Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20507
(645 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 171 1e-42
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 171 1e-42
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 171 1e-42
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 171 1e-42
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 171 1e-42
AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5 pr... 64 4e-10
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 54 3e-07
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 34 0.38
D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein. 31 3.5
BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592... 31 3.5
BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592... 31 3.5
BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592... 31 3.5
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 31 3.5
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 31 3.5
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 31 3.5
AK127866-1|BAC87168.1| 204|Homo sapiens protein ( Homo sapiens ... 30 8.1
AK126695-1|BAC86646.1| 398|Homo sapiens protein ( Homo sapiens ... 30 8.1
AK023048-1|BAB14374.1| 171|Homo sapiens protein ( Homo sapiens ... 30 8.1
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 171 bits (417), Expect = 1e-42
Identities = 83/89 (93%), Positives = 85/89 (95%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 423
+K VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPL
Sbjct: 85 KKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPL 144
Query: 424 RRVNQAIWLLCTGAREAAFRNIKTIAECV 510
RRVNQAIWLLCTGAREAAFRNIKTIAEC+
Sbjct: 145 RRVNQAIWLLCTGAREAAFRNIKTIAECL 173
Score = 142 bits (344), Expect = 1e-33
Identities = 63/79 (79%), Positives = 71/79 (89%)
Frame = +2
Query: 17 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 196
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA FRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANAFRKAQCPI 68
Query: 197 VERLTNSLMMHGRNNGKKL 253
VERLTNS+MMHGRNNGKKL
Sbjct: 69 VERLTNSMMMHGRNNGKKL 87
Score = 64.1 bits (149), Expect = 4e-10
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ADELINAAKGSSNSYAIKKKDELERVAKSNR 602
ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 174 ADELINAAKGSSNSYAIKKKDELERVAKSNR 204
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 171 bits (417), Expect = 1e-42
Identities = 83/89 (93%), Positives = 85/89 (95%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 423
+K VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPL
Sbjct: 85 KKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPL 144
Query: 424 RRVNQAIWLLCTGAREAAFRNIKTIAECV 510
RRVNQAIWLLCTGAREAAFRNIKTIAEC+
Sbjct: 145 RRVNQAIWLLCTGAREAAFRNIKTIAECL 173
Score = 146 bits (355), Expect = 4e-35
Identities = 65/79 (82%), Positives = 73/79 (92%)
Frame = +2
Query: 17 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 196
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 197 VERLTNSLMMHGRNNGKKL 253
VERLTNS+MMHGRNNGKKL
Sbjct: 69 VERLTNSMMMHGRNNGKKL 87
Score = 64.1 bits (149), Expect = 4e-10
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ADELINAAKGSSNSYAIKKKDELERVAKSNR 602
ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 174 ADELINAAKGSSNSYAIKKKDELERVAKSNR 204
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 171 bits (417), Expect = 1e-42
Identities = 83/89 (93%), Positives = 85/89 (95%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 423
+K VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPL
Sbjct: 85 KKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPL 144
Query: 424 RRVNQAIWLLCTGAREAAFRNIKTIAECV 510
RRVNQAIWLLCTGAREAAFRNIKTIAEC+
Sbjct: 145 RRVNQAIWLLCTGAREAAFRNIKTIAECL 173
Score = 146 bits (355), Expect = 4e-35
Identities = 65/79 (82%), Positives = 73/79 (92%)
Frame = +2
Query: 17 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 196
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 197 VERLTNSLMMHGRNNGKKL 253
VERLTNS+MMHGRNNGKKL
Sbjct: 69 VERLTNSMMMHGRNNGKKL 87
Score = 64.1 bits (149), Expect = 4e-10
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ADELINAAKGSSNSYAIKKKDELERVAKSNR 602
ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 174 ADELINAAKGSSNSYAIKKKDELERVAKSNR 204
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 171 bits (417), Expect = 1e-42
Identities = 83/89 (93%), Positives = 85/89 (95%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 423
+K VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPL
Sbjct: 85 KKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPL 144
Query: 424 RRVNQAIWLLCTGAREAAFRNIKTIAECV 510
RRVNQAIWLLCTGAREAAFRNIKTIAEC+
Sbjct: 145 RRVNQAIWLLCTGAREAAFRNIKTIAECL 173
Score = 146 bits (355), Expect = 4e-35
Identities = 65/79 (82%), Positives = 73/79 (92%)
Frame = +2
Query: 17 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 196
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 197 VERLTNSLMMHGRNNGKKL 253
VERLTNS+MMHGRNNGKKL
Sbjct: 69 VERLTNSMMMHGRNNGKKL 87
Score = 60.5 bits (140), Expect = 5e-09
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +3
Query: 510 ADELINAAKGSSNSYAIKKKDELERVAKSNR 602
ADELINAAKGSSN YAIKK+DELERVAKSNR
Sbjct: 174 ADELINAAKGSSNFYAIKKRDELERVAKSNR 204
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 171 bits (417), Expect = 1e-42
Identities = 83/89 (93%), Positives = 85/89 (95%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPL 423
+K VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPL
Sbjct: 85 KKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPL 144
Query: 424 RRVNQAIWLLCTGAREAAFRNIKTIAECV 510
RRVNQAIWLLCTGAREAAFRNIKTIAEC+
Sbjct: 145 RRVNQAIWLLCTGAREAAFRNIKTIAECL 173
Score = 146 bits (355), Expect = 4e-35
Identities = 65/79 (82%), Positives = 73/79 (92%)
Frame = +2
Query: 17 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 196
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 197 VERLTNSLMMHGRNNGKKL 253
VERLTNS+MMHGRNNGKKL
Sbjct: 69 VERLTNSMMMHGRNNGKKL 87
Score = 64.1 bits (149), Expect = 4e-10
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ADELINAAKGSSNSYAIKKKDELERVAKSNR 602
ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 174 ADELINAAKGSSNSYAIKKKDELERVAKSNR 204
>AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5
protein.
Length = 55
Score = 64.1 bits (149), Expect = 4e-10
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ADELINAAKGSSNSYAIKKKDELERVAKSNR 602
ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 25 ADELINAAKGSSNSYAIKKKDELERVAKSNR 55
Score = 53.6 bits (123), Expect = 6e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +1
Query: 439 AIWLLCTGAREAAFRNIKTIAECV 510
AIWLLCTGAREAAFRNIKTIAEC+
Sbjct: 1 AIWLLCTGAREAAFRNIKTIAECL 24
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 54.4 bits (125), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +2
Query: 182 AQCPIVERLTNSLMMHGRNNGKKL 253
AQCPIVERLTNS+MMHGRNNGKKL
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKL 24
Score = 41.1 bits (92), Expect = 0.003
Identities = 22/31 (70%), Positives = 23/31 (74%)
Frame = +1
Query: 244 QKTEAVRIVKHAFEIIHLLTGENPLQVLVTA 336
+K VRIVKHAFEIIHLLTGE L LV A
Sbjct: 22 KKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 34.3 bits (75), Expect = 0.38
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 245 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 153
C C + ++ E G R G G YG AC H C
Sbjct: 1423 CSCHNNSTCEPATGTCRCGPGFYGQACEHPC 1453
>D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein.
Length = 1317
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 98 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLRPY 262
Q+++ +E Y ++ S GR KR+ QC NSL H RNN ++ +
Sbjct: 1039 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNNHDTVKKF 1092
>BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 98 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLRPY 262
Q+++ +E Y ++ S GR KR+ QC NSL H RNN ++ +
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNNHDTVKKF 1042
>BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 98 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLRPY 262
Q+++ +E Y ++ S GR KR+ QC NSL H RNN ++ +
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNNHDTVKKF 1042
>BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 98 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLRPY 262
Q+++ +E Y ++ S GR KR+ QC NSL H RNN ++ +
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNNHDTVKKF 1042
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 3.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 245 CHCSDRASLESL*GAPRLGTGLYGNACVH 159
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 3.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 245 CHCSDRASLESL*GAPRLGTGLYGNACVH 159
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 31.1 bits (67), Expect = 3.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 245 CHCSDRASLESL*GAPRLGTGLYGNACVH 159
C C + ++ E G R G G YG AC H
Sbjct: 1130 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1158
>AK127866-1|BAC87168.1| 204|Homo sapiens protein ( Homo sapiens
cDNA FLJ45969 fis, clone PLACE7016454. ).
Length = 204
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 504 LCDCFNISECSLTCTCAQKPDCLVDSAQG*NINGL 400
LC C ++ C+ C C K C S Q ++NG+
Sbjct: 45 LCVCVHVCICACICACVWKFPCRNHSVQTESLNGV 79
>AK126695-1|BAC86646.1| 398|Homo sapiens protein ( Homo sapiens
cDNA FLJ44741 fis, clone BRACE3027931. ).
Length = 398
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 72 MCKSLICLCRTTFPLKRSTQNIYLIQLA 155
+CKS C+C +T + ST+ Y QLA
Sbjct: 259 VCKSTYCICNSTHCVCNSTRTAYATQLA 286
>AK023048-1|BAB14374.1| 171|Homo sapiens protein ( Homo sapiens
cDNA FLJ12986 fis, clone NT2RP3000055. ).
Length = 171
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 72 MCKSLICLCRTTFPLKRSTQNIYLIQLA 155
+CKS C+C +T + ST+ Y QLA
Sbjct: 32 VCKSTYCICNSTHCVCNSTRTAYATQLA 59
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,103,193
Number of Sequences: 237096
Number of extensions: 1963764
Number of successful extensions: 3641
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3641
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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