Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20508
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 76 3e-14
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 76 3e-14
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 74 8e-14
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 62 3e-10
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 60 1e-09
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 60 1e-09
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 58 6e-09
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 58 6e-09
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 54 7e-08
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 48 6e-06
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 48 6e-06
At4g27080.1 68417.m03893 thioredoxin family protein contains Pfa... 46 3e-05
At3g20560.1 68416.m02603 thioredoxin family protein contains Pfa... 45 6e-05
At1g50950.1 68414.m05728 thioredoxin-related contains weak hit t... 42 3e-04
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 41 0.001
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 41 0.001
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 41 0.001
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 39 0.003
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 37 0.015
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 36 0.026
At3g16110.1 68416.m02035 thioredoxin family protein similar to p... 35 0.045
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 35 0.060
At3g19780.1 68416.m02504 expressed protein 33 0.14
At2g01270.1 68415.m00040 thioredoxin family protein low similari... 33 0.14
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 33 0.14
At1g15020.2 68414.m01795 thioredoxin family protein low similari... 32 0.42
At1g15020.1 68414.m01794 thioredoxin family protein low similari... 32 0.42
At1g08430.1 68414.m00932 expressed protein contains Pfam profile... 31 0.73
At4g37200.1 68417.m05266 thioredoxin family protein contains Pfa... 31 0.97
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 30 1.3
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 29 2.2
At5g37950.1 68418.m04571 hypothetical protein 29 2.2
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 29 2.2
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 29 2.2
At1g08440.1 68414.m00933 hypothetical protein contains Pfam prof... 29 2.2
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 29 3.0
At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2, chlorop... 29 3.0
At3g52510.1 68416.m05774 F-box family protein-related contains w... 29 3.9
At1g61970.1 68414.m06990 mitochondrial transcription termination... 29 3.9
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 28 5.2
At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / P... 28 5.2
At3g03860.1 68416.m00398 expressed protein 28 5.2
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 28 5.2
At1g62085.1 68414.m07006 mitochondrial transcription termination... 28 5.2
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 28 5.2
At2g16040.1 68415.m01839 hAT dimerisation domain-containing prot... 28 6.8
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 27 9.0
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 27 9.0
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 27 9.0
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '... 27 9.0
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '... 27 9.0
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Frame = +2
Query: 257 LKTDDPPVALAKVDCTEG-GKSTCEQFSVSGYPTLKIFRKG-ELSSEYNGPRESNGIVKY 430
L ++ PPV LAK+D +E + Q+ V G+PT+KIFR G + EYNGPRE+ GIV Y
Sbjct: 76 LSSNVPPVVLAKIDASEETNREFATQYEVQGFPTIKIFRNGGKAVQEYNGPREAEGIVTY 135
Query: 431 MRAQVGPSSKELLTVAD 481
++ Q GP+S E+ + D
Sbjct: 136 LKKQSGPASAEIKSADD 152
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 117 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 251
+E VL L ++F+ +++HD +V FYAPWCGHCK+L PEY AA
Sbjct: 29 KEFVLTLDHTNFTDTINKHDFIVVEFYAPWCGHCKQLAPEYEKAA 73
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 135 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKP 233
++DS VL+ L+ FYAPWCGHC++L P
Sbjct: 380 VSDSLDDIVLNSGKNVLLEFYAPWCGHCQKLAP 412
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Frame = +2
Query: 257 LKTDDPPVALAKVDCTEG-GKSTCEQFSVSGYPTLKIFRKG-ELSSEYNGPRESNGIVKY 430
L ++ PPV LAK+D +E + Q+ V G+PT+KIFR G + EYNGPRE+ GIV Y
Sbjct: 76 LSSNVPPVVLAKIDASEETNREFATQYEVQGFPTIKIFRNGGKAVQEYNGPREAEGIVTY 135
Query: 431 MRAQVGPSSKELLTVAD 481
++ Q GP+S E+ + D
Sbjct: 136 LKKQSGPASAEIKSADD 152
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 117 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 251
+E VL L ++F+ +++HD +V FYAPWCGHCK+L PEY AA
Sbjct: 29 KEFVLTLDHTNFTDTINKHDFIVVEFYAPWCGHCKQLAPEYEKAA 73
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 135 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKP 233
++DS VL+ L+ FYAPWCGHC++L P
Sbjct: 380 VSDSLDDIVLNSGKNVLLEFYAPWCGHCQKLAP 412
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 74.1 bits (174), Expect = 8e-14
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Frame = +2
Query: 257 LKTDDPPVALAKVDCTE-GGKSTCEQFSVSGYPTLKIFRKGELS-SEYNGPRESNGIVKY 430
L + +PP+ALAK+D +E K ++ + G+PTLKI R G S +YNGPRE+ GIV Y
Sbjct: 75 LSSHNPPLALAKIDASEEANKEFANEYKIQGFPTLKILRNGGKSVQDYNGPREAEGIVTY 134
Query: 431 MRAQVGPSSKEL 466
++ Q GP+S E+
Sbjct: 135 LKKQSGPASVEI 146
Score = 64.1 bits (149), Expect = 9e-11
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = +3
Query: 51 FEMFGSLKFVLLLGIIYLCKAAEED---VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCK 221
F+ F +LLL + +EE VL L S+F+ +S+HD +V FYAPWCGHC+
Sbjct: 3 FKGFACFSILLLLSLFVSSIRSEETKEFVLTLDHSNFTETISKHDFIVVEFYAPWCGHCQ 62
Query: 222 RLKPEYAVAA 251
+L PEY AA
Sbjct: 63 KLAPEYEKAA 72
Score = 38.7 bits (86), Expect = 0.004
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 159 VLSQHDTALVMFYAPWCGHCKRLKP 233
V L+ FYAPWCGHC++L P
Sbjct: 386 VFKSGKNVLIEFYAPWCGHCQKLAP 410
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 62.1 bits (144), Expect = 3e-10
Identities = 26/42 (61%), Positives = 30/42 (71%)
Frame = +3
Query: 126 VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 251
VL+LTDS+F + +S D V FYAPWCGHCKRL PE AA
Sbjct: 34 VLELTDSNFDSAISTFDCIFVDFYAPWCGHCKRLNPELDAAA 75
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/59 (27%), Positives = 35/59 (59%)
Frame = +2
Query: 275 PVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGP 451
P+ +AK++ + + + + +PTL ++ G + EY GPR+++ +V+Y++ V P
Sbjct: 84 PIVIAKLNADKYSR-LARKIEIDAFPTLMLYNHG-VPMEYYGPRKADLLVRYLKKFVAP 140
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/55 (49%), Positives = 33/55 (60%)
Frame = +3
Query: 75 FVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEY 239
F L + L A +DV+ LTD F + + ALV FYAPWCGHCK+L PEY
Sbjct: 8 FGFALLALLLVSAVADDVVVLTDDSFEKEVGKDKGALVEFYAPWCGHCKKLAPEY 62
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +2
Query: 278 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELS-SEYNGPRESNGIVKYMRAQVGPS 454
V +AKVDC E KS C ++ VSGYPT++ F KG L +Y GPR + + +Y+ + G +
Sbjct: 75 VLIAKVDCDEQ-KSVCTKYGVSGYPTIQWFPKGSLEPQKYEGPRNAEALAEYVNKEGGTN 133
Query: 455 SK 460
K
Sbjct: 134 VK 135
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 111 AAEEDVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 251
A ++V+ LT +F VL Q+ LV FYAPWCGHCK L P Y A
Sbjct: 138 AVPQNVVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVA 185
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +2
Query: 278 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRK-GELSSEYNGPRESNGIVKYMRAQVGPS 454
V +A +D + K+ E++ VSG+PTLK F K + +Y+G R+ + V ++ + G S
Sbjct: 194 VVIANLDA-DAHKALGEKYGVSGFPTLKFFPKDNKAGHDYDGGRDLDDFVSFINEKSGTS 252
Query: 455 --SKELLT 472
SK LT
Sbjct: 253 RDSKGQLT 260
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/55 (49%), Positives = 33/55 (60%)
Frame = +3
Query: 75 FVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEY 239
F L + L A +DV+ LTD F + + ALV FYAPWCGHCK+L PEY
Sbjct: 8 FGFALLALLLVSAVADDVVVLTDDSFEKEVGKDKGALVEFYAPWCGHCKKLAPEY 62
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +2
Query: 278 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELS-SEYNGPRESNGIVKYMRAQVGPS 454
V +AKVDC E KS C ++ VSGYPT++ F KG L +Y GPR + + +Y+ + G +
Sbjct: 75 VLIAKVDCDEQ-KSVCTKYGVSGYPTIQWFPKGSLEPQKYEGPRNAEALAEYVNKEGGTN 133
Query: 455 SK 460
K
Sbjct: 134 VK 135
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 111 AAEEDVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 251
A ++V+ LT +F VL Q+ LV FYAPWCGHCK L P Y A
Sbjct: 138 AVPQNVVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVA 185
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +2
Query: 278 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRK-GELSSEYNGPRESNGIVKYMRAQVGPS 454
V +A +D + K+ E++ VSG+PTLK F K + +Y+G R+ + V ++ + G S
Sbjct: 194 VVIANLDA-DAHKALGEKYGVSGFPTLKFFPKDNKAGHDYDGGRDLDDFVSFINEKSGTS 252
Query: 455 --SKELLT 472
SK LT
Sbjct: 253 RDSKGQLT 260
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 58.0 bits (134), Expect = 6e-09
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +3
Query: 117 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 251
E+DV+ + + +F+ V+ + LV FYAPWCGHC+ L PEYA AA
Sbjct: 102 EKDVVVIKERNFTDVIENNQYVLVEFYAPWCGHCQSLAPEYAAAA 146
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +2
Query: 278 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSS 457
V LAK+D TE + +++ V G+PTL F GE Y G R IV +++ ++GP
Sbjct: 154 VVLAKIDATEENE-LAQEYRVQGFPTLLFFVDGE-HKPYTGGRTKETIVTWVKKKIGPGV 211
Query: 458 KELLTVADFE 487
L T+ D E
Sbjct: 212 YNLTTLDDAE 221
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 117 EEDVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRLKPEY 239
+EDV + +F VL L+ YAPWCGHC+ L+P Y
Sbjct: 440 DEDVKIVVGDNFDEIVLDDSKDVLLEVYAPWCGHCQALEPMY 481
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 58.0 bits (134), Expect = 6e-09
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +3
Query: 117 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 251
E+DV+ + + +F+ V+ + LV FYAPWCGHC+ L PEYA AA
Sbjct: 102 EKDVVVIKERNFTDVIENNQYVLVEFYAPWCGHCQSLAPEYAAAA 146
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +2
Query: 278 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSS 457
V LAK+D TE + +++ V G+PTL F GE Y G R IV +++ ++GP
Sbjct: 154 VVLAKIDATEENE-LAQEYRVQGFPTLLFFVDGE-HKPYTGGRTKETIVTWVKKKIGPGV 211
Query: 458 KELLTVADFE 487
L T+ D E
Sbjct: 212 YNLTTLDDAE 221
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 117 EEDVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRLKPEY 239
+EDV + +F VL L+ YAPWCGHC+ L+P Y
Sbjct: 440 DEDVKIVVGDNFDEIVLDDSKDVLLEVYAPWCGHCQALEPMY 481
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 54.4 bits (125), Expect = 7e-08
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +3
Query: 117 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 251
E+DV LT +F+ + + A+V FYAPWCG C+ L PEYA AA
Sbjct: 98 EKDVAVLTKDNFTEFVGNNSFAMVEFYAPWCGACQALTPEYAAAA 142
Score = 54.4 bits (125), Expect = 7e-08
Identities = 25/75 (33%), Positives = 42/75 (56%)
Frame = +2
Query: 281 ALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSK 460
ALAK+D TE G +++ + G+PT+ +F GE+ Y G R +GIV +++ + PS
Sbjct: 150 ALAKIDATEEG-DLAQKYEIQGFPTVFLFVDGEMRKTYEGERTKDGIVTWLKKKASPSIH 208
Query: 461 ELLTVADFEAFTSKD 505
+ T + E S +
Sbjct: 209 NITTKEEAERVLSAE 223
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 123 DVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRLKPEY 239
DV + ++F VL + L+ YAPWCGHC+ +P Y
Sbjct: 438 DVKVIVGNNFDEIVLDESKDVLLEIYAPWCGHCQSFEPIY 477
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 126 VLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 251
V+ LT S+F S VL+ + LV F+APWCGHCK L P + A
Sbjct: 32 VVQLTASNFKSKVLNSNGVVLVEFFAPWCGHCKALTPTWEKVA 74
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +3
Query: 129 LDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 251
++L S+F V+ ++ +V F+APWCGHCK+L PE+ AA
Sbjct: 165 VELNASNFDDLVIESNELWIVEFFAPWCGHCKKLAPEWKRAA 206
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +2
Query: 284 LAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQV 445
+A +D + +S + + + G+PT+K+F G+ +Y G R++ I + Q+
Sbjct: 83 VAAIDA-DAHQSAAQDYGIKGFPTIKVFVPGKAPIDYQGARDAKSIANFAYKQI 135
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 126 VLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 251
VL LT S+F S VL+ + LV F+APWCGHC+ L P + A
Sbjct: 30 VLQLTPSNFKSKVLNSNGVVLVEFFAPWCGHCQSLTPTWEKVA 72
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/42 (42%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +3
Query: 129 LDLTDSDFSAVLSQH-DTALVMFYAPWCGHCKRLKPEYAVAA 251
++L S+F ++++ + +V F+APWCGHCK+L PE+ AA
Sbjct: 166 VELNSSNFDELVTESKELWIVEFFAPWCGHCKKLAPEWKKAA 207
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +2
Query: 284 LAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKE 463
+A +D + KS + + V G+PT+K+F G+ +Y G R++ I ++ Q+ K+
Sbjct: 81 VAAIDA-DAHKSVSQDYGVRGFPTIKVFVPGKPPIDYQGARDAKSISQFAIKQIKALLKD 139
Query: 464 LL 469
L
Sbjct: 140 RL 141
>At4g27080.1 68417.m03893 thioredoxin family protein contains Pfam
PF00085: Thioredoxin
Length = 480
Score = 45.6 bits (103), Expect = 3e-05
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Frame = +2
Query: 227 KARVRCSRRLLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKG-ELSSE---- 391
KA + R D V LAKVDCT+ G C + + GYP+++IFRKG +L +
Sbjct: 182 KAAKQIKERYDPEMDGRVILAKVDCTQEG-DLCRRNHIQGYPSIRIFRKGSDLKDDNAHH 240
Query: 392 ----YNGPRESNGIVKYMRAQVGP 451
Y G R++ +VK + + V P
Sbjct: 241 DHESYYGDRDTESLVKMVVSLVEP 264
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +3
Query: 120 EDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 251
ED + LT +F Q +V FYAPWC C LKP + AA
Sbjct: 141 EDSVPLTGRNFDTFTHQFPILVVNFYAPWCYWCNLLKPSWEKAA 184
>At3g20560.1 68416.m02603 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 483
Score = 44.8 bits (101), Expect = 6e-05
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Frame = +2
Query: 269 DPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSE---------YNGPRESNGI 421
D V L VDCTE + C++ + GYP+++IFRKG E Y G R+++ I
Sbjct: 196 DGRVLLGNVDCTEE-PALCKRNHIQGYPSIRIFRKGSDLREDHGHHEHESYYGDRDTDSI 254
Query: 422 VKYMRAQVGPSSKELLTVA 478
VK + V P E VA
Sbjct: 255 VKMVEGLVAPIHPETHKVA 273
Score = 35.1 bits (77), Expect = 0.045
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 120 EDVLDLTDSDFSAVLSQHDTALVM-FYAPWCGHCKRLKPEYAVAA 251
+ + LT + F A LS H LV+ F APWC RLKP + AA
Sbjct: 141 DGAIPLTSASFEA-LSHHFPILVVNFNAPWCYWSNRLKPSWEKAA 184
>At1g50950.1 68414.m05728 thioredoxin-related contains weak hit to
Pfam PF00085: Thioredoxin; contains 2 predicted
transmembrane domains
Length = 484
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Frame = +2
Query: 263 TDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSE---------YNGPRESN 415
TDD V L VDCTE + C+ + GYP+++IFR+G E Y G R+++
Sbjct: 196 TDDR-VLLGSVDCTEE-PTLCKSNHIQGYPSIRIFRRGSGLREDHGNHEHESYYGDRDTD 253
Query: 416 GIVKYMRAQVGPSSKE 463
+VK + + P KE
Sbjct: 254 SLVKMVEELLKPIKKE 269
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 129 LDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 251
+ LT + F +V FYAPWC RLKP + A+
Sbjct: 145 IPLTGAAFEKFTHHFQILVVNFYAPWCYWSNRLKPSWVKAS 185
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 78 VLLLGI-IYLCKAAEEDVLDLTDSDFSAVLSQHDTA-LVMFYAPWCGHCKRL 227
+LLL I I L KA +V+ LT FS + + DTA V F PWC HCK+L
Sbjct: 13 ILLLFIPIELVKA---EVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKL 61
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 269 DPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 433
D + + +VDC ++ C + + YPT +F GE S+Y G R+ + ++
Sbjct: 75 DDEIEVGEVDCGTS-RAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFV 128
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 78 VLLLGI-IYLCKAAEEDVLDLTDSDFSAVLSQHDTA-LVMFYAPWCGHCKRL 227
+LLL I I L KA +V+ LT FS + + DTA V F PWC HCK+L
Sbjct: 13 ILLLFIPIELVKA---EVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKL 61
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 269 DPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 433
D + + +VDC ++ C + + YPT +F GE S+Y G R+ + ++
Sbjct: 75 DDEIEVGEVDCGTS-RAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFV 128
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 78 VLLLGI-IYLCKAAEEDVLDLTDSDFSAVLSQHDTA-LVMFYAPWCGHCKRL 227
+LLL I I L KA +V+ LT FS + + DTA V F PWC HCK+L
Sbjct: 13 ILLLFIPIELVKA---EVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKL 61
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 269 DPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 433
D + + +VDC ++ C + + YPT +F GE S+Y G R+ + ++
Sbjct: 75 DDEIEVGEVDCGTS-RAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFV 128
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +3
Query: 111 AAEEDVLDLTDSDFSAVLSQHDT-ALVMFYAPWCGHCKRLKP 233
AA +V +L+DS++ + + D LV F+APWCG C+ + P
Sbjct: 83 AAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHP 124
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 102 LCKAAEE--DVLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRLKP 233
+C+A E D+ + DS + S VL +V F+APWCG CK + P
Sbjct: 72 VCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDP 118
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 114 AEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 251
A+ VL+L V+ ++ +V+ YAPWC L P +A AA
Sbjct: 75 AQRIVLELNGDYTKRVIDGNEFVMVLGYAPWCARSAELMPRFAEAA 120
>At3g16110.1 68416.m02035 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 534
Score = 35.1 bits (77), Expect = 0.045
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 114 AEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAA 251
A+ V++L + ++ ++ +V+ YAPWC L P +A AA
Sbjct: 73 AQRIVVELNGDNTKRLIDGNEYVMVLGYAPWCARSAELMPRFAEAA 118
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 34.7 bits (76), Expect = 0.060
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 90 GIIYLCKAAEEDVLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRLKP 233
G+I + + + DS + S VL + V F+APWCG CK + P
Sbjct: 64 GVICEAQDTATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDP 112
>At3g19780.1 68416.m02504 expressed protein
Length = 1014
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 69 LKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPE 236
L F++ + II L + + LT+ +FS+ + H L+ PWCG + LK E
Sbjct: 9 LPFLVFVSII-LPSSCHGEWEILTEQNFSSQIRLHPHVLLFVTTPWCGESRSLKYE 63
>At2g01270.1 68415.m00040 thioredoxin family protein low similarity
to quiescin [Homo sapiens] GI:13257405; contains Pfam
profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr
family
Length = 495
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 117 EEDVLDLTDSDFSAVLSQHDT--ALVMFYAPWCGHCKRLKPEYAVAA 251
++ ++L ++F +VL A+V F+A WC C+ KP Y A
Sbjct: 34 KDKAVELNTTNFDSVLKDTPAKYAVVEFFAHWCPACRNYKPHYEKVA 80
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 126 VLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRLKP 233
+ ++ +S+FS+ VL LV F A WCG CK + P
Sbjct: 71 IKEIGESEFSSTVLESAQPVLVEFVATWCGPCKLIYP 107
>At1g15020.2 68414.m01795 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 528
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 117 EEDVLDLTDSDFSAVLSQHDT--ALVMFYAPWCGHCKRLKPEYAVAA 251
+++ ++L ++F +V A++ F+A WC C+ KP Y A
Sbjct: 40 KDNAIELNATNFDSVFQDSPAKYAVLEFFAHWCPACRNYKPHYEKVA 86
>At1g15020.1 68414.m01794 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 502
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 117 EEDVLDLTDSDFSAVLSQHDT--ALVMFYAPWCGHCKRLKPEYAVAA 251
+++ ++L ++F +V A++ F+A WC C+ KP Y A
Sbjct: 40 KDNAIELNATNFDSVFQDSPAKYAVLEFFAHWCPACRNYKPHYEKVA 86
>At1g08430.1 68414.m00932 expressed protein contains Pfam profile
PF01027: Uncharacterized protein family UPF0005
Length = 493
Score = 31.1 bits (67), Expect = 0.73
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +3
Query: 21 VRFC*KAPAKFEMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALV--MF 194
VRF KF+ +G L F+L +I L +E+++DL +S S V+ + ++ +F
Sbjct: 124 VRFFPWVKTKFD-YGILIFILTFALISLSGFRDEEIMDLAESRLSTVVIGGVSCILISIF 182
Query: 195 YAP-WCG 212
P W G
Sbjct: 183 VCPVWAG 189
>At4g37200.1 68417.m05266 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; identical to cDNA
thioredoxin-like protein (hcf164 gene) GI;12049652
Length = 261
Score = 30.7 bits (66), Expect = 0.97
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +3
Query: 132 DLTDS--DFSAVLSQHDTALVMFYAPWCGHCKRLKPE 236
DLT S + LS +V FYA WC C+ L P+
Sbjct: 123 DLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPD 159
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 138 TDSDFSAVLSQHDT-ALVMFYAPWCGHCKRLKP 233
T + F +L D LV FYA WCG C+ + P
Sbjct: 64 TFNSFDDLLQNSDKPVLVDFYATWCGPCQLMVP 96
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = +3
Query: 108 KAAEEDVLDLTDSDF--SAVLSQHDTALVM-FYAPWCGHCKRLKPE 236
K+ ++L++ ++ ++L+ D +V+ FY+P CG CK L P+
Sbjct: 81 KSTNHNMLEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPK 126
>At5g37950.1 68418.m04571 hypothetical protein
Length = 351
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Frame = -3
Query: 507 SSLEVKASKSATVR--SSLELGPT-WARMYLTMPLDSLGPLYSEESSPFLKIFSVGYPDT 337
SS E + S + S LE+ W + L +P+ +GPLY S+P + +
Sbjct: 174 SSCEKGTASSMIINTVSCLEISSLEWLQQELKIPIYPIGPLYMVSSAPPTSLLD----EN 229
Query: 336 ENCSQVLLPPSVQSTLASATGGSSVFNSRR-LQRTLALVSYN 214
E+C L S + + G ++ ++ L+ LVS N
Sbjct: 230 ESCIDWLNKQKPSSVIYISLGSFTLLETKEVLEMASGLVSSN 271
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 108 KAAEEDVLDLTDSD--FSAVLSQHDTALVM-FYAPWCGHCKRLKPEYAVAA 251
+ A +++D+T ++ +A+ D +++ FY WCG C+ + P+ A
Sbjct: 89 RKAGPNMIDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTA 139
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/64 (28%), Positives = 25/64 (39%)
Frame = +3
Query: 42 PAKFEMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCK 221
P + G LKF L E DS +++ LV +YA WCG C+
Sbjct: 38 PVRRVRTGDLKFPSLSSTTRCTPRRIEAKKQTFDSFEDLLVNSDKPVLVDYYATWCGPCQ 97
Query: 222 RLKP 233
+ P
Sbjct: 98 FMVP 101
>At1g08440.1 68414.m00933 hypothetical protein contains Pfam profile
PF01027: Uncharacterized protein family UPF0005
Length = 501
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +3
Query: 21 VRFC*KAPAKFEMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALV--MF 194
VRF + A+++ +G L F+L +I + E+++LDL S V+ + ++ +F
Sbjct: 121 VRFFPRVKARYD-YGVLIFILTFALISVSGFREDEILDLAHKRLSTVIMGGVSCVLISIF 179
Query: 195 YAP-WCG 212
P W G
Sbjct: 180 VCPVWAG 186
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 144 SDFSAVLSQHDTALVMFYAPWCGHCKRLKPE 236
S +A+ + ++ F A WCG CK L+P+
Sbjct: 50 SRLNALKDTNKLLVIEFTAKWCGPCKTLEPK 80
>At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2,
chloroplast (APR2) (APSR) / adenosine 5'-phosphosulfate
5'-adenylylsulfate (APS) sulfotransferase 2 /
3'-phosphoadenosine-5'-phosphosulfate (PAPS) reductase
homolog 43 (PRH-43) identical to SP|P92981
5'-adenylylsulfate reductase 2, chloroplast precursor
(EC 1.8.4.9) (Adenosine 5'-phosphosulfate
5'-adenylylsulfate sulfotransferase 2) (APS
sulfotransferase 2) (Thioredoxin independent APS
reductase 2) (3'-phosphoadenosine-5'-phosphosulfate
reductase homolog 43) (PAPS reductase homolog 43)
(Prh-43) {Arabidopsis thaliana}; identical to cDNA PAPS
reductase homolog (PRH43) GI:1710115
Length = 454
Score = 29.1 bits (62), Expect = 3.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 183 LVMFYAPWCGHCKRLKPEY 239
LV+ YAPWC C+ ++ Y
Sbjct: 366 LVVLYAPWCPFCQAMEASY 384
>At3g52510.1 68416.m05774 F-box family protein-related contains weak
hit to TIGRFAM TIGR01640 : F-box protein interaction
domain
Length = 177
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -3
Query: 510 YSSLEVKASKSATVRSSLELGPTWARMYLTMPLDSLGPLYSEE 382
YS L V AS V ++ W++ L +PLD + ++ ++
Sbjct: 97 YSKLAVDASVDLRVMEDVKKKKKWSKKTLVLPLDQMNVVHGDD 139
>At1g61970.1 68414.m06990 mitochondrial transcription termination
factor-related / mTERF-related contains Pfam profile
PF02536: mTERF
Length = 418
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 531 KGI*PEREFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLY 659
K + P+ +FL++ E+T SS E+L K G+K V Y
Sbjct: 118 KSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYY 160
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 141 DSDFSAVLSQHDTALVM-FYAPWCGHCKRLKPEY 239
D+ + V + D +V+ Y WCG CK + P+Y
Sbjct: 86 DTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPKY 119
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/53 (22%), Positives = 24/53 (45%)
Frame = +2
Query: 290 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVG 448
K+DC + K ++ + PT KI + ++ E G + + + A+ G
Sbjct: 133 KLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVTGAKYEDLLAAIEAARSG 185
>At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / PAPS
reductase homolog (PRH19) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738756; identical to cDNA PAPS reductase homolog
(PRH19) GI:1710111
Length = 465
Score = 28.3 bits (60), Expect = 5.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 183 LVMFYAPWCGHCKRLKPEY 239
+V+ YAPWC C+ ++ Y
Sbjct: 377 IVVLYAPWCPFCQAMEASY 395
>At3g03860.1 68416.m00398 expressed protein
Length = 300
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 141 DSDFSAVLSQHDTAL--VMFYAPWCGHCKRLKPEY 239
DS + SQH A V+FYA WC + ++P++
Sbjct: 62 DSLDRLMASQHGNAYMSVLFYASWCPFSRAVRPKF 96
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 156 AVLSQHDTALVMFYAPWCGHCK 221
+VL LV FY WCG C+
Sbjct: 79 SVLKSETPVLVEFYTSWCGPCR 100
>At1g62085.1 68414.m07006 mitochondrial transcription termination
factor family protein / mTERF family protein contains
Pfam profile PF02536: mTERF
Length = 461
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 531 KGI*PEREFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLY 659
K I P+ +FL++ R E+T S+ E+L K G K + Y
Sbjct: 121 KSIGPKLQFLQSRGASRSELTHIVSTVPEILGKRGDKTISIYY 163
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 165 SQHDTALVMFYAPWCGHCKRLKP 233
SQ +VMF A WCG C+ + P
Sbjct: 225 SQTPHVMVMFTARWCGPCRDMIP 247
>At2g16040.1 68415.m01839 hAT dimerisation domain-containing protein
/ transposase-related low similarity to transposase
[Ipomoea purpurea] AB004906 GI:4063770
Length = 382
Score = 27.9 bits (59), Expect = 6.8
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Frame = -3
Query: 570 QLF*GTLFQVRFL--FEESDNHYSSLEVKASKSATVRSSLELGPTWARMYL---TMPLDS 406
Q+F G LF V+ L E+ + S ++++AS V S ++ + + L +P +
Sbjct: 256 QIF-GFLFGVKRLKVAEDDELRTSCMKLEASLKHDVHSDVDGEDLFMELKLLKDVLPKEI 314
Query: 405 LGPLYSEESSPFLKIFSVGYPDTENCSQVLLPPSVQSTLASATGGSSVFNSRRLQRTLA 229
P+ E FLKI YP+T ++LL V LA T + L+ T++
Sbjct: 315 TKPV---EVLKFLKIMDSCYPNTWIAYRILLTIPVSVALAERTFSKLKLIKKYLRSTMS 370
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 150 FSAVLSQHDTALVMFYAPWCGHCKRLKP 233
F+ + + +V F A WCG C+ ++P
Sbjct: 40 FNEIKESNKLLVVDFSASWCGPCRMIEP 67
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +2
Query: 260 KTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPR 406
K DD V K+DC + ++ + PT KI + ++ E G +
Sbjct: 115 KYDD--VVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVKEVTGAK 161
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 150 FSAVLSQHDTALVMFYAPWCGHCKRLKP 233
F ++ + ++ F A WCG CK ++P
Sbjct: 36 FDSMKGSNKLLVIDFTAVWCGPCKAMEP 63
>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 697 EESSNLFWSRLGRYKTTLFLYP 632
EES N+FWS+L K ++ YP
Sbjct: 807 EESPNIFWSKLLGGKNPMWKYP 828
>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 697 EESSNLFWSRLGRYKTTLFLYP 632
EES N+FWS+L K ++ YP
Sbjct: 807 EESPNIFWSKLLGGKNPMWKYP 828
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,985,742
Number of Sequences: 28952
Number of extensions: 305332
Number of successful extensions: 962
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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