Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20455
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    25   0.80 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   5.6  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   5.6  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   7.4  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   7.4  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
 Frame = +2

Query: 392 TVHTGVSKVIRNRLSEPGAENIKVICVG-DKSRGILQRLYESTSLVLLMRLDVSHYFLDA 568
           T H  +S++  +     G  N++++    ++ R +   L+  T L    RLDVSH  L  
Sbjct: 303 TSHNRISEIPNDLFRFLG--NLRIVDFSHNRLRSLPDNLFRETGLE---RLDVSHNLLGK 357

Query: 569 SQLATAILTSGYEFGSGKIIYNKFKSV 649
             L +  L S        + +N   S+
Sbjct: 358 LPLTSLSLASAQTLSELDLSWNSISSL 384


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 328 TPPEDDPKQLFVAMTSDRGLS 390
           TPPEDD + L  +++S   LS
Sbjct: 668 TPPEDDAESLNQSISSPGALS 688


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 328 TPPEDDPKQLFVAMTSDRGLS 390
           TPPEDD + L  +++S   LS
Sbjct: 560 TPPEDDAESLNQSISSPGALS 580


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 289 GEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLSD 393
           GEGA     RA +   ED+  Q+ V M  +   S+
Sbjct: 458 GEGAFGIVRRAFLDLKEDNKTQVAVKMLKESPTSE 492


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 276 SFQVTLSRVYLAADTIFMDCVIFWIFFTDL 187
           SF      + LAA  IF D V++ +  +DL
Sbjct: 137 SFWAVTIFLVLAASVIFFDVVVWGLSASDL 166


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 429 VSANLVLRTSR*SVWEINLAVSCRDCTKAHH 521
           V+  + L  SR  VW  N    CR   K H+
Sbjct: 102 VALKINLPESRVQVWFKNRRAKCRQQQKQHN 132



 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 93  ASDRVWAPKSWRWFTISQTGIW 158
           A+  +W+P S   FT+ Q   W
Sbjct: 214 ANSSIWSPASIDSFTLEQHRSW 235


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = -3

Query: 228 FMDCVIFWIFFTDLRRMEMAFKVAIFLF 145
           ++ C+ +W+     + ++   + A+FLF
Sbjct: 292 YVMCIWYWLDRESAKNVDQRIQKALFLF 319


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = -3

Query: 228 FMDCVIFWIFFTDLRRMEMAFKVAIFLF 145
           ++ C+ +W+     + ++   + A+FLF
Sbjct: 292 YVMCIWYWLDRESAKNVDQRIQKALFLF 319


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,106
Number of Sequences: 336
Number of extensions: 4445
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)