Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20509
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.34 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   2.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 222  CIIRSWPWLSTGGGRVLPETI 284
            C   +W W   G G+ LPE I
Sbjct: 1402 CYFTNWAWYRKGLGKYLPEDI 1422



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -1

Query: 299  CAQDGNSFRKDSSTPRREPRPTTDDASPP 213
            C  D +S    S+TP    +P T   S P
Sbjct: 2284 CHPDASSTMAPSTTPMVPDKPVTTTTSRP 2312



 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 18   WS*TSTSIWLGTTIQCSSSKSWCPDTNSTS 107
            WS T+TS W  TT     + +  P T ST+
Sbjct: 1043 WSSTTTSPW-WTTTTTRRTTTTRPTTTSTT 1071


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -1

Query: 344 GSTRSTFLRCYSFWTCAQDGNSFRKDSSTPRR 249
           G  +ST LR +S W+      S +  +  P R
Sbjct: 355 GDAQSTSLRPFSRWSLCNSARSNKYPTRVPHR 386



 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 135 HYT*TSRRYRCAT 173
           HYT +S+ YR AT
Sbjct: 333 HYTASSKNYRSAT 345


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 222 CIIRSWPWLSTGGGRVLPETIS 287
           C I SW     G G+  PE I+
Sbjct: 526 CYITSWSQKRPGAGKFTPEDIN 547


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,358
Number of Sequences: 336
Number of extensions: 4396
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)