Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20464
         (788 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81107-6|CAB03230.1|  342|Caenorhabditis elegans Hypothetical pr...   108   4e-24
Z69790-4|CAA93655.1|  282|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AF016413-1|ABA54422.1|  550|Caenorhabditis elegans Caenorhabditi...    29   3.8  
AB026113-1|BAA84678.1|  550|Caenorhabditis elegans Cfz2 protein.       29   3.8  
AC006615-7|AAK68227.1|  450|Caenorhabditis elegans Hypothetical ...    29   5.0  
L23649-3|AAA27909.2|  601|Caenorhabditis elegans Tyrosinase prot...    28   6.6  
Z81460-5|CAB03832.1|  952|Caenorhabditis elegans Hypothetical pr...    28   8.8  
Z70209-3|CAA94147.1|  952|Caenorhabditis elegans Hypothetical pr...    28   8.8  
Z66511-6|CAA91318.1|  343|Caenorhabditis elegans Hypothetical pr...    28   8.8  

>Z81107-6|CAB03230.1|  342|Caenorhabditis elegans Hypothetical
           protein R07H5.8 protein.
          Length = 342

 Score =  108 bits (260), Expect = 4e-24
 Identities = 51/90 (56%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
 Frame = +3

Query: 243 CSAS-TGTHRSLCANLGAAQHFTPDHLQKEECKKSIEAAKFFYASGFFVAVSPESILLLA 419
           C+A   GTHRSLCA+L AA  FT DHLQKEE +K IE AK+FY +GFF+ V P +IL LA
Sbjct: 122 CAALINGTHRSLCAHLAAANTFTQDHLQKEENQKIIEQAKYFYVTGFFITVCPPAILQLA 181

Query: 420 QHAHDNGHTFVMNLSAPFVSQFYKEPLEKL 509
            H+ +   TF +NLSAPF+SQF+ + L ++
Sbjct: 182 SHSAEFNKTFTLNLSAPFISQFFFDKLSEI 211



 Score =  103 bits (247), Expect = 1e-22
 Identities = 52/121 (42%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
 Frame = +1

Query: 7   EHMPLYSELVDKYNAEYIAGGSVQNSLRVAQWILKKPNICTYFGCVGNDEYAKLLKERAI 186
           +H  +++EL   +  EYI GG+ QNSLRVAQWIL  PN   +FG VG D+Y  LL  +A 
Sbjct: 44  KHNDMFTELTRDFKVEYIPGGAAQNSLRVAQWILNAPNRTVFFGAVGKDQYGDLLASKAK 103

Query: 187 ADGVHVQYQVSNEVATGTCAVLVL-VHTAHCAPISVLHNTSHQIIYRKKNARKALKQRSS 363
             GV+V YQ++  V TGTCA L+   H + CA ++   NT  Q   +K+  +K ++Q   
Sbjct: 104 EAGVNVHYQINETVKTGTCAALINGTHRSLCAHLAAA-NTFTQDHLQKEENQKIIEQAKY 162

Query: 364 F 366
           F
Sbjct: 163 F 163



 Score = 95.5 bits (227), Expect = 4e-20
 Identities = 47/87 (54%), Positives = 64/87 (73%)
 Frame = +2

Query: 503 ETLPYVDVLFGNESEADAFAKAFNINSSDVQEIALRIASMPKLNANRQRVVVITQGCQPV 682
           E +P VDVLFGNE EA AFAKA    ++ V+EIAL+ A++PK  + + R+VV TQG +PV
Sbjct: 210 EIIPLVDVLFGNEDEAAAFAKANGWETTCVKEIALKAAALPK-KSTKPRLVVFTQGPEPV 268

Query: 683 VLVQSGRVTLIPVEALPRERIIDTNGA 763
           ++V+  +VT  PV  LP+E I+DTNGA
Sbjct: 269 IVVEGDKVTEFPVTRLPKEEIVDTNGA 295


>Z69790-4|CAA93655.1|  282|Caenorhabditis elegans Hypothetical
           protein F33C8.3 protein.
          Length = 282

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = +1

Query: 106 LKKPNIC-TYFGCVGNDEYAKLLKERAIADGVHVQYQVSNEVATGTCAVLVLV 261
           L  PN C   F     + YA+ +  R  AD V+     S  +  G C VL +V
Sbjct: 210 LSYPNNCGRSFSQAPLNTYAQFINTRGCADAVYESVSSSLSLIVGVCVVLCIV 262


>AF016413-1|ABA54422.1|  550|Caenorhabditis elegans Caenorhabditis
           frizzled homologprotein 2, isoform b protein.
          Length = 550

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 18/77 (23%), Positives = 29/77 (37%)
 Frame = -2

Query: 553 VCLRFIPEEHVDIWESFSSGSL*NCETKGALKFITNVCPLSCACWANNNIDSGETATKKP 374
           +C+ F  + H  +WE     S    +T G    I ++    C C           +TK  
Sbjct: 465 ICVLFYEQNHRSLWEQSQLCSCSPKQTIGDSSLIISLIKTCCMCILGWTSGFWVCSTKTL 524

Query: 373 EA*KNFAASMLFLHSSF 323
            + KN    ++FL   F
Sbjct: 525 SSWKNAICCLVFLKEKF 541


>AB026113-1|BAA84678.1|  550|Caenorhabditis elegans Cfz2 protein.
          Length = 550

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 18/77 (23%), Positives = 29/77 (37%)
 Frame = -2

Query: 553 VCLRFIPEEHVDIWESFSSGSL*NCETKGALKFITNVCPLSCACWANNNIDSGETATKKP 374
           +C+ F  + H  +WE     S    +T G    I ++    C C           +TK  
Sbjct: 465 ICVLFYEQNHRSLWEQSQLCSCSPKQTIGDSSLIISLIKTCCMCILGWTSGFWVCSTKTL 524

Query: 373 EA*KNFAASMLFLHSSF 323
            + KN    ++FL   F
Sbjct: 525 SSWKNAICCLVFLKEKF 541


>AC006615-7|AAK68227.1|  450|Caenorhabditis elegans Hypothetical
           protein C36B7.1 protein.
          Length = 450

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = -3

Query: 438 HYR-AHAG---PITISTLEKLPQRNQKHKRTSLLQCF 340
           HY+ AH     P+T S + KLP  NQK     L++CF
Sbjct: 388 HYKLAHPSRKPPLTSSLVSKLPGGNQKFLARFLMRCF 424


>L23649-3|AAA27909.2|  601|Caenorhabditis elegans Tyrosinase protein
           1 protein.
          Length = 601

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 232 TGTCAVLVLVHTA-HC--APISVLHNTSHQIIYRKKNARKALKQRSSF 366
           +GT AV+  VH   +C  AP S +  T H +      ARKA+++R +F
Sbjct: 11  SGTLAVISTVHADFNCSQAPDSDMVQTCHMLQEWDSAARKAIRKRQAF 58


>Z81460-5|CAB03832.1|  952|Caenorhabditis elegans Hypothetical
           protein C04A11.4 protein.
          Length = 952

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 366 YASGFFVAVSPESILLLAQHAHDNGHTFVMN 458
           Y+ G +V  + +++  +A  AH+ GHTF M+
Sbjct: 291 YSGGIYVDHNNDTVETVATFAHELGHTFGMD 321


>Z70209-3|CAA94147.1|  952|Caenorhabditis elegans Hypothetical
           protein C04A11.4 protein.
          Length = 952

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 366 YASGFFVAVSPESILLLAQHAHDNGHTFVMN 458
           Y+ G +V  + +++  +A  AH+ GHTF M+
Sbjct: 291 YSGGIYVDHNNDTVETVATFAHELGHTFGMD 321


>Z66511-6|CAA91318.1|  343|Caenorhabditis elegans Hypothetical
           protein F07A11.5 protein.
          Length = 343

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 24/85 (28%), Positives = 39/85 (45%)
 Frame = +2

Query: 509 LPYVDVLFGNESEADAFAKAFNINSSDVQEIALRIASMPKLNANRQRVVVITQGCQPVVL 688
           L  VD++  NE+EA+        N  D ++ A  +  M   +A      +IT G + V+L
Sbjct: 209 LELVDIICTNENEAEFITGIAQNNVKDAEKAARAMLKMGPQHA------IITLGGKGVLL 262

Query: 689 VQSGRVTLIPVEALPRERIIDTNGA 763
              G V  +   A+ +   +DT GA
Sbjct: 263 ASKG-VDDVEHTAVIKVDAVDTTGA 286


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,869,345
Number of Sequences: 27780
Number of extensions: 405619
Number of successful extensions: 1190
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)