Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20506
(701 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 146 3e-36
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 146 3e-36
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 134 1e-32
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 117 2e-27
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 83 4e-17
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 72 7e-14
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 68 1e-12
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 45 1e-05
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 30 0.37
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 2.0
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 3.4
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 3.4
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 27 3.4
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 4.5
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy... 26 4.5
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 4.5
SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces p... 25 7.9
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 25 7.9
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 146 bits (354), Expect = 3e-36
Identities = 69/86 (80%), Positives = 80/86 (93%)
Frame = +1
Query: 1 IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL 180
IDFYTSITRARFEEL ADLFR+TMEPVEK LRD+K+DK+ +++IVLVGGSTRIP++QKL+
Sbjct: 289 IDFYTSITRARFEELCADLFRNTMEPVEKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLV 348
Query: 181 QDFFNGKELNKSINPDEAVAYGAAVR 258
DFFNGKE KSINPDEAVAYGAAV+
Sbjct: 349 SDFFNGKEPCKSINPDEAVAYGAAVQ 374
Score = 118 bits (283), Expect = 1e-27
Identities = 55/64 (85%), Positives = 60/64 (93%)
Frame = +2
Query: 509 LTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVN 688
L+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEEI+RMV+
Sbjct: 459 LSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVS 518
Query: 689 EAEK 700
EAEK
Sbjct: 519 EAEK 522
Score = 98.7 bits (235), Expect = 7e-22
Identities = 53/88 (60%), Positives = 56/88 (63%)
Frame = +3
Query: 255 QAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQ 434
QAAIL GD SE+ QD GIETAGGVMT LIKRN Y+DNQ
Sbjct: 374 QAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSEVFSTYADNQ 433
Query: 435 PGVLIQVFEGERAMTKDNNLLGKFD*PG 518
PGVLIQVFEGERA TKD NLLGKF+ G
Sbjct: 434 PGVLIQVFEGERARTKDCNLLGKFELSG 461
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 146 bits (354), Expect = 3e-36
Identities = 70/86 (81%), Positives = 79/86 (91%)
Frame = +1
Query: 1 IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL 180
IDFYTSITRARFEEL ADLFR TMEPVE+ LRD+K+DKA +++IVLVGGSTRIP+VQKL+
Sbjct: 289 IDFYTSITRARFEELCADLFRKTMEPVERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLV 348
Query: 181 QDFFNGKELNKSINPDEAVAYGAAVR 258
DFFNGKE KSINPDEAVAYGAAV+
Sbjct: 349 SDFFNGKEPCKSINPDEAVAYGAAVQ 374
Score = 116 bits (280), Expect = 2e-27
Identities = 55/64 (85%), Positives = 59/64 (92%)
Frame = +2
Query: 509 LTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVN 688
L+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEEI+RMV
Sbjct: 459 LSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVA 518
Query: 689 EAEK 700
EAEK
Sbjct: 519 EAEK 522
Score = 99 bits (238), Expect = 3e-22
Identities = 53/88 (60%), Positives = 56/88 (63%)
Frame = +3
Query: 255 QAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQ 434
QAA+L GD SE+ QD GIETAGGVMT LIKRN YSDNQ
Sbjct: 374 QAAVLTGDTSEKTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQ 433
Query: 435 PGVLIQVFEGERAMTKDNNLLGKFD*PG 518
PGVLIQVFEGERA TKD NLLGKF+ G
Sbjct: 434 PGVLIQVFEGERARTKDCNLLGKFELSG 461
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 134 bits (324), Expect = 1e-32
Identities = 61/86 (70%), Positives = 77/86 (89%)
Frame = +1
Query: 1 IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL 180
IDF +SITRARFE++NA F++T++PV K L+D+K+ KA +HDIVLVGGSTRIPKVQ+L+
Sbjct: 293 IDFSSSITRARFEDINATTFKATIDPVAKVLKDSKVPKADVHDIVLVGGSTRIPKVQRLV 352
Query: 181 QDFFNGKELNKSINPDEAVAYGAAVR 258
DFF+G+ LNKSINPDEAVAYGAAV+
Sbjct: 353 SDFFDGRALNKSINPDEAVAYGAAVQ 378
Score = 78.2 bits (184), Expect = 1e-15
Identities = 34/65 (52%), Positives = 47/65 (72%)
Frame = +2
Query: 506 RLTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMV 685
+LTGIPP PRG ++E TF++DANGIL V+A+EK+T + I ITN G LS +I+ M+
Sbjct: 463 QLTGIPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHLSSTKIQEMI 522
Query: 686 NEAEK 700
A+K
Sbjct: 523 ENADK 527
Score = 37.5 bits (83), Expect = 0.002
Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Frame = +3
Query: 255 QAAILHGDK-SEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDN 431
QAA+L S++ QD G+ G V + RN +DN
Sbjct: 378 QAAVLTNKADSDKTQDLLLLDVVPLSLGVAMEGNVFGVVCPRNTPIPTIKKRTFTTVADN 437
Query: 432 QPGVLIQVFEGERAMTKDNNLLGKFD*PG 518
Q V V++GER +N LG+F G
Sbjct: 438 QTTVTFPVYQGERVNCAENEPLGEFQLTG 466
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 117 bits (281), Expect = 2e-27
Identities = 54/85 (63%), Positives = 73/85 (85%)
Frame = +1
Query: 4 DFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQ 183
DF +++RA+FEE+N DLF+ T++PVE+ L+D+ + K++I DIVLVGGSTRIPKVQ+LL+
Sbjct: 322 DFSETLSRAKFEEINMDLFKKTLKPVEQVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLE 381
Query: 184 DFFNGKELNKSINPDEAVAYGAAVR 258
FF GK+ +K INPDEAVAYGAAV+
Sbjct: 382 SFF-GKKASKGINPDEAVAYGAAVQ 405
Score = 97.9 bits (233), Expect = 1e-21
Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Frame = +2
Query: 509 LTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS-TNKENKITITNDKGRLSKEEIERMV 685
L GIPPAPRGVPQIEVTF++DANG+L VSA++KS K K+ I NDKGRLS+E+IERMV
Sbjct: 488 LRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEEDIERMV 547
Query: 686 NEAEK 700
EAE+
Sbjct: 548 KEAEE 552
Score = 71.3 bits (167), Expect = 1e-13
Identities = 40/85 (47%), Positives = 47/85 (55%)
Frame = +3
Query: 255 QAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQ 434
QA +L G++ + + GIET GGVMT LI RN DNQ
Sbjct: 405 QAGVLSGEEGSD--NIVLLDVIPLTLGIETTGGVMTKLIGRNTPIPTRKSQIFSTAVDNQ 462
Query: 435 PGVLIQVFEGERAMTKDNNLLGKFD 509
VLIQV+EGER +TKDNNLLGKFD
Sbjct: 463 NTVLIQVYEGERTLTKDNNLLGKFD 487
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 83.0 bits (196), Expect = 4e-17
Identities = 39/65 (60%), Positives = 52/65 (80%)
Frame = +2
Query: 506 RLTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMV 685
+LTGI PAP+G PQIEV+FD+DA+GI+NVSA +K+TNK++ IT+ G L+ EIE MV
Sbjct: 501 QLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVAGSSG-LTDSEIEAMV 559
Query: 686 NEAEK 700
+AEK
Sbjct: 560 ADAEK 564
Score = 79.8 bits (188), Expect = 3e-16
Identities = 36/80 (45%), Positives = 61/80 (76%)
Frame = +1
Query: 19 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG 198
I+RA+FE+L L R T++P +++L+DA + ++I++++LVGG TR+P+V + ++ F
Sbjct: 343 ISRAQFEKLVDPLVRRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK- 401
Query: 199 KELNKSINPDEAVAYGAAVR 258
+E KS+NPDEAVA GAA++
Sbjct: 402 REPAKSVNPDEAVAIGAAIQ 421
Score = 57.6 bits (133), Expect = 2e-09
Identities = 34/87 (39%), Positives = 41/87 (47%)
Frame = +3
Query: 258 AAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQP 437
AAI G S V+D GIET GGV T LI RN +D Q
Sbjct: 418 AAIQGGVLSGHVKDLVLLDVTPLSLGIETLGGVFTRLINRNTTIPTRKSQVFSTAADGQT 477
Query: 438 GVLIQVFEGERAMTKDNNLLGKFD*PG 518
V I+VF+GER + +DN L+G F G
Sbjct: 478 AVEIRVFQGERELVRDNKLIGNFQLTG 504
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 72.1 bits (169), Expect = 7e-14
Identities = 33/84 (39%), Positives = 55/84 (65%)
Frame = +1
Query: 1 IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL 180
IDF ITR+ E L D+ + +EP+ K+L+ A + ++I+ I+L GG++RIP +Q L
Sbjct: 325 IDFRLKITRSVLESLCKDMEDAAVEPINKALKKANLTFSEINSIILFGGASRIPFIQSTL 384
Query: 181 QDFFNGKELNKSINPDEAVAYGAA 252
D+ + +++K++N DEA GAA
Sbjct: 385 ADYVSSDKISKNVNADEASVKGAA 408
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 68.1 bits (159), Expect = 1e-12
Identities = 39/94 (41%), Positives = 58/94 (61%)
Frame = +1
Query: 1 IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL 180
ID + I R+ FEEL L P+EK+L A + K ++ I +VGG TR+P V++++
Sbjct: 297 IDASSFIKRSDFEELIKPLLERLTPPIEKALELAGIKKEDLYSIEMVGGCTRVPIVKEVI 356
Query: 181 QDFFNGKELNKSINPDEAVAYGAAVRLLSCTVTS 282
++F GK L+ ++N DEAVA G A LSC + S
Sbjct: 357 ANYF-GKGLSFTLNQDEAVARGCA---LSCAILS 386
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 44.8 bits (101), Expect = 1e-05
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Frame = +1
Query: 1 IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL 180
IDF++SI R R++ + + V +++ A M+ I +++L GG++ PK+ L+
Sbjct: 315 IDFHSSINRLRYDLAASATLNRMADLVTEAVEKANMEPFDISEVILAGGASNTPKLTSLM 374
Query: 181 QDFFNGKELNKS--------INPDEAVAYGAAVR 258
+ F + + +S ++P E A G+ V+
Sbjct: 375 ESIFPEQTIIRSSSSVTPLQLDPSELTAIGSGVQ 408
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 29.9 bits (64), Expect = 0.37
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 569 DANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNE 691
D LNVS + S +E +T ++ R+ +EE +RM ++
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASK 98
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 577 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAY 681
R P R +YRE H + + H R QGR +Y
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSY 355
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 614 NKENKITITNDKGRLSKEEIERMVNEAE 697
NK+ K T D SKEE+E +V E E
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE 556
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -3
Query: 594 ETLRIPLASMSKVTSI*GTPRGAGGIP 514
E L PLA MS TSI G G GG P
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFP 102
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 647 KGRLSKEEIERMVNEAEK 700
KG LSKEE+ER V +A K
Sbjct: 525 KGTLSKEELERRVYDAAK 542
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 127 RGFEPYPSWHHGETSPLAP 71
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +1
Query: 160 PKVQKLLQDFFNGKELNKSINPDEAVAYGAAVRLLSC 270
P +K QDF G ++ K +N + YG + C
Sbjct: 563 PLQRKAYQDFLQGSDMQKILNGKRQMLYGIDILRKIC 599
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 379 TLPSPLNRLRHSPPTLITNPEYSSKYLR 462
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 257
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 539 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITN-DKGRLSKEEIERMVNEAEK 700
+P TF NG++N+S + ++ N E + DKGR + + ++ E K
Sbjct: 122 IPVKRGTFIEFRNGMINISPVGRNANTEERNEFERFDKGRKIRATMVDVLREKFK 176
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +2
Query: 53 ICSGLPWSQ----WRSLSVMPRWIRLKSTILYWW 142
ICS LP + W + S PR+ R S ++ WW
Sbjct: 133 ICSALPAAGSIYLWAAESAGPRFGRFVSFLVAWW 166
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,743,592
Number of Sequences: 5004
Number of extensions: 54383
Number of successful extensions: 237
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 325165428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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