Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20455
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical ... 115 4e-26
AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical ... 115 4e-26
AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical ... 84 1e-16
U80453-4|AAK31441.2| 674|Caenorhabditis elegans Trehalase prote... 32 0.46
AJ512339-1|CAD54512.1| 674|Caenorhabditis elegans trehalase pro... 32 0.46
Z81043-5|CAB02802.2| 278|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z78067-9|CAB01528.2| 450|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z75543-1|CAA99867.1| 314|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z70312-6|CAA94387.1| 807|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z70309-14|CAA94363.1| 807|Caenorhabditis elegans Hypothetical p... 28 5.7
U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical p... 28 7.5
U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical pr... 28 7.5
AC024201-4|AAK93867.2| 534|Caenorhabditis elegans Hypothetical ... 28 7.5
Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical pr... 27 9.9
U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter... 27 9.9
U29535-14|AAK31455.3| 516|Caenorhabditis elegans Hypothetical p... 27 9.9
J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein. 27 9.9
>AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18a protein.
Length = 299
Score = 115 bits (276), Expect = 4e-26
Identities = 75/179 (41%), Positives = 105/179 (58%), Gaps = 6/179 (3%)
Frame = +2
Query: 149 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTLLSVT*KLLVPM---VKVQYSSMKG 319
R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY K K + ++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 320 LRLHLPKMTPSNCLLL*PLTE--VCRTVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGI 493
+ + K +L+ ++ +C VH+ + K +N L+ G + I+V+ +GDKSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 494 LQRLYESTSLVLLMRLD-VSHYFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQS 667
LQRLY ++ L+ + F DAS A AIL SGY+F +G I++N+FK+VVSY S
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGYDFETGTILFNRFKTVVSYETS 201
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +1
Query: 256 AERDLKAARPYGEGAVQFYER----AEVTPPEDDPKQLFVAMTSDRGLSDCTH 402
AER+LK AR YG GA F++ E ++ KQ+ V +TSDRGL H
Sbjct: 59 AERELKGARAYGVGAKTFFDNIDPVVEGVEKQESKKQVLVLITSDRGLCGGVH 111
>AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18b protein.
Length = 313
Score = 115 bits (276), Expect = 4e-26
Identities = 75/179 (41%), Positives = 105/179 (58%), Gaps = 6/179 (3%)
Frame = +2
Query: 149 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTLLSVT*KLLVPM---VKVQYSSMKG 319
R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY K K + ++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 320 LRLHLPKMTPSNCLLL*PLTE--VCRTVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGI 493
+ + K +L+ ++ +C VH+ + K +N L+ G + I+V+ +GDKSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 494 LQRLYESTSLVLLMRLD-VSHYFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQS 667
LQRLY ++ L+ + F DAS A AIL SGY+F +G I++N+FK+VVSY S
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGYDFETGTILFNRFKTVVSYETS 201
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +1
Query: 256 AERDLKAARPYGEGAVQFYER----AEVTPPEDDPKQLFVAMTSDRGLSDCTH 402
AER+LK AR YG GA F++ E ++ KQ+ V +TSDRGL H
Sbjct: 59 AERELKGARAYGVGAKTFFDNIDPVVEGVEKQESKKQVLVLITSDRGLCGGVH 111
>AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18c protein.
Length = 200
Score = 83.8 bits (198), Expect = 1e-16
Identities = 61/154 (39%), Positives = 85/154 (55%), Gaps = 6/154 (3%)
Frame = +2
Query: 149 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTLLSVT*K---LLVPMVKVQYSSMKG 319
R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY K K + ++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 320 LRLHLPKMTPSNCLLL*PLTE--VCRTVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGI 493
+ + K +L+ ++ +C VH+ + K +N L+ G + I+V+ +GDKSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 494 LQRLYESTSLVLLMRLD-VSHYFLDASQLATAIL 592
LQRLY ++ L+ + F DAS A AIL
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAIL 176
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +1
Query: 256 AERDLKAARPYGEGAVQFYER----AEVTPPEDDPKQLFVAMTSDRGLSDCTH 402
AER+LK AR YG GA F++ E ++ KQ+ V +TSDRGL H
Sbjct: 59 AERELKGARAYGVGAKTFFDNIDPVVEGVEKQESKKQVLVLITSDRGLCGGVH 111
>U80453-4|AAK31441.2| 674|Caenorhabditis elegans Trehalase protein
5 protein.
Length = 674
Score = 31.9 bits (69), Expect = 0.46
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = -3
Query: 540 NLISNTNDVLSYNLCRIPRDLSPTQITLMFSAPGSLRRLRITLDTPVCTVRQTSVRGHSN 361
+LI +D L YN I L +Q T M S+P S L I + T + T +S G+SN
Sbjct: 603 DLIFTYSDRLQYN-GPILESLVGSQTTSMKSSPDSSTSLPIDITTTITTSSSSSTFGYSN 661
Query: 360 KQLLGVIF 337
L +F
Sbjct: 662 ILTLITVF 669
>AJ512339-1|CAD54512.1| 674|Caenorhabditis elegans trehalase
protein.
Length = 674
Score = 31.9 bits (69), Expect = 0.46
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = -3
Query: 540 NLISNTNDVLSYNLCRIPRDLSPTQITLMFSAPGSLRRLRITLDTPVCTVRQTSVRGHSN 361
+LI +D L YN I L +Q T M S+P S L I + T + T +S G+SN
Sbjct: 603 DLIFTYSDRLQYN-GPILESLVGSQTTSMKSSPDSSTSLPIDITTTITTSSSSSTFGYSN 661
Query: 360 KQLLGVIF 337
L +F
Sbjct: 662 ILTLITVF 669
>Z81043-5|CAB02802.2| 278|Caenorhabditis elegans Hypothetical
protein C29F3.6 protein.
Length = 278
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = -3
Query: 330 CNLSPFIELYCTFTI-GTSSFQVT---LSRVYLAADTIFMDCVIFWIFFTDLRRMEMAFK 163
C+L I L+C F+I S+F+ + LS AD ++ +F+ F D + F+
Sbjct: 19 CSLGVLINLFCIFSICKLSAFKNSFGYLSANQAFADALYSSLYLFYFCFMDFLDV-FLFQ 77
Query: 162 VAIFLFG 142
+F+FG
Sbjct: 78 ENVFIFG 84
>Z78067-9|CAB01528.2| 450|Caenorhabditis elegans Hypothetical
protein ZC412.1 protein.
Length = 450
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 332 LPKMTPSNCLLL*PLTEVCRTVHTGVSKVIRNR 430
LP+ SNC LL PL +C++V S + NR
Sbjct: 392 LPRELQSNCFLLVPLMPLCQSVTRKNSHLAINR 424
>Z75543-1|CAA99867.1| 314|Caenorhabditis elegans Hypothetical
protein K01D12.1 protein.
Length = 314
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 104 PVRSVPTFCKFYGCLSVKFTSRRKN 30
PV PTF FY C+ K S R N
Sbjct: 52 PVEGTPTFKAFYNCVYPKLASLRGN 76
>Z70312-6|CAA94387.1| 807|Caenorhabditis elegans Hypothetical
protein ZC168.1 protein.
Length = 807
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -3
Query: 348 GVIFGRCNLSPF-IELYCTFTIGTSSFQVTLSRVYLAADTIFMDCVIFWIF 199
G I G + F I C F +GT + ++ L RV++ F W+F
Sbjct: 127 GTIVGSAAFNLFCISAICVFAVGTQTKRIELYRVFVVT-AFFGTFAYIWVF 176
>Z70309-14|CAA94363.1| 807|Caenorhabditis elegans Hypothetical
protein ZC168.1 protein.
Length = 807
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -3
Query: 348 GVIFGRCNLSPF-IELYCTFTIGTSSFQVTLSRVYLAADTIFMDCVIFWIF 199
G I G + F I C F +GT + ++ L RV++ F W+F
Sbjct: 127 GTIVGSAAFNLFCISAICVFAVGTQTKRIELYRVFVVT-AFFGTFAYIWVF 176
>U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical
protein D2092.1a protein.
Length = 804
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 107 VGTQVVAVVYDQ-PNRNMATLKAISIRLKSVKNIQKITQSMK 229
+ T + +YD+ PN L + I LKS++N QK +K
Sbjct: 503 IHTCLQVTIYDEDPNNRFEFLGRVQIPLKSIRNCQKRWYGLK 544
>U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical
protein D2092.1b protein.
Length = 890
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 107 VGTQVVAVVYDQ-PNRNMATLKAISIRLKSVKNIQKITQSMK 229
+ T + +YD+ PN L + I LKS++N QK +K
Sbjct: 589 IHTCLQVTIYDEDPNNRFEFLGRVQIPLKSIRNCQKRWYGLK 630
>AC024201-4|AAK93867.2| 534|Caenorhabditis elegans Hypothetical
protein Y71F9B.6 protein.
Length = 534
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +2
Query: 284 PMVKVQYSSMKGLRLHLPKMTPSNCLLL*PLTEVCRTVHTGVSKVIRNRLSEPGAENIKV 463
PM+ + S MK L+ + ++ SN + + + T + K+I +LSE +N+K+
Sbjct: 377 PMIHLTLSKMKSLKREMAELGVSNGIDVYTVA----TAYVYFEKIILKKLSENSRKNLKM 432
Query: 464 I 466
+
Sbjct: 433 V 433
>Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical
protein B0491.2 protein.
Length = 324
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -1
Query: 539 ISLATLMMCFRTISAGYREI 480
+++ATLM+CF T+S Y E+
Sbjct: 13 VTVATLMVCFMTMSTIYSEV 32
>U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 2 protein.
Length = 380
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -1
Query: 152 SCLADR--KPPPRLGCPHPVRSVPTFCKFYG 66
SC+ +R +PPP L CP R VP F G
Sbjct: 156 SCIPERVFEPPPCLPCPQGPRGVPGHPGFPG 186
>U29535-14|AAK31455.3| 516|Caenorhabditis elegans Hypothetical
protein C25H3.4 protein.
Length = 516
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 383 VCRTVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGILQRLYES 514
+C + TGV+ + ++ PG E +V+ G++ I L +S
Sbjct: 454 ICHQIQTGVATSVTSQWEVPGVEGPQVLVQGNQIHFIADLLIKS 497
>J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein.
Length = 324
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -1
Query: 539 ISLATLMMCFRTISAGYREI 480
+++ATLM+CF T+S Y E+
Sbjct: 13 VTVATLMVCFMTMSTIYSEV 32
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,031,689
Number of Sequences: 27780
Number of extensions: 415030
Number of successful extensions: 1058
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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