Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20452
(484 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 144 4e-37
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 144 4e-37
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 89 2e-20
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 79 2e-17
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.32
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.74
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 2.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 3.0
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 6.9
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 6.9
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 6.9
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 144 bits (349), Expect = 4e-37
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +1
Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 231
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 232 DKLKAERD 255
DKLKAER+
Sbjct: 61 DKLKAERE 68
Score = 88.2 bits (209), Expect = 4e-20
Identities = 44/73 (60%), Positives = 53/73 (72%)
Frame = +3
Query: 156 QTYHREVREGGPGNG*RILQICLGIGQTKG*A*RGITIDIALWKFETSKYYVTIIDAPGH 335
+ + +E +E G G+ + + + K RGITIDIALWKFET+KYYVTIIDAPGH
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGH 95
Query: 336 RDFIKNMITGTSQ 374
RDFIKNMITGTSQ
Sbjct: 96 RDFIKNMITGTSQ 108
Score = 73.3 bits (172), Expect = 1e-15
Identities = 35/37 (94%), Positives = 35/37 (94%)
Frame = +2
Query: 374 ADCAVLIVAAGTGEFEAGISKNGQTREHALLDFTLGV 484
ADCAVLIVAAG GEFEAGISKNGQTREHALL FTLGV
Sbjct: 109 ADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGV 145
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 144 bits (349), Expect = 4e-37
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +1
Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 231
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 232 DKLKAERD 255
DKLKAER+
Sbjct: 61 DKLKAERE 68
Score = 89.4 bits (212), Expect = 2e-20
Identities = 45/73 (61%), Positives = 53/73 (72%)
Frame = +3
Query: 156 QTYHREVREGGPGNG*RILQICLGIGQTKG*A*RGITIDIALWKFETSKYYVTIIDAPGH 335
+ + +E +E G G+ + + + K RGITIDIALWKFETSKYYVTIIDAPGH
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 95
Query: 336 RDFIKNMITGTSQ 374
RDFIKNMITGTSQ
Sbjct: 96 RDFIKNMITGTSQ 108
Score = 75.8 bits (178), Expect = 2e-16
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +2
Query: 374 ADCAVLIVAAGTGEFEAGISKNGQTREHALLDFTLGV 484
ADCAVLIVAAGTGEFEAGISKNGQTREHALL FTLGV
Sbjct: 109 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 145
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 89.0 bits (211), Expect = 2e-20
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +3
Query: 255 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 374
RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ
Sbjct: 12 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 51
Score = 75.8 bits (178), Expect = 2e-16
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +2
Query: 374 ADCAVLIVAAGTGEFEAGISKNGQTREHALLDFTLGV 484
ADCAVLIVAAGTGEFEAGISKNGQTREHALL FTLGV
Sbjct: 52 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 88
Score = 26.2 bits (55), Expect = 0.18
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1
Query: 223 WVLDKLKAERD 255
WVLDKLKAER+
Sbjct: 1 WVLDKLKAERE 11
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 79.4 bits (187), Expect = 2e-17
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 270 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 374
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 35
Score = 75.8 bits (178), Expect = 2e-16
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +2
Query: 374 ADCAVLIVAAGTGEFEAGISKNGQTREHALLDFTLGV 484
ADCAVLIVAAGTGEFEAGISKNGQTREHALL FTLGV
Sbjct: 36 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 72
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.4 bits (53), Expect = 0.32
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 64 KTHINIVVIGHVDSGKST 117
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
Score = 22.2 bits (45), Expect = 3.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 309 VTIIDAPGHRDFI 347
VT +D PGH FI
Sbjct: 195 VTFLDTPGHAAFI 207
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.74
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 73 INIVVIGHVDSGKST 117
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 22.6 bits (46), Expect = 2.3
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 65 FSLPIFG*SRITNCL*Y 15
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 3.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 472 EIEQGMLTGLTVLRDTSFEFTGTGSYDE 389
EI LTGLTVLR + + S E
Sbjct: 251 EIAGDALTGLTVLRTFNASYNSLDSLPE 278
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 154 DKRTIEKFEKEAQEMG 201
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 154 DKRTIEKFEKEAQEMG 201
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 154 DKRTIEKFEKEAQEMG 201
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,300
Number of Sequences: 438
Number of extensions: 2644
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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