Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20506
(701 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 2e-34
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 142 2e-34
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 134 9e-32
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 128 6e-30
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 2e-18
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 89 2e-18
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 89 3e-18
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_2761| Best HMM Match : zf-TRAF (HMM E-Value=0.26) 31 1.2
SB_23493| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_21961| Best HMM Match : FlaE (HMM E-Value=1.2) 29 4.8
SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 28 8.4
SB_8228| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 142 bits (344), Expect = 2e-34
Identities = 66/87 (75%), Positives = 81/87 (93%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD-KAQIHDIVLVGGSTRIPKVQKL 177
IDFYTSITRARFEE+NA LF+ T+EPVEK+++D+K++ K +I +IV+VGGSTRIPK+Q L
Sbjct: 384 IDFYTSITRARFEEMNAHLFKKTLEPVEKAIKDSKLESKEKIDEIVMVGGSTRIPKIQSL 443
Query: 178 LQDFFNGKELNKSINPDEAVAYGAAVR 258
LQ+FFNGKELNKSINPDEAVAYGAAV+
Sbjct: 444 LQNFFNGKELNKSINPDEAVAYGAAVQ 470
Score = 120 bits (290), Expect = 9e-28
Identities = 55/64 (85%), Positives = 62/64 (96%)
Frame = +2
Query: 509 LTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVN 688
L+GIPPAPRGVPQI+VTFD+D+NGILNVSA++KST KENKITITNDKGRLSKE+IERMV
Sbjct: 555 LSGIPPAPRGVPQIDVTFDVDSNGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVK 614
Query: 689 EAEK 700
EAEK
Sbjct: 615 EAEK 618
Score = 100 bits (239), Expect = 1e-21
Identities = 51/88 (57%), Positives = 56/88 (63%)
Frame = +3
Query: 255 QAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQ 434
QAAILHGDKSE QD G+ETAGGVMT IKRN YSDNQ
Sbjct: 470 QAAILHGDKSEATQDLLLLDVAPLTLGLETAGGVMTAAIKRNTTIPTKQTQTFTTYSDNQ 529
Query: 435 PGVLIQVFEGERAMTKDNNLLGKFD*PG 518
VLIQV+EGER++TKDNNLLGKF+ G
Sbjct: 530 TSVLIQVYEGERSLTKDNNLLGKFELSG 557
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 142 bits (344), Expect = 2e-34
Identities = 68/88 (77%), Positives = 78/88 (88%), Gaps = 2/88 (2%)
Frame = +1
Query: 1 IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQK 174
IDFYTSITRARFEELN DLF+ T EPVE+++RD+K+ K IHDIVLVGGSTRIPK+QK
Sbjct: 291 IDFYTSITRARFEELNQDLFKKTTEPVEQAIRDSKIPGGKESIHDIVLVGGSTRIPKIQK 350
Query: 175 LLQDFFNGKELNKSINPDEAVAYGAAVR 258
+LQ+ F GKELNKSINPDEAVAYGAAV+
Sbjct: 351 MLQELFGGKELNKSINPDEAVAYGAAVQ 378
Score = 125 bits (302), Expect = 3e-29
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = +2
Query: 509 LTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVN 688
LTGIPPAPRGVPQIEVTFDIDANGILNVSA++KST KENKITITNDKGRLSKE+IERMVN
Sbjct: 463 LTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVN 522
Query: 689 EAEK 700
EA K
Sbjct: 523 EASK 526
Score = 101 bits (242), Expect = 6e-22
Identities = 52/88 (59%), Positives = 57/88 (64%)
Frame = +3
Query: 255 QAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQ 434
QAAILHGDK + V+D GIETAGGVM+ LIKRN YSDNQ
Sbjct: 378 QAAILHGDKDDTVKDLLLLDVAPLSMGIETAGGVMSVLIKRNSTIPTKQTQTFTTYSDNQ 437
Query: 435 PGVLIQVFEGERAMTKDNNLLGKFD*PG 518
PGVLIQVFEGER+MT NNLLGKF+ G
Sbjct: 438 PGVLIQVFEGERSMTAHNNLLGKFELTG 465
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 134 bits (323), Expect = 9e-32
Identities = 59/86 (68%), Positives = 76/86 (88%)
Frame = +1
Query: 1 IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL 180
IDFYT I+RARFE+L +DLF S ++PV K+L DAK K+ IH++VLVGGSTR+PK+QK+L
Sbjct: 292 IDFYTKISRARFEDLCSDLFLSCLDPVNKALSDAKFSKSDIHEVVLVGGSTRVPKIQKML 351
Query: 181 QDFFNGKELNKSINPDEAVAYGAAVR 258
+++F+GK LNKSINPDEAVAYGAAV+
Sbjct: 352 EEYFSGKSLNKSINPDEAVAYGAAVQ 377
Score = 115 bits (276), Expect = 4e-26
Identities = 54/64 (84%), Positives = 59/64 (92%)
Frame = +2
Query: 509 LTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVN 688
L+GIPPAPRGVPQIEVTFDIDANGILNVSA +KST K ITITNDKGRLSKEEI+RM+N
Sbjct: 462 LSGIPPAPRGVPQIEVTFDIDANGILNVSAKDKSTGKTGSITITNDKGRLSKEEIDRMIN 521
Query: 689 EAEK 700
+AEK
Sbjct: 522 DAEK 525
Score = 94.3 bits (224), Expect = 9e-20
Identities = 50/88 (56%), Positives = 55/88 (62%)
Frame = +3
Query: 255 QAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQ 434
QAAIL GDKS+EV+D GIETAG VMT LI+RN YSDNQ
Sbjct: 377 QAAILSGDKSDEVKDVLLVDVAPLSLGIETAGEVMTKLIERNARIPTKATQTFTTYSDNQ 436
Query: 435 PGVLIQVFEGERAMTKDNNLLGKFD*PG 518
P V I+VFEGER +TK NNLLGKFD G
Sbjct: 437 PAVTIRVFEGERPLTKHNNLLGKFDLSG 464
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 128 bits (308), Expect = 6e-30
Identities = 59/85 (69%), Positives = 74/85 (87%)
Frame = +1
Query: 4 DFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQ 183
DF +TRARFEELNA LF+ST++PV+K L DA + K++IH+IVLVGGSTRIPKVQ+L++
Sbjct: 989 DFSEMLTRARFEELNAKLFKSTLKPVQKVLEDADLKKSEIHEIVLVGGSTRIPKVQQLVK 1048
Query: 184 DFFNGKELNKSINPDEAVAYGAAVR 258
DFF GKE ++ INPDEAVAYGAAV+
Sbjct: 1049 DFFEGKEPSRGINPDEAVAYGAAVQ 1073
Score = 101 bits (241), Expect = 7e-22
Identities = 47/64 (73%), Positives = 54/64 (84%)
Frame = +2
Query: 509 LTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVN 688
L GIPPAPRGVPQIEVTF+ID NGIL VSA +K T + KITITND+ RL+ E+IERMVN
Sbjct: 1156 LNGIPPAPRGVPQIEVTFEIDVNGILRVSAEDKGTGNKEKITITNDQNRLTPEDIERMVN 1215
Query: 689 EAEK 700
+AEK
Sbjct: 1216 DAEK 1219
Score = 69.3 bits (162), Expect = 3e-12
Identities = 40/85 (47%), Positives = 46/85 (54%)
Frame = +3
Query: 255 QAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQ 434
QA +L G+ E+ + GIET GGVMT LI RN +DNQ
Sbjct: 1073 QAGVLGGE--EDTGEVVLLDVNPLTLGIETVGGVMTKLISRNTVIPTKKSQVFSTAADNQ 1130
Query: 435 PGVLIQVFEGERAMTKDNNLLGKFD 509
V IQVFEGER MTKDN+ LGKFD
Sbjct: 1131 NTVTIQVFEGERPMTKDNHPLGKFD 1155
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 89.8 bits (213), Expect = 2e-18
Identities = 43/65 (66%), Positives = 51/65 (78%)
Frame = +2
Query: 506 RLTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMV 685
+L GIPPAPRGVPQ+EVTFDIDANGI+NVSA +K T +E +I I G LSK+ IE M+
Sbjct: 266 QLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDKGTGREQQIVI-QSSGGLSKDAIENMI 324
Query: 686 NEAEK 700
EAEK
Sbjct: 325 KEAEK 329
Score = 89.4 bits (212), Expect = 2e-18
Identities = 41/80 (51%), Positives = 63/80 (78%)
Frame = +1
Query: 19 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG 198
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G
Sbjct: 108 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-G 166
Query: 199 KELNKSINPDEAVAYGAAVR 258
+ +K++NPDEAVA GAA++
Sbjct: 167 RVPSKAVNPDEAVAIGAAIQ 186
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/83 (40%), Positives = 41/83 (49%)
Frame = +3
Query: 258 AAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQP 437
AAI G + +V+D GIET GGV T LI RN +D Q
Sbjct: 183 AAIQGGVLAGDVKDVLLLDVTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQT 242
Query: 438 GVLIQVFEGERAMTKDNNLLGKF 506
V I+VF+GER M DN LLG+F
Sbjct: 243 QVEIKVFQGEREMAIDNKLLGQF 265
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 89.4 bits (212), Expect = 2e-18
Identities = 41/80 (51%), Positives = 63/80 (78%)
Frame = +1
Query: 19 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG 198
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G
Sbjct: 53 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-G 111
Query: 199 KELNKSINPDEAVAYGAAVR 258
+ +K++NPDEAVA GAA++
Sbjct: 112 RVPSKAVNPDEAVAIGAAIQ 131
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/83 (40%), Positives = 41/83 (49%)
Frame = +3
Query: 258 AAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQP 437
AAI G + +V+D GIET GGV T LI RN +D Q
Sbjct: 128 AAIQGGVLAGDVKDVLLLDVTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQT 187
Query: 438 GVLIQVFEGERAMTKDNNLLGKF 506
V I+VF+GER M DN LLG+F
Sbjct: 188 QVEIKVFQGEREMAIDNKLLGQF 210
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 89.0 bits (211), Expect = 3e-18
Identities = 35/86 (40%), Positives = 64/86 (74%)
Frame = +1
Query: 1 IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL 180
+ F +I+R FE +N DLF+ ++P+ + L + ++ K ++ ++VLVGGSTR+PK+++L+
Sbjct: 324 VKFKETISRKMFETINEDLFKKVLQPIRRVLAEVELPKEEVDEVVLVGGSTRVPKIRQLI 383
Query: 181 QDFFNGKELNKSINPDEAVAYGAAVR 258
Q+FF+GK N +I+P+ AVA G +++
Sbjct: 384 QEFFDGKPPNVAIDPELAVATGVSIQ 409
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 71.7 bits (168), Expect = 5e-13
Identities = 38/86 (44%), Positives = 46/86 (53%)
Frame = +1
Query: 4 DFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQ 183
DF +TR EE+ DLF PV ++L+ A M I +VLVGG R+PKVQ L
Sbjct: 276 DFRVKVTREELEEMCQDLFDRVAGPVNRALKSASMTMNDIDSVVLVGGGIRVPKVQDALL 335
Query: 184 DFFNGKELNKSINPDEAVAYGAAVRL 261
EL K+IN DEA A G RL
Sbjct: 336 RAVKKPELAKNINADEAAALGMPARL 361
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 63.3 bits (147), Expect = 2e-10
Identities = 26/51 (50%), Positives = 42/51 (82%)
Frame = +1
Query: 106 MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVR 258
+ ++ + ++LVGG+TR PK+Q+LL+++F GKE+ + I+PDE VAYGAAV+
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQ 85
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/47 (46%), Positives = 35/47 (74%)
Frame = +1
Query: 118 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVR 258
+I + +VGGSTRIP ++ ++++ F GKEL ++N DEAVA G A++
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVF-GKELMTTMNADEAVARGCALQ 51
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 31.5 bits (68), Expect = 0.68
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 556 HLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQ 663
H +H+ ++ Q+ +Y++ HQ Q H Q+Q+ Q
Sbjct: 291 HQQHQLHQHQQQHQYQQQHQHQHQHQHQQQQQQQQQ 326
>SB_2761| Best HMM Match : zf-TRAF (HMM E-Value=0.26)
Length = 436
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1
Query: 484 ITTCSVNSTDRDPTGAAWRASN*GHLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQ 663
I C N+ R G WR N GH++ R Q P +Y+ + + + H QR L+
Sbjct: 230 IPECPGNNRGRGGRGR-WRRQNHGHIQSRTQVQPSSQQYKTLPSE-QSSPHKMSQREPLK 287
>SB_23493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1230
Score = 29.1 bits (62), Expect = 3.6
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 7/108 (6%)
Frame = +1
Query: 367 SSSVT-LPSPLNRLRHSPPTLITNPEYSSKYLRVSVL*P-----KITTCSVNSTDRDPTG 528
S VT + SPLN ++ T ++ ++S+ Y L P K T S + T
Sbjct: 172 SPKVTPMVSPLNGFFNATWTYRSDSDFSAAYATYVPLSPTEMSYKKVTISKRDYSKGKTS 231
Query: 529 -AAWRASN*GHLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQGR 669
AW SN R R + + +Y +VH G HY + R +G+
Sbjct: 232 LVAWVVSNCS-ARLRNEFVAELMKYIDVHVYGSCSSHYNQTRVCNRGK 278
>SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 568 RCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRD 672
R QRY + + RE HQ+G HH R S + RD
Sbjct: 134 RDQRY-RDYEDRERHQRGRDRHHRDRDDSGCRFRD 167
>SB_21961| Best HMM Match : FlaE (HMM E-Value=1.2)
Length = 816
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 376 VTLPSPLNRLRHSPPTLITNPEYSSKYLRVSVL*PKITTCSVNSTD 513
+T+ SP+ R R SP + +S Y R+SV T +N TD
Sbjct: 370 ITVDSPIMRRRSSPTGEASVEGENSSYYRISVTPSPATVELINETD 415
>SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 574 QRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRDR 675
QR QR R R+ H+Q ++ QRQR + R R
Sbjct: 36 QRQRQRQRQRQRHRQRQRQRQRQRQRQRQRQRQR 69
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 4 DFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIV 135
D + + RA+FEEL ADL + P+ +L A+ K + ++V
Sbjct: 353 DVHGRMKRAQFEELAADLLKLVEAPLRSAL--AQSGKYSVKNVV 394
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +2
Query: 596 AIEKSTNKENKITITNDKGRLSKEEIER--MVNEAEK 700
A +K+T+K + ITN G++ KEE +R V E++K
Sbjct: 1132 AEQKATSKLQEEEITNAMGKIEKEEAKRKAAVEESQK 1168
>SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0)
Length = 1066
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 382 LPSPLNRLRHSPPTLITNP 438
LP N + H+PPT + NP
Sbjct: 760 LPDTANEIEHAPPTTVINP 778
>SB_8228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/58 (22%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 13 TSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGG-STRIPKVQKLLQ 183
T ++ARF++ DL T++P+ ++++ D + +++ G R+ + L+Q
Sbjct: 176 TEHSKARFKQQLTDLVIHTLQPIRENIQSLSKDPGLVSNVLETGAEKARLLAEETLVQ 233
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,337,125
Number of Sequences: 59808
Number of extensions: 454307
Number of successful extensions: 4514
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4501
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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