Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20511
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    25   3.0  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.1  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   9.1  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   9.1  

>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +1

Query: 508 LQTKSTRRNRGNARQL*TNRCLRRIRQDYRHKNL*NMRNSR 630
           LQT ST  NR +  +  T R  RRI +D     +  + NSR
Sbjct: 117 LQTASTPHNRNSDPRPATGRKRRRIIEDSASPGVNKIVNSR 157


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +1

Query: 559 TNRCLRRI-RQDYRHKNL*NMRNSRILRFGPRQEYCNF 669
           T + L+R+ R  YRH      + SR + F     YC++
Sbjct: 410 TLKRLKRVKRAAYRHYQTRRCQRSRSIYFDTHSLYCSY 447


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 469 SCISKSFLCFTITLQSGNAASTNAFAV 389
           SC+  +FLC T+  +  N+     F+V
Sbjct: 517 SCLFGTFLCNTVKERQENSVPDRTFSV 543


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 469 SCISKSFLCFTITLQSGNAASTNAFAV 389
           SC+  +FLC T+  +  N+     F+V
Sbjct: 517 SCLFGTFLCNTVKERQENSVPDRTFSV 543


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,644
Number of Sequences: 2352
Number of extensions: 14518
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)