Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20453
         (385 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0114 + 25958834-25961296                                         29   1.7  
11_06_0621 + 25587476-25587604,25588230-25588423,25588800-255888...    27   5.1  

>02_05_0114 + 25958834-25961296
          Length = 820

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +1

Query: 76  YYFQCFEYLTVCVFTEIILL*FQQKFARLNL-KVVLIVIMSTACKNRNVS 222
           Y  QCF  L +   +E+I    + K + L+L KV+  + M T CKN N++
Sbjct: 369 YLLQCFRKLGMT--SEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMN 416


>11_06_0621 +
           25587476-25587604,25588230-25588423,25588800-25588874,
           25589434-25591852
          Length = 938

 Score = 27.1 bits (57), Expect = 5.1
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +1

Query: 76  YYFQCFEYLTVCVFTEIILL*FQQKFARLNLKVVLIVIMSTACKNRNVS 222
           Y  QCF  L +        L F+     L+ KV+  + M T CKN N++
Sbjct: 487 YLLQCFRKLGMTSEAIAYFLKFKDSGLHLD-KVIYNIAMDTYCKNGNMN 534


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,975,743
Number of Sequences: 37544
Number of extensions: 104691
Number of successful extensions: 162
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 636799876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)