Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20467
         (832 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99279-2|CAD89758.1|  500|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z99279-1|CAB16496.4|  598|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U53344-4|AAA96225.2|  575|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z70756-9|CAA94797.1|  275|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z50859-1|CAA90726.1|  208|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z66560-1|CAA91449.1|  214|Caenorhabditis elegans Hypothetical pr...    28   9.4  
U70857-3|AAN84873.1|  950|Caenorhabditis elegans Na/ca exchanger...    28   9.4  
U70857-2|AAM29660.1|  975|Caenorhabditis elegans Na/ca exchanger...    28   9.4  
U70857-1|AAM29661.1|  925|Caenorhabditis elegans Na/ca exchanger...    28   9.4  
U28929-5|AAA68348.2|  438|Caenorhabditis elegans Gaba/glycine re...    28   9.4  
AL132949-28|CAB61106.1|  209|Caenorhabditis elegans Hypothetical...    28   9.4  
AJ001181-1|CAA04574.1|  925|Caenorhabditis elegans sodium-calciu...    28   9.4  
AC024805-15|AAK39331.2|  344|Caenorhabditis elegans Hypothetical...    28   9.4  

>Z99279-2|CAD89758.1|  500|Caenorhabditis elegans Hypothetical
           protein Y57G11A.1b protein.
          Length = 500

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 534 DLSLIASVSSLEASDIDFKKYANVK-RWYETVKSTAPGYQEANEKGLEAFKGLVN 695
           D ++I      E  +++F+   ++K +W E    TA   + A  K LEA KG V+
Sbjct: 78  DPNIIRGSKKAEKVELNFENVGDIKNKWKEGNVETAEAKEAAERKELEALKGGVS 132


>Z99279-1|CAB16496.4|  598|Caenorhabditis elegans Hypothetical
           protein Y57G11A.1a protein.
          Length = 598

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 534 DLSLIASVSSLEASDIDFKKYANVK-RWYETVKSTAPGYQEANEKGLEAFKGLVN 695
           D ++I      E  +++F+   ++K +W E    TA   + A  K LEA KG V+
Sbjct: 78  DPNIIRGSKKAEKVELNFENVGDIKNKWKEGNVETAEAKEAAERKELEALKGGVS 132


>U53344-4|AAA96225.2|  575|Caenorhabditis elegans Hypothetical
           protein T07H6.5 protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 463 PVPSRSWPCRLGHRRILGDRNNH*ISGTKFRCRN 362
           P+   +WP R+ H RIL  +++H  S  K+ C N
Sbjct: 375 PLSCHNWPPRVPHARILFSKSSH-GSIAKYECNN 407


>Z70756-9|CAA94797.1|  275|Caenorhabditis elegans Hypothetical
           protein T06E4.11 protein.
          Length = 275

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = +1

Query: 103 LQGCTADGEGAQLKPEPQTGRPTPRGTAQTRIFEVEPSTHGPDPSR--RWSFNWESRAII 276
           LQG     +  Q+ P+PQ   P+       R  E++    GP P+R  R  F  E++A+ 
Sbjct: 166 LQGSPQGSQQQQMPPQPQQQMPSYNQPEALR-QEIDQIQEGPMPTRGNRLQFGDEAQAVF 224

Query: 277 TYLV 288
           +  V
Sbjct: 225 SKAV 228


>Z50859-1|CAA90726.1|  208|Caenorhabditis elegans Hypothetical
           protein T26C5.1 protein.
          Length = 208

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 21/78 (26%), Positives = 28/78 (35%)
 Frame = +1

Query: 259 ESRAIITYLVNKYAKGSSLYPEDPKARVLVDQRLYFDIGTLYQRFSDYFYPQVFAGAPAD 438
           +S AI  YL  K+        E       VDQ   F     Y    DY+Y  +  G    
Sbjct: 63  QSMAIARYLAKKFGFAGKTAEESAMVDAFVDQFKDF-----YSEIRDYYYTMLGLGLTDL 117

Query: 439 KAKNEKVQEALQLLDKFL 492
               +K +  +   DKFL
Sbjct: 118 DGDEQKDKVLIPARDKFL 135


>Z66560-1|CAA91449.1|  214|Caenorhabditis elegans Hypothetical
           protein D1053.1 protein.
          Length = 214

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 513 GPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETV 626
           G ++T+ADLS+   + S    ++D   Y  V R  ET+
Sbjct: 156 GDDVTIADLSIPPLIYSANRFNLDLSPYPTVNRINETL 193


>U70857-3|AAN84873.1|  950|Caenorhabditis elegans Na/ca exchangers
           protein 2, isoformd protein.
          Length = 950

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 590 LEVNVRGFQAGDTGDETQVG 531
           +EV  RGF+AGD G  T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154


>U70857-2|AAM29660.1|  975|Caenorhabditis elegans Na/ca exchangers
           protein 2, isoforma protein.
          Length = 975

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 590 LEVNVRGFQAGDTGDETQVG 531
           +EV  RGF+AGD G  T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154


>U70857-1|AAM29661.1|  925|Caenorhabditis elegans Na/ca exchangers
           protein 2, isoformb protein.
          Length = 925

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 590 LEVNVRGFQAGDTGDETQVG 531
           +EV  RGF+AGD G  T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154


>U28929-5|AAA68348.2|  438|Caenorhabditis elegans Gaba/glycine
           receptor family (seegbr) protein 3 protein.
          Length = 438

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 486 VPRRSEVRAGPNLTVADLSLIASVSSLEASDIDFKK 593
           VP  + V+    LTV D+S I+ +SS   +D+ F +
Sbjct: 52  VPSNNSVQVSVELTVQDISSISEISSSFIADVWFSQ 87


>AL132949-28|CAB61106.1|  209|Caenorhabditis elegans Hypothetical
           protein Y53F4B.32 protein.
          Length = 209

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +1

Query: 259 ESRAIITYLVNKYAKGSSLYPEDPKARVLVDQRLYFDIGTLYQRF 393
           +S AII YL NK+        E   A  +VDQ  + D  +L++ F
Sbjct: 65  QSAAIIRYLANKFGYAGKTPEEQAWADAIVDQ--FKDFMSLFREF 107


>AJ001181-1|CAA04574.1|  925|Caenorhabditis elegans sodium-calcium
           exchanger protein.
          Length = 925

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 590 LEVNVRGFQAGDTGDETQVG 531
           +EV  RGF+AGD G  T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154


>AC024805-15|AAK39331.2|  344|Caenorhabditis elegans Hypothetical
           protein Y51H7C.13 protein.
          Length = 344

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 535 SATVRFGPARTSDLRGTCPAAEGLPVPSRSWP 440
           S  VR G  ++++++G C   E  PVP+ + P
Sbjct: 258 SEAVRLGLVQSTEIQGVCTRYEPYPVPTENPP 289


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,948,712
Number of Sequences: 27780
Number of extensions: 345699
Number of successful extensions: 1012
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)