Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20453
         (385 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   4.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   5.6  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    20   9.7  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    20   9.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 61  FL*SLYYFQCFEYLTVCVF 117
           FL  +YYF C   + +C++
Sbjct: 281 FLLCIYYFYCALIILLCIY 299


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 169 KVVLIVIMSTACKNRNVSIYLLYNVN 246
           K+ L +I+   C  RN+S  ++YN N
Sbjct: 3   KITLFMII--ICFERNLSYKVMYNGN 26


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 47  QFNVAFYNHYIISN 88
           QF V FY+ Y++++
Sbjct: 126 QFGVGFYSAYLVAD 139


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 145 QKFARLNLKVVLIVIMSTAC 204
           QK     LKV+  VI+ T C
Sbjct: 24  QKLTLSPLKVLQTVILGTTC 43


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 145 QKFARLNLKVVLIVIMSTAC 204
           QK     LKV+  VI+ T C
Sbjct: 24  QKLTLSPLKVLQTVILGTTC 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,275
Number of Sequences: 336
Number of extensions: 1562
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)