Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20502
         (480 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR450354-1|CAG29350.1|  137|Homo sapiens NDUFB7 protein.               52   8e-07
BC002595-1|AAH02595.1|  137|Homo sapiens NADH dehydrogenase (ubi...    52   8e-07
AF217091-1|AAF91223.1|  137|Homo sapiens NADH:ubiquinoe oxidored...    52   8e-07
AF112200-1|AAF17188.1|  137|Homo sapiens NADH-oxidoreductase B18...    52   8e-07
M33374-1|AAA35675.1|  135|Homo sapiens protein ( Human cell adhe...    47   3e-05

>CR450354-1|CAG29350.1|  137|Homo sapiens NDUFB7 protein.
          Length = 137

 Score = 52.4 bits (120), Expect = 8e-07
 Identities = 23/54 (42%), Positives = 38/54 (70%)
 Frame = +2

Query: 98  SVDLNSDDNPTFDPQAGFQYERKQREMIAKEEDLISARIPNKYRDYCAHYLLAI 259
           SV+ +    PTF P  GF  ERK+REM+A +++++ A++  + RDYCAH+L+ +
Sbjct: 14  SVEPDPLQMPTFPPDYGFP-ERKEREMVATQQEMMDAQLRLQLRDYCAHHLIRL 66



 Score = 35.9 bits (79), Expect = 0.074
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 265 CRYKEMPLLYRCAHEKHNYLNCEQQDYVLRMK 360
           C+    P    C  E+H++  CE +DYV+RMK
Sbjct: 69  CKRDSFPNFLACKQERHDWDYCEHRDYVMRMK 100


>BC002595-1|AAH02595.1|  137|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex, 7, 18kDa protein.
          Length = 137

 Score = 52.4 bits (120), Expect = 8e-07
 Identities = 23/54 (42%), Positives = 38/54 (70%)
 Frame = +2

Query: 98  SVDLNSDDNPTFDPQAGFQYERKQREMIAKEEDLISARIPNKYRDYCAHYLLAI 259
           SV+ +    PTF P  GF  ERK+REM+A +++++ A++  + RDYCAH+L+ +
Sbjct: 14  SVEPDPLQMPTFPPDYGFP-ERKEREMVATQQEMMDAQLRLQLRDYCAHHLIRL 66



 Score = 35.9 bits (79), Expect = 0.074
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 265 CRYKEMPLLYRCAHEKHNYLNCEQQDYVLRMK 360
           C+    P    C  E+H++  CE +DYV+RMK
Sbjct: 69  CKRDSFPNFLACKQERHDWDYCEHRDYVMRMK 100


>AF217091-1|AAF91223.1|  137|Homo sapiens NADH:ubiquinoe
           oxidoreductase NDUFB7 subunit protein.
          Length = 137

 Score = 52.4 bits (120), Expect = 8e-07
 Identities = 23/54 (42%), Positives = 38/54 (70%)
 Frame = +2

Query: 98  SVDLNSDDNPTFDPQAGFQYERKQREMIAKEEDLISARIPNKYRDYCAHYLLAI 259
           SV+ +    PTF P  GF  ERK+REM+A +++++ A++  + RDYCAH+L+ +
Sbjct: 14  SVEPDPLQMPTFPPDYGFP-ERKEREMVATQQEMMDAQLRLQLRDYCAHHLIRL 66



 Score = 35.9 bits (79), Expect = 0.074
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 265 CRYKEMPLLYRCAHEKHNYLNCEQQDYVLRMK 360
           C+    P    C  E+H++  CE +DYV+RMK
Sbjct: 69  CKRDSFPNFLACKQERHDWDYCEHRDYVMRMK 100


>AF112200-1|AAF17188.1|  137|Homo sapiens NADH-oxidoreductase B18
           subunit protein.
          Length = 137

 Score = 52.4 bits (120), Expect = 8e-07
 Identities = 23/54 (42%), Positives = 38/54 (70%)
 Frame = +2

Query: 98  SVDLNSDDNPTFDPQAGFQYERKQREMIAKEEDLISARIPNKYRDYCAHYLLAI 259
           SV+ +    PTF P  GF  ERK+REM+A +++++ A++  + RDYCAH+L+ +
Sbjct: 14  SVEPDPLQMPTFPPDYGFP-ERKEREMVATQQEMMDAQLRLQLRDYCAHHLIRL 66



 Score = 35.9 bits (79), Expect = 0.074
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 265 CRYKEMPLLYRCAHEKHNYLNCEQQDYVLRMK 360
           C+    P    C  E+H++  CE +DYV+RMK
Sbjct: 69  CKRDSFPNFLACKQERHDWDYCEHRDYVMRMK 100


>M33374-1|AAA35675.1|  135|Homo sapiens protein ( Human cell
           adhesion protein (SQM1) mRNA, complete cds. ).
          Length = 135

 Score = 47.2 bits (107), Expect = 3e-05
 Identities = 23/54 (42%), Positives = 36/54 (66%)
 Frame = +2

Query: 98  SVDLNSDDNPTFDPQAGFQYERKQREMIAKEEDLISARIPNKYRDYCAHYLLAI 259
           SV+ +    PTF P  GF  ERK+REM+A +++++ A    + RDYCAH+L+ +
Sbjct: 14  SVEPDPLQMPTFPPDYGFP-ERKEREMVATQQEMMDAS-EAQLRDYCAHHLIRL 65


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,817,980
Number of Sequences: 237096
Number of extensions: 949432
Number of successful extensions: 1739
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1735
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)