Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20501
         (658 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        25   2.1  
AY748840-1|AAV28188.1|  104|Anopheles gambiae cytochrome P450 pr...    24   3.7  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    24   3.7  
AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse t...    23   6.4  

>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 117 LYGVPQNPVRYPPRPGIRKSIPQ 49
           L G+P  P +    P +RKS PQ
Sbjct: 56  LLGLPDRPNKQHVHPSLRKSAPQ 78


>AY748840-1|AAV28188.1|  104|Anopheles gambiae cytochrome P450
           protein.
          Length = 104

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = -1

Query: 415 RVNVLV---LDSVKVKETELADYLVGKGSLVFTG 323
           R++ LV   +  V   +TELA + + KG+L+  G
Sbjct: 18  RIDTLVPSGIPHVATADTELAGFQIPKGTLIING 51


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 359 LFSWQRLTRFYRVMLHCRDPFIFDITK 279
           LFSW+ + +  + + H  + F  D+TK
Sbjct: 293 LFSWRIMVKKMKAIYHTLNLFNMDVTK 319


>AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 129

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +1

Query: 139 IGNVERVGLSTHLIKFYR 192
           +  + R+GLST L+K++R
Sbjct: 83  LAKLARIGLSTPLVKWFR 100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,680
Number of Sequences: 2352
Number of extensions: 10475
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)