Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20456
         (763 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    74   6e-13
BC126358-1|AAI26359.1| 1059|Homo sapiens acyl-Coenzyme A dehydro...    32   1.9  
AY323912-1|AAQ88260.1| 1059|Homo sapiens ACAD 10 protein.              32   1.9  
AK097425-1|BAC05046.1|  492|Homo sapiens protein ( Homo sapiens ...    32   1.9  
AK092356-1|BAC03869.1|  890|Homo sapiens protein ( Homo sapiens ...    31   4.5  
AL121990-7|CAI22015.1|  589|Homo sapiens TAF5-like RNA polymeras...    30   7.8  
AJ009770-1|CAA08816.1|  260|Homo sapiens putative transcription ...    30   7.8  
AF069736-1|AAC39906.1|  589|Homo sapiens PCAF associated factor ...    30   7.8  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 73.7 bits (173), Expect = 6e-13
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = -1

Query: 232 MIGRADIEGSKSNVAMNAWLPQASYPCGNFSGTSC*K 122
           MIGRADIEGSKS+VAMNAW PQASYPCGNFS TSC K
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSCLK 37


>BC126358-1|AAI26359.1| 1059|Homo sapiens acyl-Coenzyme A
           dehydrogenase family, member 10 protein.
          Length = 1059

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
 Frame = +3

Query: 375 PQFRTFGSCTRPSGRWCELPSAGLCLNASKAEASLAESGKDMLTVSPES-----REALNN 539
           P  R++ +  RP  +WC   S      +S  EAS A + +  L +SPES     RE  + 
Sbjct: 613 PLTRSYHTWARPQSQWCPTGSRSY---SSVPEASPAHTSRGGLVISPESLSPPVRELYHR 669

Query: 540 VTLLVAFRIQNARRHVEAH 596
           +   +  R+  A   +++H
Sbjct: 670 LKHFMEQRVYPAEPELQSH 688


>AY323912-1|AAQ88260.1| 1059|Homo sapiens ACAD 10 protein.
          Length = 1059

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
 Frame = +3

Query: 375 PQFRTFGSCTRPSGRWCELPSAGLCLNASKAEASLAESGKDMLTVSPES-----REALNN 539
           P  R++ +  RP  +WC   S      +S  EAS A + +  L +SPES     RE  + 
Sbjct: 613 PLTRSYHTWARPQSQWCPTGSRSY---SSVPEASPAHTSRGGLVISPESLSPPVRELYHR 669

Query: 540 VTLLVAFRIQNARRHVEAH 596
           +   +  R+  A   +++H
Sbjct: 670 LKHFMEQRVYPAEPELQSH 688


>AK097425-1|BAC05046.1|  492|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40106 fis, clone TESTI2006667, moderately
           similar to Probable acyl-CoA dehydrogenase. ).
          Length = 492

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
 Frame = +3

Query: 375 PQFRTFGSCTRPSGRWCELPSAGLCLNASKAEASLAESGKDMLTVSPES-----REALNN 539
           P  R++ +  RP  +WC   S      +S  EAS A + +  L +SPES     RE  + 
Sbjct: 215 PLTRSYHTWARPQSQWCPTGSRSY---SSVPEASPAHTSRGGLVISPESLSPPVRELYHR 271

Query: 540 VTLLVAFRIQNARRHVEAH 596
           +   +  R+  A   +++H
Sbjct: 272 LKHFMEQRVYPAEPELQSH 290


>AK092356-1|BAC03869.1|  890|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35037 fis, clone OCBBF2016729, moderately
           similar to Probable acyl-CoA dehydrogenase - Deinococcus
           radiodurans. ).
          Length = 890

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +3

Query: 375 PQFRTFGSCTRPSGRWCELPSAGLCLNASKAEASLAESGKDMLTVSPES 521
           P  R++ +  RP  +WC   S      +S  EAS A + +  L +SPES
Sbjct: 613 PLTRSYHTWARPQSQWCPTGSRSY---SSVPEASPAHTSRGGLVISPES 658


>AL121990-7|CAI22015.1|  589|Homo sapiens TAF5-like RNA polymerase
           II, p300/CBP-associated factor (PCAF)-associated facto
           protein.
          Length = 589

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = -1

Query: 565 MRNATSKVTLFRASRLSGLTVSISLPDSARLASALEAFRHNPADGSS 425
           +R  T  +T    S  SGL  S S+ +S R+      +   PADGSS
Sbjct: 506 LRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSS 552


>AJ009770-1|CAA08816.1|  260|Homo sapiens putative transcription
           factor protein.
          Length = 260

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = -1

Query: 565 MRNATSKVTLFRASRLSGLTVSISLPDSARLASALEAFRHNPADGSS 425
           +R  T  +T    S  SGL  S S+ +S R+      +   PADGSS
Sbjct: 177 LRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSS 223


>AF069736-1|AAC39906.1|  589|Homo sapiens PCAF associated factor 65
           beta protein.
          Length = 589

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = -1

Query: 565 MRNATSKVTLFRASRLSGLTVSISLPDSARLASALEAFRHNPADGSS 425
           +R  T  +T    S  SGL  S S+ +S R+      +   PADGSS
Sbjct: 506 LRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSS 552


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,836,021
Number of Sequences: 237096
Number of extensions: 2498886
Number of successful extensions: 5186
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5177
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)