Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20509
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73906-6|CAA98113.1|  824|Caenorhabditis elegans Hypothetical pr...    48   6e-06
U50068-5|AAB37734.1|  722|Caenorhabditis elegans Temporarily ass...    33   0.15 
AC024805-15|AAK39331.2|  344|Caenorhabditis elegans Hypothetical...    31   0.59 
AC006663-2|AAF39900.2|  603|Caenorhabditis elegans Hypothetical ...    30   1.8  
Z81513-10|CAB04183.1|  247|Caenorhabditis elegans Hypothetical p...    29   2.4  
U37429-16|AAA79341.1|  597|Caenorhabditis elegans Protein kinase...    29   3.2  
AF025666-1|AAB88885.1|  597|Caenorhabditis elegans protein kinas...    29   3.2  
Z81571-3|CAB04613.1|  352|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z81513-11|CAB04184.2|  254|Caenorhabditis elegans Hypothetical p...    28   5.5  
Z81044-12|CAB02811.2|  527|Caenorhabditis elegans Hypothetical p...    28   5.5  
Z75550-13|CAA99922.2|  111|Caenorhabditis elegans Hypothetical p...    28   5.5  
Z48543-4|CAE17720.1|  366|Caenorhabditis elegans Hypothetical pr...    28   5.5  
DQ015968-1|AAY81925.1|  366|Caenorhabditis elegans stargazin rel...    28   5.5  
AF016686-15|AAB66231.3|  572|Caenorhabditis elegans C-type lecti...    28   5.5  
Z36752-3|CAA85325.1|  422|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z83226-2|CAB05723.1|  211|Caenorhabditis elegans Hypothetical pr...    27   9.6  
U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical p...    27   9.6  
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical...    27   9.6  
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ...    27   9.6  
AF143151-1|AAD37917.1|  163|Caenorhabditis elegans heat shock pr...    27   9.6  

>Z73906-6|CAA98113.1|  824|Caenorhabditis elegans Hypothetical
           protein D2030.6 protein.
          Length = 824

 Score = 48.0 bits (109), Expect = 6e-06
 Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
 Frame = +3

Query: 318 SKKGTSGTPLDLLANYFTVETTPK-WGLYQYHVDISPEEDSTGVRKALMRVHSKT--LG- 485
           SK G+SG P    AN+  +E T   + +YQYHV+  P  DS   R+ ++R ++ T  +G 
Sbjct: 41  SKTGSSGQPQKCFANFIPIEMTQSDYSIYQYHVEFEPTVDSKANREKMLRDNNVTDEIGH 100

Query: 486 GYLFDGTVCTL 518
            ++FDG +  L
Sbjct: 101 HFVFDGMILYL 111


>U50068-5|AAB37734.1|  722|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 292 protein.
          Length = 722

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +3

Query: 390 WGLYQYHVDISPEEDSTGVRKALMRVHSKTL---GGYLFDGTVCTL 518
           + +YQYHV+  P  DS   R+ ++R  S T+     ++FDG +  L
Sbjct: 6   YSIYQYHVEFEPTVDSKATRENMLRQPSVTVEIGKHFVFDGMILYL 51


>AC024805-15|AAK39331.2|  344|Caenorhabditis elegans Hypothetical
           protein Y51H7C.13 protein.
          Length = 344

 Score = 31.5 bits (68), Expect = 0.59
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = -1

Query: 266 SSTPRREPRPTTDDASPPPDEWGPSSNFCMRCCTSISPGCS---CVVGVTRCEARPACAV 96
           ++ P  EP    +  + PP  W P  N      T  +PG S   C + +   +A  +C V
Sbjct: 159 NTPPAPEPTLPYEYTTQPPATWPPVENTTPEQPTVPTPGPSRECCYIDLRTLQATVSCGV 218

Query: 95  GVGT 84
            +GT
Sbjct: 219 AIGT 222


>AC006663-2|AAF39900.2|  603|Caenorhabditis elegans Hypothetical
           protein H24K24.4 protein.
          Length = 603

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 18/67 (26%), Positives = 33/67 (49%)
 Frame = -1

Query: 290 DGNSFRKDSSTPRREPRPTTDDASPPPDEWGPSSNFCMRCCTSISPGCSCVVGVTRCEAR 111
           D  S    +  PR EP PT  D +P P++  P +     CC + + G  C++   + +++
Sbjct: 406 DDPSDAPPAKIPRIEPEPTAADEAPAPED--PGTILLDICCGTGTIG-QCLLKNIQ-KSQ 461

Query: 110 PACAVGV 90
             C +G+
Sbjct: 462 KVCCIGI 468


>Z81513-10|CAB04183.1|  247|Caenorhabditis elegans Hypothetical
           protein F26D2.13 protein.
          Length = 247

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
 Frame = +3

Query: 27  TSTSIWLGTTIQCSSSKSWCPDTNSTSGSRLTPCY---SHYT*TSRRYRCATT 176
           +STS  + +T   SS  S+ PD++S+  S     +   + YT   RR  CATT
Sbjct: 191 SSTSTLISSTAISSSCTSYIPDSSSSCASWAANGFCTNNFYTIAGRRAVCATT 243


>U37429-16|AAA79341.1|  597|Caenorhabditis elegans Protein kinase c
           protein 3 protein.
          Length = 597

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -1

Query: 539 DQDADDLQCTNSAIKEISSECFTVNTHQCLSDSSAVFF 426
           D+D D +Q   S  +  S+  F V  H C    S +FF
Sbjct: 292 DEDIDWVQTEKSVFEAASNYPFLVGLHSCFQTESRLFF 329


>AF025666-1|AAB88885.1|  597|Caenorhabditis elegans protein kinase
           C3 protein.
          Length = 597

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -1

Query: 539 DQDADDLQCTNSAIKEISSECFTVNTHQCLSDSSAVFF 426
           D+D D +Q   S  +  S+  F V  H C    S +FF
Sbjct: 292 DEDIDWVQTEKSVFEAASNYPFLVGLHSCFQTESRLFF 329


>Z81571-3|CAB04613.1|  352|Caenorhabditis elegans Hypothetical
           protein M01G12.4 protein.
          Length = 352

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +2

Query: 536 DPMELYSDRKTDNERMRILIKLTCEVSLETITIY 637
           D ++ + D + DN    +L +LT ++SL ++T+Y
Sbjct: 5   DSVDYFYDEEEDNSTALVLCQLTDKISLVSMTLY 38


>Z81513-11|CAB04184.2|  254|Caenorhabditis elegans Hypothetical
           protein F26D2.14 protein.
          Length = 254

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +3

Query: 27  TSTSIWLGTTIQCSSSKSWCPDTNSTSGSRLTPCY---SHYT*TSRRYRCATT 176
           TS  I   TT   S+  S+ PD++S+  +     +   +HYT   R+  CATT
Sbjct: 198 TSARISSSTTSITSTCSSYNPDSSSSCAAWAANGFCTNTHYTVARRKATCATT 250


>Z81044-12|CAB02811.2|  527|Caenorhabditis elegans Hypothetical
           protein C30H6.5 protein.
          Length = 527

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -3

Query: 555 EYSSMGSGCRRFTVYKQCHQRDILRVFYCEHASVPFGLQCCLL 427
           E S +G G    T  +QC Q   L+ FYC   +  FGL+ C+L
Sbjct: 333 EESRIG-GVTLETCMRQCAQS--LQNFYCASINYSFGLKICIL 372


>Z75550-13|CAA99922.2|  111|Caenorhabditis elegans Hypothetical
           protein T22C1.4 protein.
          Length = 111

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 369 TVETTPKWGLYQYHVDISPEEDSTGVRKAL 458
           T+E TP+W   + H  ISP++D +   K L
Sbjct: 8   TLEGTPEWMAIELHGAISPQDDGSFDSKTL 37


>Z48543-4|CAE17720.1|  366|Caenorhabditis elegans Hypothetical
           protein C18D1.4 protein.
          Length = 366

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +3

Query: 405 YHVDISPEEDSTGVRKALMRVHSKTLGGYLFDGTVCTL*IVCILIPWSY-TLIVKQITNV 581
           Y  D  P + +T V++++ R     L G + DG    + I+C  +   Y +L++  + ++
Sbjct: 103 YLTDEEPSDTTTSVQQSVRRAFLFMLAGMILDGFGLFMAIICYCLKNPYASLLISSLLHI 162


>DQ015968-1|AAY81925.1|  366|Caenorhabditis elegans stargazin
           related protein STG-1 protein.
          Length = 366

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +3

Query: 405 YHVDISPEEDSTGVRKALMRVHSKTLGGYLFDGTVCTL*IVCILIPWSY-TLIVKQITNV 581
           Y  D  P + +T V++++ R     L G + DG    + I+C  +   Y +L++  + ++
Sbjct: 103 YLTDEEPSDTTTSVQQSVRRAFLFMLAGMILDGFGLFMAIICYCLKNPYASLLISSLLHI 162


>AF016686-15|AAB66231.3|  572|Caenorhabditis elegans C-type lectin
           protein 43 protein.
          Length = 572

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -1

Query: 266 SSTPRREPRPTTDDASPPPDE-WGPSSNFCMR 174
           S TP R P PT + + P P+  W    N C++
Sbjct: 171 SGTPTRAPTPTPNGSVPCPEGFWSYKDNTCLK 202


>Z36752-3|CAA85325.1|  422|Caenorhabditis elegans Hypothetical
           protein F35H8.3 protein.
          Length = 422

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = -1

Query: 338 TRSTFLRCYSFWTCAQDGNSFRKDSSTPRREPRPTTDDASPPPDEWGPSSNFCMRCCT 165
           TRST   C  F+T     ++ R   ST      P T D+ PPP++  P+       C+
Sbjct: 253 TRSTCQTCMRFFTTE---DALRHHQSTAH----PATFDSGPPPEDLLPNGKSARYSCS 303


>Z83226-2|CAB05723.1|  211|Caenorhabditis elegans Hypothetical
           protein F43D2.3 protein.
          Length = 211

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 307 SGRVRKMEIVSGRTLPPPVESHGQ 236
           S R+R+M +  G T+ PP  S+GQ
Sbjct: 55  SVRIRRMPVRYGSTMQPPATSNGQ 78


>U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical
           protein R151.7a protein.
          Length = 672

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +2

Query: 518 VNRLHPDPMELYSDRKTDNERMRILIKLTCEVSLETITIYKSLTSL*G 661
           VN  HP    +Y  RKTD E   IL +   + +L T  + K  + + G
Sbjct: 604 VNLTHPLVKAMYKMRKTDKETAAILAEQIYDNALITAGLIKDTSRMVG 651


>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
           protein Y39B6A.18 protein.
          Length = 1352

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +3

Query: 279 TISILRTRPEAVTSKKGTSGTPLDLLA-NYFTVETTPKWGLYQYHVDISPEEDSTGVRKA 455
           T+S L  R  ++ S+K TSG  L+L+     T +   +W    + +  + E D   +RK+
Sbjct: 258 TVSKLSDRLVSIPSRKYTSGFSLELIGLEQLTDDVKNQW---FFEMTNATEVDGQSIRKS 314

Query: 456 LMRVHS 473
           L  + S
Sbjct: 315 LKPIFS 320


>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
           protein Y80D3A.8 protein.
          Length = 1293

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +3

Query: 279 TISILRTRPEAVTSKKGTSGTPLDLLA-NYFTVETTPKWGLYQYHVDISPEEDSTGVRKA 455
           T+S L  R  ++ S+K TSG  L+L+     T +   +W    + +  + E D   +RK+
Sbjct: 304 TVSKLSDRLVSIPSRKYTSGFSLELIGLEQLTDDVKNQW---FFEMTNATEVDGQSIRKS 360

Query: 456 LMRVHS 473
           L  + S
Sbjct: 361 LKPIFS 366


>AF143151-1|AAD37917.1|  163|Caenorhabditis elegans heat shock
           protein 75 protein.
          Length = 163

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +2

Query: 518 VNRLHPDPMELYSDRKTDNERMRILIKLTCEVSLETITIYKSLTSL*G 661
           VN  HP    +Y  RKTD E   IL +   + +L T  + K  + + G
Sbjct: 95  VNLTHPLVKAMYKMRKTDKETAAILAEQIYDNALITAGLIKDTSRMVG 142


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,881,723
Number of Sequences: 27780
Number of extensions: 401099
Number of successful extensions: 1397
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1388
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)