Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20477
(404 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 35 0.026
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 34 0.034
AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophi... 33 0.059
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 33 0.078
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.14
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 32 0.14
AL021173-1|CAE17951.1| 89|Caenorhabditis elegans Hypothetical ... 32 0.18
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 32 0.18
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 32 0.18
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 32 0.18
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 0.24
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 0.24
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 0.24
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 31 0.24
Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical pr... 31 0.31
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 31 0.42
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 30 0.55
Z75552-4|CAA99942.1| 624|Caenorhabditis elegans Hypothetical pr... 30 0.55
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 30 0.73
AL110485-18|CAB60366.1| 108|Caenorhabditis elegans Hypothetical... 30 0.73
Z82266-4|CAB05180.1| 227|Caenorhabditis elegans Hypothetical pr... 29 0.96
Z70783-9|CAA94857.2| 455|Caenorhabditis elegans Hypothetical pr... 29 0.96
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 29 0.96
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 29 0.96
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 29 0.96
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 29 1.3
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 29 1.3
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 1.3
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 1.3
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 29 1.3
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p... 29 1.7
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p... 29 1.7
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 29 1.7
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 1.7
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 29 1.7
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 28 2.2
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 28 2.2
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 28 2.2
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 2.2
AF098992-4|AAK73869.2| 250|Caenorhabditis elegans Hypothetical ... 28 2.2
AL161712-14|CAC35895.1| 286|Caenorhabditis elegans Hypothetical... 28 2.9
AF104858-1|AAC79090.1| 390|Caenorhabditis elegans putative RNA-... 28 2.9
AF063007-5|AAD47125.1| 712|Caenorhabditis elegans Prion-like-(q... 28 2.9
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z50016-14|CAI06050.2| 177|Caenorhabditis elegans Hypothetical p... 27 3.9
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 27 3.9
U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. 27 3.9
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 27 3.9
U41991-12|AAA83352.1| 251|Caenorhabditis elegans Hypothetical p... 27 5.1
AL117203-10|CAB60424.2| 855|Caenorhabditis elegans Hypothetical... 27 5.1
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 27 5.1
Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical pr... 27 6.8
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 27 6.8
AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical ... 27 6.8
Z34533-2|CAA84296.1| 166|Caenorhabditis elegans Hypothetical pr... 26 9.0
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 26 9.0
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 26 9.0
AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical ... 26 9.0
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 26 9.0
AF067211-9|AAC16994.1| 120|Caenorhabditis elegans Hypothetical ... 26 9.0
AC006676-3|AAK71381.3| 157|Caenorhabditis elegans Hypothetical ... 26 9.0
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 34.7 bits (76), Expect = 0.026
Identities = 22/41 (53%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 145 GGGAGR-KFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA*R 264
GGG GR FD GRGGG GFR GG RG +RG R
Sbjct: 326 GGGGGRGGFDG----GRGGGGGFRGGDRGGF-RGGDRGGFR 361
Score = 26.2 bits (55), Expect = 9.0
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +1
Query: 142 IGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQ-RGRNRGA*R 264
+GG G D G GG GF R GG RG +RG R
Sbjct: 312 MGGRGGFGGDRGGYGGGGGRGGFDGGRGGGGGFRGGDRGGFR 353
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 34.3 bits (75), Expect = 0.034
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA*R 264
GGG R D GRGGG GFR R GG + G RG R
Sbjct: 535 GGGGFRGGDRGGFRGRGGGGGFRGGR-GGDRGGGFRGGRR 573
>AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophila
vasa intronic gene)ortholog protein 1, isoform a
protein.
Length = 378
Score = 33.5 bits (73), Expect = 0.059
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = +1
Query: 148 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA*RNLPTIRG 285
GGAGR D + + G NR GG +RG RGA R P RG
Sbjct: 80 GGAGRPRDGERVSNENGDRPQGENRRGGPRRGGERGAAR--PAGRG 123
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 33.1 bits (72), Expect = 0.078
Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 124 ANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSG-GVQRGRNRGA 258
A K R GGG G + R GRGG G R R G G +RG R A
Sbjct: 322 ARKNQRQGGGRGGRGGRGGRGGRGGRGG-RGGRGGRGDRRGDKRSA 366
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 32.3 bits (70), Expect = 0.14
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 139 RIGGGAGRKFDANKRTG-RGGGAGFRSNRSGGVQRGRNR 252
R GGG GR+ ++R G R GG G RSGG G +R
Sbjct: 227 RYGGGGGRRGSPDRRGGFRSGGGGGGYMRSGGGGGGPDR 265
Score = 31.1 bits (67), Expect = 0.31
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNR----GA*RNLPTIRG*FQ 294
G G ++ ++R G GGG G R GG + G +R G R P RG F+
Sbjct: 192 GSRGGDRYGGDRRGGGGGGGGDRYGGGGGDRYGGDRYGGGGGRRGSPDRRGGFR 245
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 139 RIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 255
R GGG G ++ + R G GGG +R GG + G G
Sbjct: 214 RYGGGGGDRYGGD-RYGGGGGRRGSPDRRGGFRSGGGGG 251
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 32.3 bits (70), Expect = 0.14
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 127 NKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA*RNLPTIRG 285
N K+ GGG G D ++ RGGG G +RS +R R G R+ P RG
Sbjct: 42 NLKSSTGGGGGED-DNDRGERRGGGGGGDRDRSRSRERRRGGGG-RDEPRRRG 92
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNR 252
GGG R ++ RGGG R GG R+R
Sbjct: 65 GGGGDRDRSRSRERRRGGGGRDEPRRRGGDDEARSR 100
>AL021173-1|CAE17951.1| 89|Caenorhabditis elegans Hypothetical
protein VK10D6R.1 protein.
Length = 89
Score = 31.9 bits (69), Expect = 0.18
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA 258
GGG G + N G GG G+R N GG+ RG GA
Sbjct: 43 GGGYGYRPYGNGGYGSYGGYGYRPNPVGGMLRGALMGA 80
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 31.9 bits (69), Expect = 0.18
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 124 ANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNR 252
A ++ GG G + + GGG GF R GG G NR
Sbjct: 593 APRRPFTNGGFGAHSSLSSTSNSGGGGGFSGPRRGGFNSGMNR 635
Score = 29.9 bits (64), Expect = 0.73
Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
Frame = +1
Query: 139 RIGGG---AGRKFDANK-RTGRGGGAGFRSN----RSGGVQRGRNRG 255
RIGGG R+F A R GRGGG F N SGG G G
Sbjct: 536 RIGGGQRGGNRRFGATDYRVGRGGGGSFGGNFSNYNSGGATGGFGSG 582
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 31.9 bits (69), Expect = 0.18
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 124 ANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNR 252
A ++ GG G + + GGG GF R GG G NR
Sbjct: 577 APRRPFTNGGFGAHSSLSSTSNSGGGGGFSGPRRGGFNSGMNR 619
Score = 29.9 bits (64), Expect = 0.73
Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
Frame = +1
Query: 139 RIGGG---AGRKFDANK-RTGRGGGAGFRSN----RSGGVQRGRNRG 255
RIGGG R+F A R GRGGG F N SGG G G
Sbjct: 520 RIGGGQRGGNRRFGATDYRVGRGGGGSFGGNFSNYNSGGATGGFGSG 566
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 31.9 bits (69), Expect = 0.18
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 124 ANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNR 252
A ++ GG G + + GGG GF R GG G NR
Sbjct: 574 APRRPFTNGGFGAHSSLSSTSNSGGGGGFSGPRRGGFNSGMNR 616
Score = 29.9 bits (64), Expect = 0.73
Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
Frame = +1
Query: 139 RIGGG---AGRKFDANK-RTGRGGGAGFRSN----RSGGVQRGRNRG 255
RIGGG R+F A R GRGGG F N SGG G G
Sbjct: 517 RIGGGQRGGNRRFGATDYRVGRGGGGSFGGNFSNYNSGGATGGFGSG 563
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.5 bits (68), Expect = 0.24
Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGG-VQRGRNRG 255
GGG GR R G GGG G R GG GR RG
Sbjct: 99 GGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRGRG 136
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 148 GGAGRKFDANKRTGRGGGAGFRSNRSGG 231
GG GR GRGGG G R GG
Sbjct: 90 GGGGRGGGGGGGGGRGGGGGGRGGGGGG 117
Score = 27.1 bits (57), Expect = 5.1
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 139 RIGGGAGRKFDANKRTGRGGGAGFRSNRSGG 231
R GGG G GRGGG G R GG
Sbjct: 94 RGGGGGGGGGRGGGGGGRGGGGGGGGGRGGG 124
Score = 26.6 bits (56), Expect = 6.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 255
GGG G G GGG R GG G RG
Sbjct: 69 GGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRG 105
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 31.5 bits (68), Expect = 0.24
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1
Query: 151 GAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 255
GAG + GRGGGA + R GG Q GR G
Sbjct: 522 GAGGEAPGGGAGGRGGGAHGGAGRGGGYQGGRGGG 556
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGG 231
GG GR A+ GRGGG ++ R GG
Sbjct: 530 GGAGGRGGGAHGGAGRGGG--YQGGRGGG 556
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 148 GGAGRKFDANKRTGRGGGAGFRSNR 222
GGAGR + GRGGG GF++ R
Sbjct: 541 GGAGR--GGGYQGGRGGGRGFQNPR 563
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 31.5 bits (68), Expect = 0.24
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1
Query: 151 GAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 255
GAG + GRGGGA + R GG Q GR G
Sbjct: 522 GAGGEAPGGGAGGRGGGAHGGAGRGGGYQGGRGGG 556
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGG 231
GG GR A+ GRGGG ++ R GG
Sbjct: 530 GGAGGRGGGAHGGAGRGGG--YQGGRGGG 556
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 148 GGAGRKFDANKRTGRGGGAGFRSNR 222
GGAGR + GRGGG GF++ R
Sbjct: 541 GGAGR--GGGYQGGRGGGRGFQNPR 563
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 31.5 bits (68), Expect = 0.24
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 181 RTGRGGGAGFRSNRSGGVQRGRNRG 255
R GRGGG+GF GG RG +RG
Sbjct: 15 RGGRGGGSGFTPRGGGGGFRGGDRG 39
Score = 29.1 bits (62), Expect = 1.3
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRS---NRSGGVQRGRNRG 255
GG G + + T RGGG GFR RS G RG +RG
Sbjct: 12 GGFRGGRGGGSGFTPRGGGGGFRGGDRGRSPGGFRGGDRG 51
Score = 26.2 bits (55), Expect = 9.0
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +1
Query: 139 RIGGGAGRKFDANKRTG--RGGGAGFRSNRSGGVQRGRNRGA*R 264
R GGG R D + G RGG G S+ G RGR+ G R
Sbjct: 27 RGGGGGFRGGDRGRSPGGFRGGDRGRSSSGFRGGDRGRSPGGFR 70
>Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical
protein F33A8.3 protein.
Length = 208
Score = 31.1 bits (67), Expect = 0.31
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 255
G G GR + T R G R R GG + GR RG
Sbjct: 156 GRGGGRTNSGGEETARDTDGGERGGRGGGRRGGRGRG 192
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 30.7 bits (66), Expect = 0.42
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 181 RTGRGGGAGFRSNRSGG 231
R GRGGG GFR R GG
Sbjct: 4 RGGRGGGGGFRGGRGGG 20
Score = 30.7 bits (66), Expect = 0.42
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 148 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGR 246
GG G GRGGG GFR GG GR
Sbjct: 165 GGRGSDRGGRGGFGRGGGGGFRGGDRGGFGGGR 197
Score = 29.5 bits (63), Expect = 0.96
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGG-AGFRSNRSGGVQRGR 246
G G G F R G GGG GFR GG + GR
Sbjct: 178 GRGGGGGFRGGDRGGFGGGRGGFRGGDRGGFRGGR 212
Score = 27.9 bits (59), Expect = 2.9
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +1
Query: 139 RIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 255
R G G G F + G GGG GFR R GG + G RG
Sbjct: 4 RGGRGGGGGFRGGR--GGGGGGGFRGGR-GGDRGGGFRG 39
Score = 27.1 bits (57), Expect = 5.1
Identities = 18/36 (50%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGG--GAGFRSNRSGGVQRGR 246
GGG G F R GRGG G GFR R G GR
Sbjct: 18 GGGGGGGF----RGGRGGDRGGGFRGGRGGFGGGGR 49
Score = 27.1 bits (57), Expect = 5.1
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 148 GGAGRKFDANKR-TGRGGGAGFRSNRSGGVQRGRNRG 255
GG GR D R + RGG GF GG RG +RG
Sbjct: 156 GGRGRGGDRGGRGSDRGGRGGFGRGGGGGF-RGGDRG 191
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 30.3 bits (65), Expect = 0.55
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 127 NKKTRIGGGAGRKFDANKRTGRGGGA-GFRSNRSGG-VQRGRNRG 255
++ R GG GR + R GRG GA GFR GG G RG
Sbjct: 92 DRSDRGGGRGGRGGNFGDRGGRGRGAGGFRRGGEGGRFNEGERRG 136
>Z75552-4|CAA99942.1| 624|Caenorhabditis elegans Hypothetical
protein W04D2.4 protein.
Length = 624
Score = 30.3 bits (65), Expect = 0.55
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA*RNLP 273
GG R +KR GRG G NRSG V +N R P
Sbjct: 122 GGAHFRHKSGSKRRGRGKGIFLACNRSGNVSSDKNTANDRTGP 164
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 29.9 bits (64), Expect = 0.73
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +1
Query: 139 RIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 255
R GGG G G GGG G+ GG RG RG
Sbjct: 29 RGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGGRG 67
>AL110485-18|CAB60366.1| 108|Caenorhabditis elegans Hypothetical
protein Y46G5A.23 protein.
Length = 108
Score = 29.9 bits (64), Expect = 0.73
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA*R 264
GGG GR+ R G GGG +R GG RG GA R
Sbjct: 68 GGGGGRRHHRGHRHG-GGGHRHGGHRGGGGGRGMVIGAER 106
>Z82266-4|CAB05180.1| 227|Caenorhabditis elegans Hypothetical
protein F23B2.6 protein.
Length = 227
Score = 29.5 bits (63), Expect = 0.96
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +1
Query: 94 IEMALDDIIKANKKTR--IGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNR 252
I+M+L DII N+K + + + ++ G G +SGG RG R
Sbjct: 7 IDMSLSDIISTNRKNKKVVKKPIKKSAGGIRKRGNASNVGTPRRQSGGTSRGGGR 61
>Z70783-9|CAA94857.2| 455|Caenorhabditis elegans Hypothetical
protein ZK856.9 protein.
Length = 455
Score = 29.5 bits (63), Expect = 0.96
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGG--AGFRSNRSGGVQRGRNRGA*RN 267
GGG KR G+ GG GF+ R G G RG +N
Sbjct: 387 GGGGSNHNIFRKRPGQDGGQDGGFKRGRGGNFHGGSRRGGYQN 429
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 29.5 bits (63), Expect = 0.96
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 127 NKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA*RN 267
N ++ GGG F G G G+G SN G G++RG N
Sbjct: 211 NHESGFGGGKSGGFGGGNSGGSGFGSGGNSNGFGSGGGGQDRGERNN 257
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRN 249
G G+G +G+ GG GF S ++GG G N
Sbjct: 157 GFGSGNAGGTGFGSGKAGGTGFGSGKAGGTGFGGN 191
Score = 26.6 bits (56), Expect = 6.8
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNR 252
G G+G +G GG GF S ++GG G +
Sbjct: 147 GFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGFGSGK 182
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 29.5 bits (63), Expect = 0.96
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 127 NKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA*RN 267
N ++ GGG F G G G+G SN G G++RG N
Sbjct: 211 NHESGFGGGKSGGFGGGNSGGSGFGSGGNSNGFGSGGGGQDRGERNN 257
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRN 249
G G+G +G+ GG GF S ++GG G N
Sbjct: 157 GFGSGNAGGTGFGSGKAGGTGFGSGKAGGTGFGGN 191
Score = 26.6 bits (56), Expect = 6.8
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNR 252
G G+G +G GG GF S ++GG G +
Sbjct: 147 GFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGFGSGK 182
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 29.5 bits (63), Expect = 0.96
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 127 NKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA*RN 267
N ++ GGG F G G G+G SN G G++RG N
Sbjct: 211 NHESGFGGGKSGGFGGGNSGGSGFGSGGNSNGFGSGGGGQDRGERNN 257
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRN 249
G G+G +G+ GG GF S ++GG G N
Sbjct: 157 GFGSGNAGGTGFGSGKAGGTGFGSGKAGGTGFGGN 191
Score = 26.6 bits (56), Expect = 6.8
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNR 252
G G+G +G GG GF S ++GG G +
Sbjct: 147 GFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGFGSGK 182
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 29.1 bits (62), Expect = 1.3
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +1
Query: 145 GGGAGRK-FDANKRTGRGGGAGFRSNRS--GGVQRGRNRG 255
GGG GR + R GRGG G R R GG RG G
Sbjct: 672 GGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGRGG 711
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 29.1 bits (62), Expect = 1.3
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +1
Query: 145 GGGAGRK-FDANKRTGRGGGAGFRSNRS--GGVQRGRNRG 255
GGG GR + R GRGG G R R GG RG G
Sbjct: 713 GGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGRGG 752
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGV 234
GGG G G GGG GF N GG+
Sbjct: 75 GGGGGNYGGGGGNQGGGGGGGFNFNDIGGL 104
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGV 234
GGG G G GGG GF N GG+
Sbjct: 100 GGGGGNYGGGGGNQGGGGGGGFNFNDIGGL 129
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 1.3
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +1
Query: 145 GGGAGRK-FDANKRTGRGGGAGFRSNRS--GGVQRGRNRG 255
GGG GR + R GRGG G R R GG RG G
Sbjct: 672 GGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGRGG 711
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA*RN 267
G GR + +GRGGG G S GG G RG +N
Sbjct: 828 GSYRGRSSGGSGGSGRGGGRGGYSRGHGGGSGGGQRGNYQN 868
>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 28.7 bits (61), Expect = 1.7
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRG-GGAGFRSNRSG-GVQRGRNRG 255
G G G++ D NK G G GGAG + +SG G G+N G
Sbjct: 659 GSGNGKEGDGNKSGGSGKGGAG--NGKSGDGSGDGKNNG 695
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 148 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNR 252
GG+G+ N ++G G G G ++N +GG G+++
Sbjct: 672 GGSGKGGAGNGKSGDGSGDG-KNNGNGGTGDGKDK 705
>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 28.7 bits (61), Expect = 1.7
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRG-GGAGFRSNRSG-GVQRGRNRG 255
G G G++ D NK G G GGAG + +SG G G+N G
Sbjct: 659 GSGNGKEGDGNKSGGSGKGGAG--NGKSGDGSGDGKNNG 695
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 148 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNR 252
GG+G+ N ++G G G G ++N +GG G+++
Sbjct: 672 GGSGKGGAGNGKSGDGSGDG-KNNGNGGTGDGKDK 705
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSN--RSGGVQRGRNRG 255
GGG + R G GGG GFR GG+ R RG
Sbjct: 543 GGGFRGGMRGSPRGGMGGGGGFRGGPPGRGGMANRRGRG 581
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGG 231
GGG GR D G GGG G+ GG
Sbjct: 235 GGGGGRDRDRGGWGGGGGGRGYGGGGGGG 263
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +1
Query: 139 RIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 255
R GG+G N G GG G RS GG Q G G
Sbjct: 588 RYQGGSGNGGGGNGGGGGFGGGGQRSGGGGGFQSGGGGG 626
Score = 26.6 bits (56), Expect = 6.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA 258
G G G F + GGG GF+S GG Q+ + + A
Sbjct: 599 GNGGGGGFGGGGQRS-GGGGGFQSGGGGGRQQQQQQRA 635
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 255
G GR + +GRGGG G S GG G RG
Sbjct: 825 GSYRGRSSGGSGGSGRGGGRGGYSRGHGGGSGGGQRG 861
>Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical
protein ZK792.5 protein.
Length = 630
Score = 28.3 bits (60), Expect = 2.2
Identities = 18/33 (54%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Frame = +1
Query: 139 RIGGGAGRKFDA----NKRTGRGGGA-GFRSNR 222
R GGG GR D N R GRGGG GF NR
Sbjct: 56 RGGGGRGRGGDGGFRRNDRGGRGGGGRGFGGNR 88
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 187 GRGGGAGFRSNRSGGVQRGRNRG 255
GRGG GFR N GG + G RG
Sbjct: 62 GRGGDGGFRRNDRGG-RGGGGRG 83
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.3 bits (60), Expect = 2.2
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 148 GGAGRKFDANKRTGRGG--GAGFRSNRSGGVQRGRNRG 255
GG G D + G GG G G N+ GG RG N+G
Sbjct: 168 GGWGGSQDGGSQGGWGGQNGGGQGGNQGGGGGRGGNQG 205
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 28.3 bits (60), Expect = 2.2
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +1
Query: 145 GGGAGRKFDANKR-TGRGGGAGFRSNRSGGVQRGRNRGA*R 264
GGG G R R GG G+ +R G RG +RG R
Sbjct: 262 GGGGGFGGGGRDRFNDRSGGGGYGGDRDRGGDRGGDRGGSR 302
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +1
Query: 88 DQIEMALDDII--KANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGV 234
D I D+++ K K+ GG G G GGG GF N GG+
Sbjct: 100 DLIGGIFDNVVNRKGKKEQDNYGGGGNYGGGGGNQGGGGGGGFNFNDIGGL 150
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.3 bits (60), Expect = 2.2
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 145 GGGAGRKFD-ANKRTGRGGGA-GFRSNRSGGVQRGRNRG 255
GGG GR R G GGG G+ +N GG RG RG
Sbjct: 26 GGGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRG 64
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 148 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 255
GG GR D G GG + N GG G RG
Sbjct: 137 GGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRG 172
>AF098992-4|AAK73869.2| 250|Caenorhabditis elegans Hypothetical
protein F53C3.6a protein.
Length = 250
Score = 28.3 bits (60), Expect = 2.2
Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +1
Query: 157 GRKFDANKRTGRGGGAGFR--SNRSGGVQRGRNRG 255
GR DA GRGGG G R S GGV GR G
Sbjct: 16 GRNLDARGGRGRGGGGGGRGSSGARGGV-GGRGGG 49
Score = 26.2 bits (55), Expect = 9.0
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 139 RIGGGAGRKFDANKRTGRGG-GAGFRSNRSGGVQRGRNRGA 258
R GGG GR + R G GG G G R GG + G R +
Sbjct: 27 RGGGGGGRG-SSGARGGVGGRGGGGRGGGGGGFRSGGARSS 66
>AL161712-14|CAC35895.1| 286|Caenorhabditis elegans Hypothetical
protein Y66D12A.18 protein.
Length = 286
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +1
Query: 157 GRKFDANKRTGRGGGAGFRSNRSGGVQRG--RNR 252
G +F R GRGGG G R + + G RNR
Sbjct: 251 GGRFGGGSRRGRGGGGGGRRGENDSARGGNWRNR 284
>AF104858-1|AAC79090.1| 390|Caenorhabditis elegans putative
RNA-binding protein PRP-1 protein.
Length = 390
Score = 27.9 bits (59), Expect = 2.9
Identities = 22/48 (45%), Positives = 24/48 (50%)
Frame = +1
Query: 121 KANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA*R 264
K KK G R F A GRGGG GF +R G RGR+ GA R
Sbjct: 85 KEKKKPEEGSYNNRGFVAR---GRGGGTGF-VDRGG---RGRSNGAPR 125
>AF063007-5|AAD47125.1| 712|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 59
protein.
Length = 712
Score = 27.9 bits (59), Expect = 2.9
Identities = 22/48 (45%), Positives = 24/48 (50%)
Frame = +1
Query: 121 KANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA*R 264
K KK G R F A GRGGG GF +R G RGR+ GA R
Sbjct: 85 KEKKKPEEGSYNNRGFVAR---GRGGGTGF-VDRGG---RGRSNGAPR 125
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 27.5 bits (58), Expect = 3.9
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGG--AGFRSNRSGGVQRGRNRG 255
GGG + R GGG GFR R GG RG RG
Sbjct: 31 GGGGRGGYGGGDRGSFGGGDRGGFRGGRGGG-DRGGFRG 68
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +1
Query: 181 RTGRGGG--AGFRSNRSGGVQRG 243
R GRGGG GFR R GG + G
Sbjct: 55 RGGRGGGDRGGFRGGRGGGDRGG 77
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA 258
GGG+G + GGG G +GG G GA
Sbjct: 805 GGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGA 842
Score = 27.5 bits (58), Expect = 3.9
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 124 ANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA 258
+N + GGG G + G GGGAG + +GG G GA
Sbjct: 816 SNSNSGGGGGNGGGGNGGGGNGNGGGAG---DGNGGAGAGNGNGA 857
Score = 27.5 bits (58), Expect = 3.9
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA 258
GGGAG D N G G G G + G G GA
Sbjct: 839 GGGAG---DGNGGAGAGNGNGAGAGNGNGAGAGNGNGA 873
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 27.5 bits (58), Expect = 3.9
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 124 ANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA 258
+N + GGG G + G GGGAG + +GG G GA
Sbjct: 793 SNSNSGGGGGNGGGGNGGGGNGNGGGAG---DGNGGAGAGNGNGA 834
Score = 27.5 bits (58), Expect = 3.9
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA 258
GGGAG D N G G G G + G G GA
Sbjct: 816 GGGAG---DGNGGAGAGNGNGAGAGNGNGAGAGNGNGA 850
Score = 27.1 bits (57), Expect = 5.1
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 255
GGG G +N +G GGG G N GG G G
Sbjct: 787 GGGGG---GSNSNSGGGGGNGGGGNGGGGNGNGGGAG 820
>Z50016-14|CAI06050.2| 177|Caenorhabditis elegans Hypothetical
protein T21C12.8 protein.
Length = 177
Score = 27.5 bits (58), Expect = 3.9
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Frame = -2
Query: 271 VDFVMPHDFYLVVHHQSG----CYEIQHRLHVLFFC 176
V+F H + +V SG C IQH +H LFFC
Sbjct: 89 VNFAHLHFSHRLVDFASGDDVLCDRIQHTIHGLFFC 124
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNR 252
GGG R ++ RGGG R GG R+R
Sbjct: 87 GGGGDRDRSRSRERRRGGGGRDEPRRRGGDDEARSR 122
>U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein.
Length = 790
Score = 27.5 bits (58), Expect = 3.9
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 124 ANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA 258
+N + GGG G + G GGGAG + +GG G GA
Sbjct: 446 SNSNSGGGGGNGGGGNGGGGNGNGGGAG---DGNGGAGAGNGNGA 487
Score = 27.5 bits (58), Expect = 3.9
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA 258
GGGAG D N G G G G + G G GA
Sbjct: 469 GGGAG---DGNGGAGAGNGNGAGAGNGNGAGAGNGNGA 503
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNR 252
GGG R ++ RGGG R GG R+R
Sbjct: 87 GGGGDRDRSRSRERRRGGGGRDEPRRRGGDDEARSR 122
>U41991-12|AAA83352.1| 251|Caenorhabditis elegans Hypothetical
protein C42D4.1 protein.
Length = 251
Score = 27.1 bits (57), Expect = 5.1
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGR--GGGAGFRSNRSGGVQRGRNRG 255
G G G +F +R GR GGGA R N GG+ G + G
Sbjct: 172 GHGHGHRFHHGRRFGRNIGGGAAPRYN-GGGIGSGISIG 209
>AL117203-10|CAB60424.2| 855|Caenorhabditis elegans Hypothetical
protein Y48C3A.14 protein.
Length = 855
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 181 RTGRGGGAGFRSNRSGGVQRGRNRG 255
R G GGG G GG RGR RG
Sbjct: 830 RRGGGGGRGRGGRGRGGRGRGRGRG 854
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 27.1 bits (57), Expect = 5.1
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 255
GGG GR D+ G GGAG S GG G G
Sbjct: 339 GGGGGRA-DSGGAAGGAGGAGGYSGGGGGGGGGAAAG 374
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 255
GG AG A +G GGG G + GG G G
Sbjct: 348 GGAAGGAGGAGGYSGGGGGGGGGAAAGGGYNAGGGGG 384
>Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical
protein Y41E3.8 protein.
Length = 110
Score = 26.6 bits (56), Expect = 6.8
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +1
Query: 193 GGGAGFRSNRSGGVQRGRNRGA*RNLPTIRG 285
GGG +R N GG GRN G LPT G
Sbjct: 66 GGGNAYRRNGGGGGGGGRNIG---GLPTSSG 93
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGG 231
GGG G N GRGG G R S G
Sbjct: 139 GGGRGGNGGGNNGGGRGGNGGGRPQISAG 167
>AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical
protein M01G5.1 protein.
Length = 889
Score = 26.6 bits (56), Expect = 6.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 160 RKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGA 258
RKF + GR GG G R GG R R+ G+
Sbjct: 835 RKFYPPRVRGRRGGRGRSGGRGGGRGRERDGGS 867
>Z34533-2|CAA84296.1| 166|Caenorhabditis elegans Hypothetical
protein B0285.3 protein.
Length = 166
Score = 26.2 bits (55), Expect = 9.0
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 255
GGG G + + R GRG G GF R GG +N G
Sbjct: 81 GGGGGNQNNYGNR-GRGRG-GFDRGRGGGGGGNKNFG 115
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 154 AGRKFDANKRTGRGGGAGFRSNRSGGVQRG 243
+GRK+ +K +G G G + SG Q+G
Sbjct: 742 SGRKWKKSKAAKQGSGGGSSGSSSGSQQQG 771
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical
protein C04D8.1 protein.
Length = 1317
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 154 AGRKFDANKRTGRGGGAGFRSNRSGGVQRG 243
+GRK+ +K +G G G + SG Q+G
Sbjct: 620 SGRKWKKSKAAKQGSGGGSSGSSSGSQQQG 649
>AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical
protein H05C05.1b protein.
Length = 219
Score = 26.2 bits (55), Expect = 9.0
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 139 RIGGGAGRKFDANKRTGRG--GGAGFRSNRSGG 231
R GGG G+K +++ + RG GG G R +SGG
Sbjct: 141 RGGGGGGQKPSSSRGSARGMRGGGGHR--KSGG 171
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 26.2 bits (55), Expect = 9.0
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 139 RIGGGAGRKFDANKRTGRG--GGAGFRSNRSGG 231
R GGG G+K +++ + RG GG G R +SGG
Sbjct: 645 RGGGGGGQKPSSSRGSARGMRGGGGHR--KSGG 675
>AF067211-9|AAC16994.1| 120|Caenorhabditis elegans Hypothetical
protein B0205.8 protein.
Length = 120
Score = 26.2 bits (55), Expect = 9.0
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = +1
Query: 145 GGGAGRKFDANKRTGRGG----GAGFRSNRSGGVQ-RGRNRG 255
GGG G + + RGG G G R GG Q RG +RG
Sbjct: 54 GGGRGGGYQHRDNSNRGGWVPRGGGQRGGYRGGWQDRGGHRG 95
>AC006676-3|AAK71381.3| 157|Caenorhabditis elegans Hypothetical
protein M04F3.2 protein.
Length = 157
Score = 26.2 bits (55), Expect = 9.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 148 GGAGRKFDANKRTGRGGGAGFRSNRSG 228
GG R D GR GG GFR + G
Sbjct: 130 GGFRRSDDRGGFRGRDGGGGFRGGQGG 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,326,385
Number of Sequences: 27780
Number of extensions: 187236
Number of successful extensions: 1019
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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