Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20513
(675 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 151 8e-37
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 151 8e-37
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 151 8e-37
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 148 8e-36
AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipp... 29 7.7
AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,... 29 7.7
AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,... 29 7.7
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 151 bits (366), Expect = 8e-37
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +1
Query: 250 KGDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 429
K DGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+
Sbjct: 71 KVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQ 130
Query: 430 TGPKNVPYLVTHDGRTIRYPDPLI 501
G K VP+LVTHDGRTIRYPDPLI
Sbjct: 131 LGAKGVPFLVTHDGRTIRYPDPLI 154
Score = 119 bits (286), Expect = 4e-27
Identities = 55/64 (85%), Positives = 58/64 (90%)
Frame = +3
Query: 42 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 221
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 222 S*KL 233
K+
Sbjct: 61 VTKI 64
Score = 74.1 bits (174), Expect = 2e-13
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = +3
Query: 486 PRPTYQSHDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 620
P P ++DS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT
Sbjct: 150 PDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGT 194
Score = 45.6 bits (103), Expect = 6e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2
Query: 602 LGACGHIVSRERHPGSFDIVHIKD 673
LG G +V+RERHPGSFDIVHIKD
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKD 212
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 151 bits (366), Expect = 8e-37
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +1
Query: 250 KGDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 429
K DGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+
Sbjct: 71 KVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQ 130
Query: 430 TGPKNVPYLVTHDGRTIRYPDPLI 501
G K VP+LVTHDGRTIRYPDPLI
Sbjct: 131 LGAKGVPFLVTHDGRTIRYPDPLI 154
Score = 119 bits (286), Expect = 4e-27
Identities = 55/64 (85%), Positives = 58/64 (90%)
Frame = +3
Query: 42 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 221
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 222 S*KL 233
K+
Sbjct: 61 VTKI 64
Score = 74.1 bits (174), Expect = 2e-13
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = +3
Query: 486 PRPTYQSHDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 620
P P ++DS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT
Sbjct: 150 PDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGT 194
Score = 45.6 bits (103), Expect = 6e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2
Query: 602 LGACGHIVSRERHPGSFDIVHIKD 673
LG G +V+RERHPGSFDIVHIKD
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKD 212
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 151 bits (366), Expect = 8e-37
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +1
Query: 250 KGDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 429
K DGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+
Sbjct: 71 KVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQ 130
Query: 430 TGPKNVPYLVTHDGRTIRYPDPLI 501
G K VP+LVTHDGRTIRYPDPLI
Sbjct: 131 LGAKGVPFLVTHDGRTIRYPDPLI 154
Score = 119 bits (286), Expect = 4e-27
Identities = 55/64 (85%), Positives = 58/64 (90%)
Frame = +3
Query: 42 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 221
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 222 S*KL 233
K+
Sbjct: 61 VTKI 64
Score = 74.1 bits (174), Expect = 2e-13
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = +3
Query: 486 PRPTYQSHDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 620
P P ++DS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT
Sbjct: 150 PDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGT 194
Score = 45.6 bits (103), Expect = 6e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2
Query: 602 LGACGHIVSRERHPGSFDIVHIKD 673
LG G +V+RERHPGSFDIVHIKD
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKD 212
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 148 bits (358), Expect = 8e-36
Identities = 64/81 (79%), Positives = 72/81 (88%)
Frame = +1
Query: 259 GKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 438
GKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G
Sbjct: 74 GKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGA 133
Query: 439 KNVPYLVTHDGRTIRYPDPLI 501
K VP+LVTHDGRTIRYPDPLI
Sbjct: 134 KGVPFLVTHDGRTIRYPDPLI 154
Score = 117 bits (281), Expect = 2e-26
Identities = 54/64 (84%), Positives = 57/64 (89%)
Frame = +3
Query: 42 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 221
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAE 60
Query: 222 S*KL 233
K+
Sbjct: 61 VTKI 64
Score = 74.1 bits (174), Expect = 2e-13
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = +3
Query: 486 PRPTYQSHDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 620
P P ++DS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT
Sbjct: 150 PDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGT 194
Score = 45.6 bits (103), Expect = 6e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2
Query: 602 LGACGHIVSRERHPGSFDIVHIKD 673
LG G +V+RERHPGSFDIVHIKD
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKD 212
>AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipped-B
protein.
Length = 2077
Score = 28.7 bits (61), Expect = 7.7
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -1
Query: 477 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 319
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
>AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,
isoform F protein.
Length = 2077
Score = 28.7 bits (61), Expect = 7.7
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -1
Query: 477 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 319
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
>AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,
isoform E protein.
Length = 2077
Score = 28.7 bits (61), Expect = 7.7
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -1
Query: 477 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 319
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,924,242
Number of Sequences: 53049
Number of extensions: 754603
Number of successful extensions: 1907
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1906
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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