Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20452
         (484 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    25   1.0  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   5.5  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    22   9.6  

>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 25.4 bits (53), Expect = 1.0
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 296 SFELPESNIDCDTTSRSAFSLSNT 225
           +F LP+SN +C T +R   S  NT
Sbjct: 142 NFHLPKSNRNCRTAARRNHSSRNT 165


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 282 WKFETSKYYVTIIDAPG 332
           W +E  K+  T+I+ PG
Sbjct: 487 WNYEDYKFRTTVINMPG 503


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 157 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 252
           KR I +FE E  +      K+    D LKAER
Sbjct: 319 KRKIGEFEVERDQAAGILAKHDETYDALKAER 350


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 496,722
Number of Sequences: 2352
Number of extensions: 9340
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)