Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20507
(645 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 25 0.47
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 25 0.47
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 25 0.47
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 25 0.47
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 25 0.47
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 25 0.83
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 25 0.83
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 25 0.83
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 23 3.3
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 7.7
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 21 7.7
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 25.4 bits (53), Expect = 0.47
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 116 KEKYAKYLPHSAGRYAHK--RFRKAQCPIVERLTNSLMMHGRNNGKKLRPY 262
+ Y KY S R + R R + I+ L+N + + NN KKL+ Y
Sbjct: 53 ENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYY 103
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 25.4 bits (53), Expect = 0.47
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 116 KEKYAKYLPHSAGRYAHK--RFRKAQCPIVERLTNSLMMHGRNNGKKLRPY 262
+ Y KY S R + R R + I+ L+N + + NN KKL+ Y
Sbjct: 53 ENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYY 103
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 25.4 bits (53), Expect = 0.47
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 116 KEKYAKYLPHSAGRYAHK--RFRKAQCPIVERLTNSLMMHGRNNGKKLRPY 262
+ Y KY S R + R R + I+ L+N + + NN KKL+ Y
Sbjct: 53 ENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYY 103
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 25.4 bits (53), Expect = 0.47
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 116 KEKYAKYLPHSAGRYAHK--RFRKAQCPIVERLTNSLMMHGRNNGKKLRPY 262
+ Y KY S R + R R + I+ L+N + + NN KKL+ Y
Sbjct: 53 ENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYY 103
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 25.4 bits (53), Expect = 0.47
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 116 KEKYAKYLPHSAGRYAHK--RFRKAQCPIVERLTNSLMMHGRNNGKKLRPY 262
+ Y KY S R + R R + I+ L+N + + NN KKL+ Y
Sbjct: 286 ENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYY 336
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 24.6 bits (51), Expect = 0.83
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -1
Query: 318 QRVFSS*QVNNFKRMFDNTYGLSFLPLF--RPCIIREFVRRSTIGHWAL 178
Q V S N + +F T + LF + +++E +R+ GHW +
Sbjct: 33 QEVKQSFLKNQLQALFQPTDNKLAMKLFGSKKALMKERIRQKAAGHWVI 81
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 24.6 bits (51), Expect = 0.83
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -1
Query: 318 QRVFSS*QVNNFKRMFDNTYGLSFLPLF--RPCIIREFVRRSTIGHWAL 178
Q V S N + +F T + LF + +++E +R+ GHW +
Sbjct: 33 QEVKQSFLKNQLQALFQPTDNKLAMKLFGSKKALMKERIRQKAAGHWVI 81
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 24.6 bits (51), Expect = 0.83
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -1
Query: 318 QRVFSS*QVNNFKRMFDNTYGLSFLPLF--RPCIIREFVRRSTIGHWAL 178
Q V S N + +F T + LF + +++E +R+ GHW +
Sbjct: 33 QEVKQSFLKNQLQALFQPTDNKLAMKLFGSKKALMKERIRQKAAGHWVI 81
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 22.6 bits (46), Expect = 3.3
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = -2
Query: 638 LFIVKMT**YILTVGFSNTLQLVLLFDGVG-VR*TLSC---IN*FICTHSAIVLIFLNAA 471
+F +++ +LTVG ++ LF G+G +SC + + AI F++
Sbjct: 34 MFFMELALGQMLTVGGLGVFKIAPLFKGIGYAAAVMSCWMNVYYIVILAWAIFYFFMSMR 93
Query: 470 SRAPVHKSQIAWLTR 426
S P W T+
Sbjct: 94 SELPWGSCNNYWNTK 108
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.4 bits (43), Expect = 7.7
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 265 IVKHAFEIIHLLTGENPLQVLVTAII 342
+++HAFEI +L P+ +++ I
Sbjct: 217 LIEHAFEISTMLFFVLPMTIIIVLYI 242
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.4 bits (43), Expect = 7.7
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1
Query: 216 EFVRRSTIGHWALRKRLCAYLPAE 145
EF R T AL K+LC PAE
Sbjct: 585 EFPRSITRNATALIKKLCRDNPAE 608
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,772
Number of Sequences: 438
Number of extensions: 3603
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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