Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20515
         (554 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    28   0.047
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   3.1  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    22   4.1  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   5.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.5  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 28.3 bits (60), Expect = 0.047
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 111 KTQQWVTSKTHTLRPETPGPQPPS 182
           +T  W++S +  + P TP P PPS
Sbjct: 102 RTDDWLSSPSGNVPPLTPSPGPPS 125


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = +3

Query: 153  PETPGPQPPSPCNVRPCVKTVSLC*RVVHARLLKVHIQN 269
            P+  GPQP S C+          C R +H    K  + N
Sbjct: 1268 PKMGGPQPYSACSENAFAAYPGDCTRYLHCLWGKYEVFN 1306


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 143 VCLRCHPLLC 114
           +C+RCH  LC
Sbjct: 234 ICMRCHDQLC 243



 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +3

Query: 9   RRSHVSVDKYLSFIVKLY*IVIFLILSF 92
           R++ +  +KY +FI+  Y + +F+IL +
Sbjct: 312 RKTVLKTNKYCNFIILFY-LSVFVILVY 338


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2

Query: 251 ESPHPKPESTATLKFTWLGLISSMVKSMKISVPPHTT 361
           ESP P P+S AT       + SS + S   + PP TT
Sbjct: 9   ESPPPAPQSAAT------PISSSGMTSPAAAPPPATT 39


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 171 EAPESPVSKCVSSMSPIVV 115
           EAP  PV + + S++P+V+
Sbjct: 55  EAPCDPVGRRLKSLAPLVL 73



 Score = 20.6 bits (41), Expect = 9.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 394 QLTDISDDGYLTLMADNGDLREDLKIPDGD 483
           QLT ISD+   + + D   L   LK   G+
Sbjct: 26  QLTRISDEAIESTLNDRRYLLRQLKCATGE 55


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 215 FVMLKGRPCKIVESPHP 265
           F+ L   P KI+  PHP
Sbjct: 424 FMPLYSGPYKIIAKPHP 440


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +2

Query: 125 GDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVESP 259
           GD EDT   T +S AS   P + +A    G V     P  I E P
Sbjct: 30  GD-EDTGSMTPNSAASPAPPEEEAASPTPGDVPTPSSPRSISEDP 73


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 325 KKYEDICPSTHNMDV 369
           K YED CP++++  V
Sbjct: 665 KVYEDYCPTSNSGSV 679


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,588
Number of Sequences: 336
Number of extensions: 3314
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)