Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20464
         (788 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   4.3  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   7.5  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   7.5  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   9.9  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 14  CHSTRNSLTSIMQSILLVEAFRIH*E 91
           C S++NS  SIMQ   + E   ++ E
Sbjct: 623 CQSSKNSENSIMQRASMKENLNVYPE 648


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 720 TGIRVTRPLCTSTTG 676
           TGI+  +P+C   TG
Sbjct: 24  TGIQTLQPICVGETG 38


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +1

Query: 268 AHCAPISVLHNTSHQIIYRKKNARKALKQRSSFMLLVSL 384
           ++C P+ ++     QI+    N  KAL++++  M + SL
Sbjct: 219 SYCIPMILIIYYYSQIVSHVVNHEKALREQAKKMNVDSL 257


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 67  HQQYTLHYTCQRVPSRV 17
           HQQ    Y C+R+ +R+
Sbjct: 238 HQQIMARYNCERLCNRL 254


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 717 GIRVTRPLCTSTTGWQP 667
           GIR+  P   S T W P
Sbjct: 506 GIRLAAPFNASPTTWSP 522


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,513
Number of Sequences: 438
Number of extensions: 4678
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)