Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20512
         (434 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   2.0  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   2.0  
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    21   6.0  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    21   6.0  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    21   6.0  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    21   6.0  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    21   6.0  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   6.0  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   6.0  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   6.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.0  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 90  PQRVTDIGVWYRILDSIGKLSVI 158
           P R++  G++ R  + +GKLS I
Sbjct: 544 PSRISKQGLFRRFYNLLGKLSTI 566


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/30 (26%), Positives = 19/30 (63%)
 Frame = -1

Query: 92  RHGAAEAREELARVQPHLQHVVDQREQRRQ 3
           + G  +++ +   +Q H QH++ Q++Q+ Q
Sbjct: 182 QQGQHQSQAQQQHLQAHEQHMMYQQQQQSQ 211


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 284 HPPLNSTYGGT 316
           HPPLN  +G T
Sbjct: 163 HPPLNPRFGPT 173


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 284 HPPLNSTYGGT 316
           HPPLN  +G T
Sbjct: 163 HPPLNPRFGPT 173


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 284 HPPLNSTYGGT 316
           HPPLN  +G T
Sbjct: 163 HPPLNPRFGPT 173


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 284 HPPLNSTYGGT 316
           HPPLN  +G T
Sbjct: 163 HPPLNPRFGPT 173


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 284 HPPLNSTYGGT 316
           HPPLN  +G T
Sbjct: 167 HPPLNPRFGPT 177


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 284 HPPLNSTYGGT 316
           HPPLN  +G T
Sbjct: 172 HPPLNPRFGPT 182


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 284 HPPLNSTYGGT 316
           HPPLN  +G T
Sbjct: 172 HPPLNPRFGPT 182


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 284 HPPLNSTYGGT 316
           HPPLN  +G T
Sbjct: 172 HPPLNPRFGPT 182


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 9/55 (16%), Positives = 27/55 (49%)
 Frame = -1

Query: 239  LLQRAVRERVHQPRDELRRERYYEAVGDDAELADGVEDAVPDADVGDALRHGAAE 75
            ++Q+  +++  Q + + ++++  +     A   +GV   + +   G +   GAA+
Sbjct: 1207 MVQQQQQQQQQQQQQQQQQQQQQQQQQHQAREREGVGAGIAETSAGTSNSRGAAQ 1261


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,964
Number of Sequences: 438
Number of extensions: 1699
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)