Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20507
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   3.8  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   5.0  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   5.0  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   5.0  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 556  PSKRRTSWSVLLN 594
            PSK R  W+VLLN
Sbjct: 1118 PSKIRICWNVLLN 1130


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/36 (19%), Positives = 20/36 (55%)
 Frame = +1

Query: 190 PNRGAPYKLSNDARSEQWQKTEAVRIVKHAFEIIHL 297
           PN+   Y ++ +++ +    +   R+ K  FE++++
Sbjct: 475 PNQKHIYYITGESKEQVANSSFVERVKKRGFEVVYM 510


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 311 FSPVNK*IISNACLTIRTASVFCHCSDRASL 219
           F  +   + S  CL +    VFC CS +ASL
Sbjct: 280 FKEIGLLVDSTYCLFL--LFVFCDCSHQASL 308


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 311 FSPVNK*IISNACLTIRTASVFCHCSDRASL 219
           F  +   + S  CL +    VFC CS +ASL
Sbjct: 280 FKEIGLLVDSTYCLFL--LFVFCDCSHQASL 308


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 311 FSPVNK*IISNACLTIRTASVFCHCSDRASL 219
           F  +   + S  CL +    VFC CS +ASL
Sbjct: 280 FKEIGLLVDSTYCLFL--LFVFCDCSHQASL 308


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,826
Number of Sequences: 336
Number of extensions: 3297
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)