Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20514
         (668 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...   127   1e-31
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    25   0.49 
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   2.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   6.1  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score =  127 bits (306), Expect = 1e-31
 Identities = 58/84 (69%), Positives = 71/84 (84%)
 Frame = +1

Query: 256 GSADIFRNIVQKSADYDHESVVKIWIGPRLLVFLYDPRDVEVILSSHVYIDKAEEYRFFK 435
           GS D   + V K A+ + + VVKIW+GP+L++ L DPRDVE+ILSS+VYIDK+ EYRFFK
Sbjct: 61  GSPDAMFSQVLKKAE-NFKDVVKIWVGPKLVICLIDPRDVEIILSSNVYIDKSTEYRFFK 119

Query: 436 PWLGNGLLISTGQKWRSHRKLIAP 507
           PWLG+GLLISTGQKWR+HRKLIAP
Sbjct: 120 PWLGDGLLISTGQKWRNHRKLIAP 143



 Score = 88.6 bits (210), Expect = 5e-20
 Identities = 41/54 (75%), Positives = 49/54 (90%), Gaps = 1/54 (1%)
 Frame = +3

Query: 510 FHLNVLKSFIELFNANSRAVVDKLKKE-ASNFDCHDYMSECTVEILLETAMGVS 668
           FHLNVLKSFI+LFNAN+R+VV+K++KE    FDCH+YMSE TV+ILLETAMGVS
Sbjct: 145 FHLNVLKSFIDLFNANARSVVEKMRKENGKEFDCHNYMSELTVDILLETAMGVS 198



 Score = 49.2 bits (112), Expect = 4e-08
 Identities = 29/72 (40%), Positives = 41/72 (56%)
 Frame = +2

Query: 98  FSAINLFYVLLVPAVILWYAYWRMSRRRLYELADKLNXXXXXXXXXNALEFVVDLLTSSE 277
           FSA ++F  LL+PA+IL++ Y+R+SRR L ELA+K+          NAL    DL  S +
Sbjct: 9   FSASSVFLSLLIPALILYFIYFRISRRHLLELAEKIPGPPALPLIGNAL----DLFGSPD 64

Query: 278 T*FRRALTTITN 313
             F + L    N
Sbjct: 65  AMFSQVLKKAEN 76


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 378 FHVARIVQK-DEETGSYPDLNDGFVIVVSALLNYVSEDVS 262
           FH  R++    +E+  YPDLN+ ++ ++S  L Y S  ++
Sbjct: 286 FHTQRLLYVYAQESDYYPDLNE-WLYILSGCLYYFSTTIN 324


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +2

Query: 284 FRRALTTITNPSLRSG*DPVSSSFCT-ILATW 376
           FR+ L    NPSLR G    S+  C  +L  W
Sbjct: 27  FRKGLRLHDNPSLREGLAGASTFRCVFVLDPW 58


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +1

Query: 559 QELLWTNLKKKPVIL 603
           +ELLWT++KK  +I+
Sbjct: 803 KELLWTSVKKALMIV 817


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +1

Query: 559 QELLWTNLKKKPVIL 603
           +ELLWT++KK  +I+
Sbjct: 841 KELLWTSVKKALMIV 855


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +2

Query: 98  FSAINLFYVLLVPAVILWYAYWRMSRRR 181
           +S+++ FY+  +  V L+Y  ++  R R
Sbjct: 346 YSSLSSFYIPCIIMVFLYYNIFKALRNR 373


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,599
Number of Sequences: 438
Number of extensions: 3485
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)