Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20475
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   9.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 124 FCTSFIHLNKHLFTL 80
           FC +FI  N HL  L
Sbjct: 182 FCCAFIFFNMHLLFL 196


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +2

Query: 416 DSVFQENKAFVHFKFYAKCHMYGS*LFHCFLYW 514
           D  ++EN+A +   F+A            FLYW
Sbjct: 410 DRHYEENRAPLGLYFHAAWLKNNPEFLDAFLYW 442


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 240 VHYKYYCSIYERCSVVLLFTRALALASNLN 151
           VH K       R  V+++    LA+ +NLN
Sbjct: 404 VHRKIMVQSLGRVGVLVVIIGTLAIIANLN 433


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 411 FSIASSKKIKLLFILNFMLSVIC 479
           F I++   + L+F+ N  L ++C
Sbjct: 235 FLISNISLVSLIFLFNCTLIIMC 257


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 240 VHYKYYCSIYERCSVVLLFTRALALASNLN 151
           VH K       R  V+++    LA+ +NLN
Sbjct: 129 VHRKIMVQSLGRVGVLVVIIGTLAIIANLN 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,305
Number of Sequences: 336
Number of extensions: 2649
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)