Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20518
         (407 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   1.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   1.3  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              23   1.8  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    22   2.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   5.4  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 125 EQLRVLVENDCYFSI 81
           EQLR+ +  DCY+ I
Sbjct: 313 EQLRIKILGDCYYCI 327


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 144 RREKVEDEDGDGANQLDDEE 203
           R  K    DG+GA+  DD+E
Sbjct: 265 RLRKRRQNDGEGADDRDDDE 284


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = -1

Query: 131 FHEQLRVLVENDCYFSILVQEFEFERFGCY 42
           FHE  ++   ++    ++ +E  F  +GC+
Sbjct: 42  FHELKKLRDSSEARIKLINEEENFRNYGCF 71


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
 Frame = +3

Query: 30  HKVIITSEPLKLEF---LDQNGEIAV----VLNENSQLLVEPLRARREK 155
           H V      +KL F    D N E+       +NENS+LL + L+A  E+
Sbjct: 179 HAVKFNPAKVKLRFENLFDGNKELGEQMNRFINENSELLFKELQAAYEE 227


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 331 GPEDDHVRRPVQAVQPGRLRIHIGQ 405
           GP+ DH  RP+   +   L + + Q
Sbjct: 540 GPKHDHQGRPISISKNQHLFVELDQ 564


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,459
Number of Sequences: 438
Number of extensions: 1945
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)