960 EAAKKE 965
>Z49909-5|CAD59140.1| 594|Caenorhabditis elegans Hypothetical
protein C14A4.4b protein.
Length = 594
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 147 REKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGTKQFRSTL 278
+EK E+E+ A + EEG +T SHHD+ +F + L
Sbjct: 407 KEKQEEEERKEAERKKLEEGDLPKTMFSHHDAPINRKPEFDAKL 450
>Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical
protein C14A4.4a protein.
Length = 876
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 147 REKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGTKQFRSTL 278
+EK E+E+ A + EEG +T SHHD+ +F + L
Sbjct: 689 KEKQEEEERKEAERKKLEEGDLPKTMFSHHDAPINRKPEFDAKL 732
>AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell
death-related nuclease 3 protein.
Length = 876
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 147 REKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGTKQFRSTL 278
+EK E+E+ A + EEG +T SHHD+ +F + L
Sbjct: 689 KEKQEEEERKEAERKKLEEGDLPKTMFSHHDAPINRKPEFDAKL 732
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 319 HGRFGPEDDHVRRPVQAVQPGRLRIH 396
HG FGP H + P Q PG R H
Sbjct: 119 HGHFGPPGHHFQGPPQHFPPGPPRPH 144
>AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical
protein Y87G2A.1 protein.
Length = 780
Score = 28.3 bits (60), Expect = 2.3
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +3
Query: 108 ENSQLLVEPLRAR-REKVEDEDG--DGANQLDDEEGTWSETFQSHHDSKPRGTKQFRSTL 278
E S +L +P+R R R++V+ E+G DG LD+++ + D + G K+ ++
Sbjct: 655 EKSWVLQKPIRGRPRKRVKLENGQEDGGGDLDEDDDV---VMDDYEDGEENGDKKITASR 711
Query: 279 SS 284
S
Sbjct: 712 RS 713
>AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
c protein.
Length = 1913
Score = 27.9 bits (59), Expect = 3.0
Identities = 21/82 (25%), Positives = 39/82 (47%)
Frame = +3
Query: 63 LEFLDQNGEIAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEEGTWSETFQSHHDS 242
L +L +N IAV+ +++ V+ ++K D +L+ + W + +
Sbjct: 383 LAWLVKNVFIAVITETFAEIRVQFSEMWQKKEVTLDEGFRKKLEKTDDGW-RLIRLDGEV 441
Query: 243 KPRGTKQFRSTLSSLMRITSTV 308
+P G KQ +SSL+R+ S V
Sbjct: 442 EPEGPKQKLQWVSSLLRVNSVV 463
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 141 ARREKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGTKQF 266
A R++V D DGD N++++ G + Q D R + F
Sbjct: 74 ASRKRVHDSDGDSENEVEETVGDVEKRMQKLLDDIRRTNRIF 115
>Z83109-3|CAB05515.2| 300|Caenorhabditis elegans Hypothetical
protein F44G3.5 protein.
Length = 300
Score = 27.1 bits (57), Expect = 5.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 131 FHEQLRVLVENDCYFSILVQEFEFERF 51
F QL ++V +DCYF + + +F+ F
Sbjct: 130 FFRQLIIIVPDDCYFKMDLDQFQVITF 156
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 27.1 bits (57), Expect = 5.2
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2
Query: 218 DLPVPSRLQTSGHEAVSLDVVFPDADHVYGIPEHTDGLALKTTTSGDPYR 367
++P P + T GHEA S+ + A+H + DG+ L TTS D R
Sbjct: 2316 EVPSPRSILT-GHEA-SISALCVSAEHGLVVSGCEDGVILIHTTSSDLLR 2363
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 27.1 bits (57), Expect = 5.2
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2
Query: 218 DLPVPSRLQTSGHEAVSLDVVFPDADHVYGIPEHTDGLALKTTTSGDPYR 367
++P P + T GHEA S+ + A+H + DG+ L TTS D R
Sbjct: 2316 EVPSPRSILT-GHEA-SISALCVSAEHGLVVSGCEDGVILIHTTSSDLLR 2363
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 27.1 bits (57), Expect = 5.2
Identities = 16/77 (20%), Positives = 32/77 (41%)
Frame = +3
Query: 66 EFLDQNGEIAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEEGTWSETFQSHHDSK 245
EF D+ + + + EN L+E L + + ++ E + NQ+ D +
Sbjct: 319 EFQDEIRQEFLKIQENENKLIEKLMSELKTLKTELNETKNQISDLHNATKQQESQAQSMN 378
Query: 246 PRGTKQFRSTLSSLMRI 296
TK + L +++I
Sbjct: 379 DLLTKNSNNNLKMMLKI 395
>U58754-8|AAK72082.1| 325|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 13 protein.
Length = 325
Score = 27.1 bits (57), Expect = 5.2
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -1
Query: 227 LEGLTPSSFLIIQLISPITVFVLYLFPSR 141
LE T SSFL+I L+SP+ F+ ++ P R
Sbjct: 266 LEYFTFSSFLLIPLLSPLASFI-FVTPYR 293
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 39 IITSEPLKLEFLDQNGEIAVVLNENSQLLVEPLRARREKVEDE 167
I+T PL L+ + E A L++ V+ A R+++EDE
Sbjct: 65 IVTRRPLILQLIQDRNEYAEFLHKKGHRFVD-FDAVRKEIEDE 106
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 39 IITSEPLKLEFLDQNGEIAVVLNENSQLLVEPLRARREKVEDE 167
I+T PL L+ + E A L++ V+ A R+++EDE
Sbjct: 65 IVTRRPLILQLIQDRNEYAEFLHKKGHRFVD-FDAVRKEIEDE 106
>Z72502-9|CAE17688.1| 300|Caenorhabditis elegans Hypothetical
protein C08B6.12 protein.
Length = 300
Score = 26.6 bits (56), Expect = 6.9
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -1
Query: 131 FHEQLRVLVENDCYFSILVQEFE 63
F Q+ +++ NDCYF + + +F+
Sbjct: 130 FFRQMIIIIPNDCYFKMDLVQFQ 152
>U41532-4|AAK68320.1| 767|Caenorhabditis elegans Hypothetical
protein F11D5.3b protein.
Length = 767
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 257 EAVSLDVVFPDADHVYGIPEHTDGLAL 337
E ++ DVV PD+ + + EH DG ++
Sbjct: 328 ELLNDDVVIPDSVSYFSVTEHDDGTSM 354
>U41532-3|AAK68319.1| 797|Caenorhabditis elegans Hypothetical
protein F11D5.3a protein.
Length = 797
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 257 EAVSLDVVFPDADHVYGIPEHTDGLAL 337
E ++ DVV PD+ + + EH DG ++
Sbjct: 358 ELLNDDVVIPDSVSYFSVTEHDDGTSM 384
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 39 IITSEPLKLEFLDQNGEIAVVLNENSQLLVEPLRARREKVEDE 167
I+T PL L+ + E A L++ V+ A R+++EDE
Sbjct: 65 IVTRRPLILQLIQDRNEYAEFLHKKGHRFVD-FDAVRKEIEDE 106
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 39 IITSEPLKLEFLDQNGEIAVVLNENSQLLVEPLRARREKVEDE 167
I+T PL L+ + E A L++ V+ A R+++EDE
Sbjct: 65 IVTRRPLILQLIQDRNEYAEFLHKKGHRFVD-FDAVRKEIEDE 106
>AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 related
protein 1, isoform c protein.
Length = 756
Score = 26.6 bits (56), Expect = 6.9
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 63 LEFLDQNGEIAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEE 203
+E D+ + A VL E + E + + E ED + DG +DEE
Sbjct: 295 MEPADREAKEAKVLAEKVKKEEEEAKLKAEAEEDTENDGLTIAEDEE 341
>AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform d protein.
Length = 870
Score = 26.6 bits (56), Expect = 6.9
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 63 LEFLDQNGEIAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEE 203
+E D+ + A VL E + E + + E ED + DG +DEE
Sbjct: 295 MEPADREAKEAKVLAEKVKKEEEEAKLKAEAEEDTENDGLTIAEDEE 341
>AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform b protein.
Length = 870
Score = 26.6 bits (56), Expect = 6.9
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 63 LEFLDQNGEIAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEE 203
+E D+ + A VL E + E + + E ED + DG +DEE
Sbjct: 295 MEPADREAKEAKVLAEKVKKEEEEAKLKAEAEEDTENDGLTIAEDEE 341
>AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 related
protein 1, isoform a protein.
Length = 1022
Score = 26.6 bits (56), Expect = 6.9
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 63 LEFLDQNGEIAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEE 203
+E D+ + A VL E + E + + E ED + DG +DEE
Sbjct: 295 MEPADREAKEAKVLAEKVKKEEEEAKLKAEAEEDTENDGLTIAEDEE 341
>Z68114-4|CAA92159.1| 324|Caenorhabditis elegans Hypothetical
protein F17A2.6 protein.
Length = 324
Score = 26.2 bits (55), Expect = 9.1
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -1
Query: 203 FLIIQLISPITVFVLYLFPSRP*RFHEQLRVLVENDCYFSIL-VQEFEFERFGCYDDFMP 27
FLI LIS + FV+Y + + + LR ++ N C F ++ V +F + +P
Sbjct: 18 FLITSLISQL--FVIYFILNYTPKQLQTLRYILVNTCVFQVIHVSACYLMQFRQVSNLVP 75
Query: 26 LRV 18
+ V
Sbjct: 76 MEV 78
>U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical protein
C27A2.1 protein.
Length = 1076
Score = 26.2 bits (55), Expect = 9.1
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +3
Query: 42 ITSEPLKLEFLDQNGEIAVVLNENS-QLLVEPL---RARREKVEDEDGDGANQLDDEEGT 209
ITSE +L+ + +GE +++E ++L + L + R+EK+ + ++L DE
Sbjct: 839 ITSEKTRLKLAEDSGEDGSIVHEQRLKVLDDDLVLEKTRQEKLIENRARIHDKLGDEINN 898
Query: 210 WSETFQS 230
W + ++
Sbjct: 899 WRKEVET 905
>L10986-5|AAR25647.1| 171|Caenorhabditis elegans Hypothetical
protein F10E9.5 protein.
Length = 171
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 141 ARREKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPR 251
A+REK + + G+ A ++ E T + F+S + P+
Sbjct: 126 AKREKAKKDYGESATKILAMESTLAMKFESEYSQNPQ 162
>AC024759-4|AAK68434.1| 356|Caenorhabditis elegans Hypothetical
protein Y37E11AR.4 protein.
Length = 356
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 175 MGLISWMMRKELGVRPSSPITTPNLGARSSFAR 273
+GL WM + +G S+ +T N G S F +
Sbjct: 171 LGLKKWMKNQGIGADGSNTVTELNWGESSEFVK 203
>AC024200-10|AAF35999.1| 284|Caenorhabditis elegans Hypothetical
protein Y71F9AL.7 protein.
Length = 284
Score = 26.2 bits (55), Expect = 9.1
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 87 EIAVVLNENSQLLVEPLR--ARREKVEDEDGDGANQLDDEEGT 209
EIAVVL + + L R R +DEDGD + DDEE T
Sbjct: 79 EIAVVLKRDERFLRRHRRNPDRHLNWDDEDGD-EDDGDDEEDT 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,720,114
Number of Sequences: 27780
Number of extensions: 162644
Number of successful extensions: 632
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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