Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20507
(645 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 171 9e-42
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 148 1e-34
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 143 3e-33
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 136 6e-31
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 102 9e-21
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 95 1e-18
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 89 8e-17
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 86 6e-16
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 83 4e-15
UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_030012... 82 1e-14
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 80 4e-14
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 78 2e-13
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 78 2e-13
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 64 2e-09
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 54 2e-06
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 46 0.001
UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n... 40 0.068
UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7; n... 34 2.6
UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7; n... 34 3.4
UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor; ... 33 4.5
UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_Q7SDK2 Cluster: Putative uncharacterized protein NCU027... 33 7.8
UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit... 33 7.8
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 171 bits (417), Expect = 9e-42
Identities = 83/89 (93%), Positives = 85/89 (95%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 423
+K VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPL
Sbjct: 85 KKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPL 144
Query: 424 RRVNQAIWLLCTGAREAAFRNIKTIAECV 510
RRVNQAIWLLCTGAREAAFRNIKTIAEC+
Sbjct: 145 RRVNQAIWLLCTGAREAAFRNIKTIAECL 173
Score = 146 bits (355), Expect = 3e-34
Identities = 65/79 (82%), Positives = 73/79 (92%)
Frame = +2
Query: 17 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 196
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 197 VERLTNSLMMHGRNNGKKL 253
VERLTNS+MMHGRNNGKKL
Sbjct: 69 VERLTNSMMMHGRNNGKKL 87
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ADELINAAKGSSNSYAIKKKDELERVAKSNR 602
ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 174 ADELINAAKGSSNSYAIKKKDELERVAKSNR 204
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 148 bits (359), Expect = 1e-34
Identities = 69/89 (77%), Positives = 81/89 (91%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 423
+K AVRI+KHA EIIHLLT +NP+QV+V A++NSGPRED+TRIG AG VRRQAVD+SPL
Sbjct: 78 KKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPL 137
Query: 424 RRVNQAIWLLCTGAREAAFRNIKTIAECV 510
RRVNQAI+LL TGAREAAFRNIK+IAEC+
Sbjct: 138 RRVNQAIYLLTTGAREAAFRNIKSIAECL 166
Score = 119 bits (286), Expect = 7e-26
Identities = 56/73 (76%), Positives = 63/73 (86%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 EIKLFGRWSCYDVQVSDMSLQDYISV-KEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTN 214
E+KLF RWS DVQ+SD+SL DYI V K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67
Query: 215 SLMMHGRNNGKKL 253
SLMMHGRNNGKKL
Sbjct: 68 SLMMHGRNNGKKL 80
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ADELINAAKGSSNSYAIKKKDELERVAKSNR 602
ADELINAAKGSSNSYAIKKKDE+ERVAK+NR
Sbjct: 167 ADELINAAKGSSNSYAIKKKDEIERVAKANR 197
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 143 bits (347), Expect = 3e-33
Identities = 68/76 (89%), Positives = 72/76 (94%)
Frame = +1
Query: 283 EIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG 462
++ HLL +NPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG
Sbjct: 174 QLQHLLLAQNPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG 233
Query: 463 AREAAFRNIKTIAECV 510
AREAAFRNIKTIAEC+
Sbjct: 234 AREAAFRNIKTIAECL 249
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ADELINAAKGSSNSYAIKKKDELERVAKSNR 602
ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 250 ADELINAAKGSSNSYAIKKKDELERVAKSNR 280
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 136 bits (328), Expect = 6e-31
Identities = 67/89 (75%), Positives = 76/89 (85%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 423
+K A RIVKHAFEII LLT +NPLQVLV A+ GPREDSTRIG AGTVRRQAVDVSPL
Sbjct: 84 KKLLATRIVKHAFEIIALLTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQAVDVSPL 143
Query: 424 RRVNQAIWLLCTGAREAAFRNIKTIAECV 510
RRVNQA+ L+ GAREAAFRN+K+I+EC+
Sbjct: 144 RRVNQALALITIGAREAAFRNVKSISECL 172
Score = 88.2 bits (209), Expect = 1e-16
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = +2
Query: 41 IKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSL 220
IKLF ++ V+V D+SL DYI++ + LPH+AGR+ KRFRKA+C IVERLTNSL
Sbjct: 18 IKLFNKFPFEGVEVKDISLVDYITIGN--GQPLPHTAGRFQTKRFRKARCFIVERLTNSL 75
Query: 221 MMHGRNNGKKL 253
MM+GRNNGKKL
Sbjct: 76 MMNGRNNGKKL 86
Score = 61.7 bits (143), Expect = 1e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ADELINAAKGSSNSYAIKKKDELERVAKSNR 602
A+E+INAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 173 AEEIINAAKGSSNSYAIKKKDELERVAKSNR 203
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 102 bits (244), Expect = 9e-21
Identities = 51/89 (57%), Positives = 67/89 (75%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 423
+K A+ I + A IIH +T +NPLQVLV AI+NSGPRED+ RIGRAG++RR +VDVSPL
Sbjct: 89 KKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPREDTARIGRAGSMRRTSVDVSPL 148
Query: 424 RRVNQAIWLLCTGAREAAFRNIKTIAECV 510
+R++ AI L G R A+FRN T+AE +
Sbjct: 149 KRISIAISNLSAGIRNASFRNRITLAEAI 177
Score = 57.2 bits (132), Expect = 3e-07
Identities = 30/71 (42%), Positives = 45/71 (63%)
Frame = +2
Query: 38 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 217
EI LF ++S +V+V+++SL+ YI++ + +PH+A KA+ PI ER S
Sbjct: 22 EINLFEKYSYEEVKVNNVSLRPYINLSRR--GIVPHAATTITKGTTGKARIPIAERFVCS 79
Query: 218 LMMHGRNNGKK 250
LM HGRN+GKK
Sbjct: 80 LMRHGRNSGKK 90
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +3
Query: 510 ADELINAAKGSSNSYAIKKKDELERVAKSNR 602
A+ELI A+ S NSYA+ KK E+ER+A+SNR
Sbjct: 178 ANELIAASTNSQNSYAVNKKKEIERIAQSNR 208
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 95.5 bits (227), Expect = 1e-18
Identities = 41/86 (47%), Positives = 63/86 (73%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 423
+K + + IVKHAF ++H TG+NP+Q+LV AI N P EDS + +G +R+AVDVSP
Sbjct: 88 KKIKTIAIVKHAFYLLHKTTGKNPIQLLVDAISNCAPHEDSLMLSNSGQKKREAVDVSPY 147
Query: 424 RRVNQAIWLLCTGAREAAFRNIKTIA 501
R+++QAI+ + G ++AAF+N K+I+
Sbjct: 148 RKISQAIYFIAVGTKKAAFKNPKSIS 173
Score = 82.2 bits (194), Expect = 1e-14
Identities = 33/73 (45%), Positives = 52/73 (71%)
Frame = +2
Query: 38 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 217
++K+F RW V+++D+S+ +YI +KY + +PHS+G Y K F+K CPI+ERL S
Sbjct: 19 KMKVFNRWELEKVKINDISISNYIYFNKKYGELVPHSSGNYDKKPFKKTYCPILERLVCS 78
Query: 218 LMMHGRNNGKKLR 256
LM+ RN+GKK++
Sbjct: 79 LMLKSRNSGKKIK 91
Score = 36.3 bits (80), Expect = 0.63
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +3
Query: 513 DELINAAKGSSNSYAIKKKDELERVA 590
DE++NAA+ S+ SYAIKKK +LE+ A
Sbjct: 178 DEILNAARNSNTSYAIKKKLDLEKNA 203
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 89.0 bits (211), Expect = 8e-17
Identities = 46/89 (51%), Positives = 61/89 (68%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 423
+K A IVK AF+IIH TGENP+QVLV A+ N+ PRE++T I G +AVD SP
Sbjct: 78 KKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPREETTTIIYGGISYHEAVDSSPQ 137
Query: 424 RRVNQAIWLLCTGAREAAFRNIKTIAECV 510
RR++ A+ L+ GA++ AFRN K I EC+
Sbjct: 138 RRLDIALRLITEGAQQRAFRNPKPIEECL 166
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/75 (50%), Positives = 50/75 (66%)
Frame = +2
Query: 38 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 217
E+K+FG+W +V+V D L+DYI +K Y LPH+ GR+A KRF KA+ PIVERL N
Sbjct: 12 EMKVFGKWDPTEVEVRDPGLKDYICLKPMY---LPHTGGRHAKKRFAKAEVPIVERLINR 68
Query: 218 LMMHGRNNGKKLRPY 262
+M +N GKK Y
Sbjct: 69 VMRTEKNTGKKHLAY 83
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 86.2 bits (204), Expect = 6e-16
Identities = 43/89 (48%), Positives = 59/89 (66%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 423
+K +A IVK AF++I+ TG+NPLQV + AIIN+ PRE+ TRI G +VDVSP
Sbjct: 104 KKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPREEITRIIMGGIAYSVSVDVSPQ 163
Query: 424 RRVNQAIWLLCTGAREAAFRNIKTIAECV 510
RR++ A+ + GAR +F N K I EC+
Sbjct: 164 RRLDLALRWITEGARACSFNNPKPIEECL 192
Score = 74.1 bits (174), Expect = 3e-12
Identities = 39/74 (52%), Positives = 47/74 (63%)
Frame = +2
Query: 41 IKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSL 220
I LFG+WS DV V D L+ YI +K LPH+ GRY + RF KA+ PIVERL N +
Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLKPVI---LPHTEGRYQNTRFGKARIPIVERLINLM 95
Query: 221 MMHGRNNGKKLRPY 262
M GRN GKK + Y
Sbjct: 96 MRPGRNTGKKHKAY 109
Score = 38.7 bits (86), Expect = 0.12
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +3
Query: 510 ADELINAAKGSSNSYAIKKKDELERVAKSNR 602
ADE+I AA SYA++K++ELER+A ++R
Sbjct: 193 ADEIIAAAANDPKSYAVRKREELERIAAASR 223
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 83.4 bits (197), Expect = 4e-15
Identities = 40/89 (44%), Positives = 60/89 (67%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 423
+K +A++IV+ AF+I+H T ENP+QVLV+A+ N+ PRE++ R+ G QAVD +P
Sbjct: 91 KKQQALKIVRDAFDIVHERTDENPIQVLVSAVENAAPREETVRLKYGGISVPQAVDTAPQ 150
Query: 424 RRVNQAIWLLCTGAREAAFRNIKTIAECV 510
RRV+QA+ L GA A+F+ AE +
Sbjct: 151 RRVDQALKFLADGAHSASFKTPTDAAEAL 179
Score = 59.3 bits (137), Expect = 8e-08
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = +2
Query: 44 KLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 223
KLFG+W ++ D S + Y++V + H+ GR+A K+F+K++ IVERL N LM
Sbjct: 29 KLFGKWDVAEIHYEDPSTRRYLAVTP-----VAHTMGRHAQKQFKKSEISIVERLANRLM 83
Query: 224 MHGRNNGKK 250
G N GKK
Sbjct: 84 KTGANAGKK 92
>UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_03001272;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001272 - Ferroplasma acidarmanus fer1
Length = 182
Score = 81.8 bits (193), Expect = 1e-14
Identities = 43/110 (39%), Positives = 71/110 (64%), Gaps = 2/110 (1%)
Frame = +1
Query: 214 LSNDARSEQW--QKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 387
L+N R+E+W +K A +++ AF+II T +NP+Q+LV+AI NS PRE+ TR+ G
Sbjct: 51 LNNLMRTEKWTGKKYSAYKVMSQAFDIIATKTKQNPVQILVSAIENSAPREEVTRLKYGG 110
Query: 388 TVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVQMN*LMQLR 537
++VDVSP RR+++A+ + GA +A+F++ I +C+ L+ R
Sbjct: 111 IAVPKSVDVSPSRRLDEALRNIARGATKASFKHKIHIQDCLANEILLAAR 160
Score = 38.7 bits (86), Expect = 0.12
Identities = 17/31 (54%), Positives = 25/31 (80%)
Frame = +3
Query: 510 ADELINAAKGSSNSYAIKKKDELERVAKSNR 602
A+E++ AA+ +NS+AI KK+E+ERVA S R
Sbjct: 152 ANEILLAARNDANSFAISKKEEIERVAASAR 182
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 80.2 bits (189), Expect = 4e-14
Identities = 39/89 (43%), Positives = 59/89 (66%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 423
+K E + I++ A I+ T ENP+QV+V A+ NSGPRE++TRI G Q+VDVSP
Sbjct: 74 KKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGIAFLQSVDVSPS 133
Query: 424 RRVNQAIWLLCTGAREAAFRNIKTIAECV 510
RR++ A + GA + A ++ K+IA+C+
Sbjct: 134 RRLDTAFRNISLGASQGAHKSKKSIAQCL 162
Score = 61.3 bits (142), Expect = 2e-08
Identities = 33/71 (46%), Positives = 42/71 (59%)
Frame = +2
Query: 38 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 217
EIKLFG+W V V D SL+ +IS+ +PH+AGR + K F K + +VERL N
Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISLNPVL---IPHTAGRNSKKMFDKNKMHVVERLANK 64
Query: 218 LMMHGRNNGKK 250
LM N GKK
Sbjct: 65 LMATQVNTGKK 75
Score = 35.9 bits (79), Expect = 0.84
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = +3
Query: 510 ADELINAAKGS-SNSYAIKKKDELERVAKSNR 602
ADEL+ A+K S+A+KKK+E ERVA+S R
Sbjct: 163 ADELVAASKADMQKSFAVKKKEEKERVAQSAR 194
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/89 (41%), Positives = 59/89 (66%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 423
+K +R V+ AF+I++ T +NP+QVLV AI N+GPRE+ R+ G +AVD +P
Sbjct: 70 KKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPKAVDTAPQ 129
Query: 424 RRVNQAIWLLCTGAREAAFRNIKTIAECV 510
RRV+ A+ + G AAF++ +++AEC+
Sbjct: 130 RRVDTALRYISMGTNAAAFKSKRSVAECL 158
Score = 62.9 bits (146), Expect = 6e-09
Identities = 28/69 (40%), Positives = 46/69 (66%)
Frame = +2
Query: 44 KLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 223
K+FG+W +V+V D+ ++ Y+S+ +PHS+G++A ++F K++ IVERL N+LM
Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSLTPVI---VPHSSGKHARQQFNKSEISIVERLANNLM 62
Query: 224 MHGRNNGKK 250
N GKK
Sbjct: 63 RTETNTGKK 71
Score = 33.1 bits (72), Expect = 5.9
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3
Query: 510 ADELINAAKGSSNSYAIKKKDELERVAKSNR 602
A ELI AA + S++I +KD ERVAK+ R
Sbjct: 159 ATELIGAANRDTKSFSINRKDAKERVAKAAR 189
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 77.8 bits (183), Expect = 2e-13
Identities = 42/103 (40%), Positives = 61/103 (59%)
Frame = +1
Query: 202 APYKLSNDARSEQWQKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGR 381
A + + + RS +K A +VK AF+II TG+NP+QVLV AI N+ PRED+T +
Sbjct: 85 AGHFMRREHRSLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSVMF 144
Query: 382 AGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECV 510
G AVD+SPLRR++ A+ + GA +R + AE +
Sbjct: 145 GGIRYHVAVDISPLRRLDVALRNIALGASAKCYRTKMSFAEAL 187
Score = 65.7 bits (153), Expect = 9e-10
Identities = 34/70 (48%), Positives = 46/70 (65%)
Frame = +2
Query: 38 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 217
EIK+ GRWS DV+V D SL+ YI+++ + LPH+ GR+A K F KA IVERL N
Sbjct: 17 EIKVMGRWSTEDVEVKDPSLKPYINLEPRL---LPHTHGRHAKKHFGKANVHIVERLINK 73
Query: 218 LMMHGRNNGK 247
+M G ++ K
Sbjct: 74 VMRSGGSHYK 83
Score = 33.9 bits (74), Expect = 3.4
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3
Query: 510 ADELINAAKGSSNSYAIKKKDELERVAKSNR 602
A+E+I AA SYA KK E+ER+A+S+R
Sbjct: 188 AEEIILAANKDPKSYAYSKKLEIERIAESSR 218
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 64.5 bits (150), Expect = 2e-09
Identities = 33/83 (39%), Positives = 54/83 (65%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 423
+K A+ IV+ AFE+I+ T NP++VLV AI N+GPRE++ R+ G ++VD +PL
Sbjct: 85 KKQLAIGIVRDAFELINKKTKRNPIEVLVEAIGNTGPREETVRLKYGGINVPKSVDTAPL 144
Query: 424 RRVNQAIWLLCTGAREAAFRNIK 492
RRV+ AI + +++ ++ K
Sbjct: 145 RRVDSAIGFIAEAVWKSSRKSKK 167
Score = 60.5 bits (140), Expect = 3e-08
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 ETMSLPQAADIPEIK--LFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 175
E + P+ P+ K LF +W +V+V+D SL Y+++ + +PHS G+++ + F
Sbjct: 5 EVKAQPEGDAAPQSKALLFNKWDVSEVKVTDPSLVRYVNLTPQI---IPHSCGKFSRQEF 61
Query: 176 RKAQCPIVERLTNSLMMHGRNNGKK 250
KA IVERL N LM N GKK
Sbjct: 62 NKANMMIVERLINRLMQTENNTGKK 86
Score = 41.1 bits (92), Expect = 0.022
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +3
Query: 504 VCADELINAAKGSSNSYAIKKKDELERVAKSNR 602
+ ADELI A+KG + Y++ KK+E ER+AKS R
Sbjct: 172 ILADELIAASKGDAKCYSVGKKEEKERIAKSAR 204
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +2
Query: 182 AQCPIVERLTNSLMMHGRNNGKKL 253
AQCPIVERLTNS+MMHGRNNGKKL
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKL 24
Score = 41.1 bits (92), Expect = 0.022
Identities = 22/31 (70%), Positives = 23/31 (74%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTA 336
+K VRIVKHAFEIIHLLTGE L LV A
Sbjct: 22 KKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 48.0 bits (109), Expect = 2e-04
Identities = 19/37 (51%), Positives = 28/37 (75%)
Frame = +2
Query: 2 ETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYIS 112
E + Q A++P+IKLFGRWS D+ +SD+S+ DYI+
Sbjct: 19 EQAPVVQPAELPDIKLFGRWSSDDIHISDISVSDYIA 55
Score = 47.2 bits (107), Expect = 3e-04
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 537 GSSNSYAIKKKDELERVAKSNR 602
GSSNSYAIKKKDELERVAKSNR
Sbjct: 56 GSSNSYAIKKKDELERVAKSNR 77
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -1
Query: 261 YGLSFLPLFRPCIIREFVRRSTIGHWALRKRLCAYLPAE*GKYFAY 124
Y FLP+F P I F+ ST+G W L KRLC+ LP G+Y +
Sbjct: 10 YARCFLPMFLPGRITLFISLSTMGTWVLPKRLCSCLPPVCGRYTGF 55
>UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Odontella sinensis|Rep: Chloroplast 30S ribosomal
protein S7 - Odontella sinensis (Marine centric diatom)
Length = 158
Score = 39.5 bits (88), Expect = 0.068
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP--REDSTRIGRAGTVRRQAVDVS 417
+K A IV AFEII + T E+PL V AI N+ P + RIG G+ + V+VS
Sbjct: 35 KKNLAQNIVNAAFEIIKVKTNEDPLVVFERAIRNASPVVEVKARRIG--GSTYQVPVEVS 92
Query: 418 PLRRVNQAI-WLL 453
R N ++ W++
Sbjct: 93 GFRATNLSLRWII 105
>UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7;
n=22; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Guillardia theta (Cryptomonas phi)
Length = 156
Score = 34.3 bits (75), Expect = 2.6
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Frame = +1
Query: 235 EQWQKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRED--STRIGRAGTVRRQAV 408
++ +K A RI+ +AF+II TGE+ + V +AI P + + RIG G+ + +
Sbjct: 32 KEGKKHLAQRIIYNAFDIIKQRTGEDAILVFESAIKKVTPLVEVKARRIG--GSTYQVPM 89
Query: 409 DVSPLRRVNQAIWLLCTGAREAAFRNI 489
+V R N A+ + ARE A +++
Sbjct: 90 EVRAFRGTNLALRWITKYARERAGKSM 116
>UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7;
n=191; Magnoliophyta|Rep: Chloroplast 30S ribosomal
protein S7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 155
Score = 33.9 bits (74), Expect = 3.4
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +3
Query: 510 ADELINAAKGSSNSYAIKKKDELERVAKSNR 602
+ EL++AAKGS + AI+KK+E R+A++NR
Sbjct: 121 SSELVDAAKGSGD--AIRKKEETHRMAEANR 149
>UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor;
n=1; Desulfuromonas acetoxidans DSM 684|Rep: Multicopper
oxidase, type 3 precursor - Desulfuromonas acetoxidans
DSM 684
Length = 782
Score = 33.5 bits (73), Expect = 4.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 335 PLSTLDPVKIRLGSVVRVQFVVKPLMFHP 421
PLS D ++IR G VVR V + +M+HP
Sbjct: 507 PLSAGDDIRIRQGEVVRFMMVNRTMMYHP 535
>UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 589
Score = 33.1 bits (72), Expect = 5.9
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +1
Query: 229 RSEQWQKTEAVRIVKHAFEIIHLLTGENP--LQVLVTAIINSGPREDSTRIG 378
R +Q+QK V++ KH FEI+H + G P + VL T +++S R+ + IG
Sbjct: 487 RQKQYQKFLHVKM-KHVFEILHSIEGNKPYTMTVLSTLVVDS-LRDGNNPIG 536
>UniRef50_Q7SDK2 Cluster: Putative uncharacterized protein NCU02793.1;
n=1; Neurospora crassa|Rep: Putative uncharacterized
protein NCU02793.1 - Neurospora crassa
Length = 10820
Score = 32.7 bits (71), Expect = 7.8
Identities = 17/66 (25%), Positives = 36/66 (54%)
Frame = +1
Query: 199 GAPYKLSNDARSEQWQKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIG 378
G PY+ + ++S++ +K + + KH ++ GE+P L A++ + PRE+ + G
Sbjct: 4916 GVPYRRGSKSKSDKGEKGDKAKD-KHQQQV-----GEDPTSELEHAVLKTTPREEDEQTG 4969
Query: 379 RAGTVR 396
+ +R
Sbjct: 4970 NSPQIR 4975
>UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit
S7; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S7 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 32.7 bits (71), Expect = 7.8
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 354
+K +A +IV A II TGENP+ VL AI P
Sbjct: 138 KKAKAEKIVATALSIIQKETGENPIDVLKQAIAEISP 174
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,885,566
Number of Sequences: 1657284
Number of extensions: 13092499
Number of successful extensions: 32000
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 30685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31950
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -