Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20505
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    24   1.3  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    23   2.3  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   7.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   7.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   7.1  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +2

Query: 161 LNVLTLGKEENLTELTYALKSIKWDIIGLSEG 256
           + V+ +G +  +  + Y++  I W I+G   G
Sbjct: 231 IQVIVIGTKNTIETVAYSVIFILWHIVGTFSG 262


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 584 SKTPRRKRNTRTIF 625
           S  PR KRN RTIF
Sbjct: 89  SAFPRLKRNARTIF 102


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +2

Query: 191 NLTELTYALKSIKWDI-IGL 247
           NLT +TY+L  I W + IG+
Sbjct: 173 NLTLITYSLCVISWAVGIGI 192


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +2

Query: 191 NLTELTYALKSIKWDI-IGL 247
           NLT +TY+L  I W + IG+
Sbjct: 173 NLTLITYSLCVISWAVGIGI 192


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 83  LEGESDHNPPTSKDNNHRKPV 145
           + GE+   PPT  ++N   PV
Sbjct: 1   MSGEAHIGPPTPHESNTSTPV 21


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,165
Number of Sequences: 336
Number of extensions: 4020
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)