Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20514
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    55   5e-10
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    55   5e-10
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    52   3e-09
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    52   4e-09
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   2.3  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   5.2  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.1  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   9.1  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 55.2 bits (127), Expect = 5e-10
 Identities = 21/51 (41%), Positives = 33/51 (64%)
 Frame = +1

Query: 355 LYDPRDVEVILSSHVYIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAP 507
           +  P D E++LS+  +++K+  Y     WLG GLL STG KW++ RK++ P
Sbjct: 89  ILSPEDCELVLSNPTHMEKSAIYNLLHDWLGTGLLTSTGLKWQTRRKILTP 139



 Score = 36.7 bits (81), Expect = 2e-04
 Identities = 16/53 (30%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
 Frame = +3

Query: 510 FHLNVLKSFIELFNANSRAVVDKLKKEASN--FDCHDYMSECTVEILLETAMG 662
           FH ++L+ F+ +FN  +  +V+ LK+E      + + ++++ T++ + ETAMG
Sbjct: 141 FHFSILQQFVAIFNEETDKLVEVLKEECYKPFVNVNAHVAQFTLKTIAETAMG 193


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 55.2 bits (127), Expect = 5e-10
 Identities = 21/51 (41%), Positives = 33/51 (64%)
 Frame = +1

Query: 355 LYDPRDVEVILSSHVYIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAP 507
           +  P D E++LS+  +++K+  Y     WLG GLL STG KW++ RK++ P
Sbjct: 89  ILSPEDCELVLSNPTHMEKSAIYNLLHDWLGTGLLTSTGLKWQTRRKILTP 139



 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 16/53 (30%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
 Frame = +3

Query: 510 FHLNVLKSFIELFNANSRAVVDKLKKEASN--FDCHDYMSECTVEILLETAMG 662
           FH ++L+ F+ +FN  +  +V+ LK+E      + + ++++ T++ + ETAMG
Sbjct: 141 FHFSILQQFVAIFNEETDKLVEVLKEECYKPFINVNAHVAQFTLKTIAETAMG 193


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 52.4 bits (120), Expect = 3e-09
 Identities = 23/53 (43%), Positives = 32/53 (60%)
 Frame = +1

Query: 349 VFLYDPRDVEVILSSHVYIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAP 507
           V L +P DVE++L+      K+  Y F   WLG GLL S G KW++ RK++ P
Sbjct: 80  VNLLNPEDVELVLTDTKQNTKSFIYHFLHSWLGTGLLTSAGPKWQNRRKILTP 132



 Score = 36.7 bits (81), Expect = 2e-04
 Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
 Frame = +3

Query: 510 FHLNVLKSFIELFNANSRAVVDKLKKEASN--FDCHDYMSECTVEILLETAMGV 665
           FH N+L+ FI++FN  ++ +V+ L+ E      D    +++ T+  + ETAMG+
Sbjct: 134 FHFNILQEFIQIFNEETKRLVEDLEAECHKPYIDVVVPITQFTLLSIGETAMGI 187


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 52.0 bits (119), Expect = 4e-09
 Identities = 23/53 (43%), Positives = 32/53 (60%)
 Frame = +1

Query: 349 VFLYDPRDVEVILSSHVYIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAP 507
           V L +P DVE++L+      K+  Y F   WLG GLL S G KW++ RK++ P
Sbjct: 80  VNLLNPEDVELVLTDTKQNTKSFIYHFLHSWLGTGLLTSRGPKWQNRRKILTP 132



 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
 Frame = +3

Query: 510 FHLNVLKSFIELFNANSRAVVDKLKKEASN--FDCHDYMSECTVEILLETAMGV 665
           FH N+L+ FI++FN  ++ +V+ L+ E+     D    +++ T+  + ETAMG+
Sbjct: 134 FHFNILQEFIQIFNEETKRLVEDLEAESHKPYIDVVVPITQFTLLSIGETAMGI 187


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = +2

Query: 284 FRRALTTITNPSLRSG*DPVSSSFCT-ILATW 376
           FRR L    NPSLR G     +  C  +L  W
Sbjct: 23  FRRGLRLHDNPSLREGLKGARTFRCVFVLDPW 54


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 433 KPWLGNGLLISTGQKWRSHRKLIAP 507
           +P L   L    G+KW+  R  ++P
Sbjct: 69  EPLLSEALTNLPGEKWKEMRATLSP 93


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 258 STTNSRAFPSNGSPGGPFNLSASSY 184
           +TT + +   N +P   FN+S S+Y
Sbjct: 12  TTTTTTSSALNSTPLIEFNISTSNY 36


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 258 STTNSRAFPSNGSPGGPFNLSASSY 184
           +TT + +   N +P   FN+S S+Y
Sbjct: 12  TTTTTTSSALNSTPLIEFNISTSNY 36


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 531 SFIELFNANSRAVVDKLKKE 590
           +F+E  N + + V D LKKE
Sbjct: 168 AFLERENCHLKFVTDTLKKE 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,372
Number of Sequences: 336
Number of extensions: 2886
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)