Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20512
         (434 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein pro...    27   0.38 
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   1.2  
AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding pr...    23   3.6  
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       23   6.2  
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    23   6.2  
AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding pr...    23   6.2  

>AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein
           protein.
          Length = 182

 Score = 26.6 bits (56), Expect = 0.38
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -1

Query: 206 QPRDELRRERYYEAVGDDAELADGVEDAVPDADVGDALRHGAAEARE 66
           +P D+   +     + DDA   +G EDA  DA+  DA   GAA+  E
Sbjct: 46  RPADDTSDQESSTELSDDAGAEEGAEDAGSDAE-ADA---GAADGEE 88


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +2

Query: 269 ITVLEHPP--LNSTYGGTMCSFPGYWDYKNGKDYAHSTWYWHIIGATL 406
           I+ L+ PP  +  T+GG    F     Y   + +AH +W  H+   TL
Sbjct: 781 ISSLKQPPEEVFITFGGVNVPFSRSIKYLGVRVHAHLSWVPHVKEITL 828


>AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP35 protein.
          Length = 277

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = -2

Query: 265 EVCHVLLTY-CSSEPCVNAY 209
           E C V L   C+ EPCV AY
Sbjct: 108 ERCLVYLPQECNGEPCVQAY 127


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 95  LRHGAAEAREELARVQPHLQHVVDQREQRRQ 3
           L  G  E R ++ +V  H+  V  QR++RR+
Sbjct: 192 LTSGIFETRFQVDKVNFHMFDVGGQRDERRK 222


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 209 HQPRDELRRERYYEAVGDDAELADGVE 129
           H P  EL    Y + + ++ E  DG+E
Sbjct: 58  HNPGTELFEVCYQQCIYEELEAVDGLE 84


>AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP36 protein.
          Length = 277

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 238 CSSEPCVNAY 209
           C+ EPCV AY
Sbjct: 118 CNGEPCVQAY 127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 295,659
Number of Sequences: 2352
Number of extensions: 5910
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36142935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)