Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20477
(404 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 30 0.037
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 28 0.11
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 28 0.15
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 25 1.0
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 24 2.4
AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeot... 24 2.4
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 23 3.2
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 22 7.4
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 29.9 bits (64), Expect = 0.037
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +1
Query: 193 GGGAGFRSNRSGGVQRGRNRG 255
GGG G R R GG RGR RG
Sbjct: 66 GGGRGGRGGRGGGRGRGRGRG 86
Score = 24.6 bits (51), Expect = 1.4
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 148 GGAGRKFDANKRTGRGGGAGFRSNRSGG 231
GG GR + GRG G G R R GG
Sbjct: 65 GGGGRGGRGGRGGGRGRGRG-RGGRDGG 91
Score = 22.2 bits (45), Expect = 7.4
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSG 228
GGG G + GRG G G R G
Sbjct: 66 GGGRGGRGGRGGGRGRGRGRGGRDGGGG 93
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 28.3 bits (60), Expect = 0.11
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +1
Query: 121 KANKKTRI--GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA 258
K KK R GGG RK R G GG + G ++ + +GA
Sbjct: 940 KGEKKPRKSQGGGGSRKRKEKARRGSGGDSDSEEEEGEGSRKRKKKGA 987
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 27.9 bits (59), Expect = 0.15
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 350 DTLMRHICPPFVILESSNYWNYPRIVGRFRYAPRFLPRC 234
D + + CPP I +NY+ P G++ Y + +C
Sbjct: 227 DGVCKQECPPMQIYNPTNYFWEPNPDGKYAYGATCVRKC 265
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 25.0 bits (52), Expect = 1.0
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA 258
GG G +++ R G G G G GG + G GA
Sbjct: 540 GGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGGVGA 577
Score = 25.0 bits (52), Expect = 1.0
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 142 IGGGAGRKFDANKRTGRGGGAGFRSNRSGG 231
+GGG+G A G GGG S GG
Sbjct: 676 VGGGSGAGGGAGSSGGSGGGLASGSPYGGG 705
Score = 23.8 bits (49), Expect = 2.4
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 142 IGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 255
+GGGA +G GGGAG GG+ G G
Sbjct: 671 LGGGA-----VGGGSGAGGGAGSSGGSGGGLASGSPYG 703
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.8 bits (49), Expect = 2.4
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQ 237
GGG GR D R G G GG+Q
Sbjct: 228 GGGGGRDRDHRDRDREREGGGNGGGGGGGMQ 258
>AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeotic
protein protein.
Length = 308
Score = 23.8 bits (49), Expect = 2.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 175 NKRTGRGGGAGFRSNRSGGVQRGRNRG 255
+++T GGG G + SGG G + G
Sbjct: 243 SQQTSNGGGTGGGTGGSGGAGSGGSSG 269
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 23.4 bits (48), Expect = 3.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGV 234
GG G + G GGG+G RS+ GG+
Sbjct: 663 GGSVGSGGIGSSSLGGGGGSG-RSSSGGGM 691
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 22.2 bits (45), Expect = 7.4
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +2
Query: 38 LNFHRKNI*NFK*SPWLIKLKWHWMIL*KPTKRQGLEVVLE 160
LN+H +N + S W+ + +W+ R G ++ +E
Sbjct: 331 LNYHHRNADTHEMSDWVRVIFLYWLPCILRMSRPGRDLSME 371
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,327
Number of Sequences: 2352
Number of extensions: 8372
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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