Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20505
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    25   2.9  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   3.9  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   6.7  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 195 LRN*HMR*NLSNGT*LV*AKEKNGRKYYLSSRLFT-VPNRGDARPIWGRIY 344
           +RN H+R  L+ G   +  KE     + LS+ LFT  P+R +  P   R++
Sbjct: 662 IRNPHLRARLAEGLESLLPKESEPAGFSLSATLFTNHPHRLEIIPNLLRVF 712


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 11/27 (40%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = +2

Query: 218 KSIKWDIIGLS--EGEEWAKVLLVIQT 292
           K  K ++I +S  EG++W  +LL++QT
Sbjct: 492 KPAKPELIEVSPNEGQDWESLLLLVQT 518


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 152 IASLNVLTLGKEENLTELTYALKSIKWDIIGLSE 253
           IAS+N+ T+     L  L   ++++  D+I L E
Sbjct: 18  IASININTISSATKLEALKTFIRTMDLDVIFLQE 51


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,638
Number of Sequences: 2352
Number of extensions: 16437
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)