Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20453
         (385 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5CU56 Cluster: Cation-transporting ATPase; n=2; Crypto...    33   2.5  
UniRef50_Q244X8 Cluster: Putative uncharacterized protein; n=1; ...    32   3.3  
UniRef50_Q06694 Cluster: Uncharacterized 26.9 kDa protein in GP4...    32   4.3  

>UniRef50_Q5CU56 Cluster: Cation-transporting ATPase; n=2;
           Cryptosporidium|Rep: Cation-transporting ATPase -
           Cryptosporidium parvum Iowa II
          Length = 1431

 Score = 32.7 bits (71), Expect = 2.5
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -2

Query: 327 CYKALKLHKILDCFFDPFYSMTKLLN 250
           C K  KL+KIL  F DPF  ++++LN
Sbjct: 183 CKKQTKLNKILSLFLDPFNKLSRVLN 208


>UniRef50_Q244X8 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 6523

 Score = 32.3 bits (70), Expect = 3.3
 Identities = 20/70 (28%), Positives = 33/70 (47%)
 Frame = -3

Query: 224  IETFRFLQAVDIITIKTTLRFNLANFC*NYNNIISVNTQTVKYSKHWK*YNDYKKRH*TA 45
            I+   FL  V +I+    + F + N C +  +I+  N   +K S+HW  Y  +  R   +
Sbjct: 2197 IQNCEFLN-VGMISTLANIIFQIRNSCISKTDILDSNNCPIKVSEHWGLYASFTVRQ-DS 2254

Query: 44   QVVLIISKPN 15
            QV+     PN
Sbjct: 2255 QVLQFSQIPN 2264


>UniRef50_Q06694 Cluster: Uncharacterized 26.9 kDa protein in
           GP41-PNK intergenic region; n=11;
           Nucleopolyhedrovirus|Rep: Uncharacterized 26.9 kDa
           protein in GP41-PNK intergenic region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 233

 Score = 31.9 bits (69), Expect = 4.3
 Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = +1

Query: 97  YLTVCVFTEIILL*FQ-QKFARLNLKVVLIVIMSTACKNRNV 219
           + TV +   I+LL F  +KF+ +NL ++L++++S  C N  +
Sbjct: 172 FQTVLLTCAILLLLFNVEKFSMINLLIILLILLSLFCHNNYI 213


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 289,194,668
Number of Sequences: 1657284
Number of extensions: 4855908
Number of successful extensions: 9036
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9035
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15293670012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)