Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20503
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    25   0.71 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    25   0.71 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   3.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   3.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   6.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.7  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
 Frame = +1

Query: 472 YHICDPIFKKVLDFMM--YTS*WR----LENFANYAHKKFWTSI 585
           YHIC+ +    + FMM      WR    L N+      + WTS+
Sbjct: 158 YHICNTVISATVCFMMLLMLEIWRRFTILNNYLTIVLGETWTSL 201


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
 Frame = +1

Query: 472 YHICDPIFKKVLDFMM--YTS*WR----LENFANYAHKKFWTSI 585
           YHIC+ +    + FMM      WR    L N+      + WTS+
Sbjct: 154 YHICNTVISATVCFMMLLMLEIWRRFTILNNYLTIVLGETWTSL 197


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 540 GKFCELRAQKILDKYSFRNKIQ 605
           G  CE R ++I +   FRN +Q
Sbjct: 375 GYVCEHRWRQIFNMVGFRNAVQ 396


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 540 GKFCELRAQKILDKYSFRNKIQ 605
           G  CE R ++I +   FRN +Q
Sbjct: 376 GYVCEHRWRQIFNMVGFRNAVQ 397


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +2

Query: 218 DWLGIKGSVGKPHWKLSLDQLMDL 289
           DW+  KG  G   W + +D    L
Sbjct: 356 DWIKSKGYGGAMTWAIDMDDFHGL 379


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 134 TILFSGLGCQSVPLQTL 84
           T+L SG  C+  PL+TL
Sbjct: 551 TVLESGAFCKMQPLRTL 567


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 158 YFNLLFCCTIL 126
           Y +LLFCC  +
Sbjct: 263 YMHLLFCCAFI 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,986
Number of Sequences: 336
Number of extensions: 4020
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)