Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20450
(798 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81198-1|CAA57072.1| 472|Homo sapiens archain protein. 142 2e-33
X81197-1|CAA57071.1| 511|Homo sapiens archain protein. 142 2e-33
BC093638-1|AAH93638.1| 511|Homo sapiens archain protein. 142 2e-33
BC093636-1|AAH93636.1| 511|Homo sapiens archain 1 protein. 142 2e-33
BC064936-1|AAH64936.1| 189|Homo sapiens ARCN1 protein protein. 141 2e-33
M21616-1|AAA36427.1| 1106|Homo sapiens platelet-derived growth f... 35 0.30
J03278-1|AAA60049.1| 1106|Homo sapiens platelet-derived growth f... 35 0.30
BC032224-1|AAH32224.1| 1106|Homo sapiens platelet-derived growth... 35 0.30
AB209657-1|BAD92894.1| 777|Homo sapiens platelet-derived growth... 35 0.30
Y08387-1|CAA69667.1| 453|Homo sapiens mu-adaptin-related protei... 34 0.52
BC018705-1|AAH18705.1| 453|Homo sapiens AP4M1 protein protein. 34 0.52
AF155158-1|AAD43328.1| 453|Homo sapiens adaptor-related protein... 34 0.52
AF020796-1|AAD25869.1| 453|Homo sapiens mu-adaptin-related prot... 34 0.52
BX640759-1|CAE45865.1| 192|Homo sapiens hypothetical protein pr... 33 0.90
M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear pro... 30 8.4
BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein pr... 30 8.4
BC150287-1|AAI50288.1| 1922|Homo sapiens Dicer1, Dcr-1 homolog (... 30 8.4
BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor, argini... 30 8.4
BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein. 30 8.4
BC002784-1|AAH02784.1| 321|Homo sapiens SFRS11 protein protein. 30 8.4
AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor, argini... 30 8.4
AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor, argini... 30 8.4
AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor, argini... 30 8.4
AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor, argini... 30 8.4
AJ132261-1|CAB38857.2| 1912|Homo sapiens hypothetical helicase K... 30 8.4
AB028449-1|BAA78691.1| 1924|Homo sapiens helicase-MOI protein. 30 8.4
AB023145-1|BAA76772.2| 1922|Homo sapiens KIAA0928 protein protein. 30 8.4
>X81198-1|CAA57072.1| 472|Homo sapiens archain protein.
Length = 472
Score = 142 bits (343), Expect = 2e-33
Identities = 75/147 (51%), Positives = 98/147 (66%)
Frame = +3
Query: 192 INDRRTATYIC*NRVRQICLPPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLT 371
+N + T++ VR + P++KLYM+LITTK SNILEDLETLRLFSRV+PEYC L
Sbjct: 1 MNTGKQHTFVETESVRYV-YQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALE 59
Query: 372 ETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYKP*GRPKNARRRTA 551
E E+ F+L+FAFDEIVALGYRE+VNLAQ+R+F EMDSHEEK+++ + + R A
Sbjct: 60 ENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFR---AVRETQEREA 116
Query: 552 CANALRSCSARDWRRPNVASRRAHRCP 632
A R R + A R+ + P
Sbjct: 117 KAEMRRKAKELQQARRD-AERQGKKAP 142
>X81197-1|CAA57071.1| 511|Homo sapiens archain protein.
Length = 511
Score = 142 bits (343), Expect = 2e-33
Identities = 75/147 (51%), Positives = 98/147 (66%)
Frame = +3
Query: 192 INDRRTATYIC*NRVRQICLPPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLT 371
+N + T++ VR + P++KLYM+LITTK SNILEDLETLRLFSRV+PEYC L
Sbjct: 40 MNTGKQHTFVETESVRYV-YQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALE 98
Query: 372 ETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYKP*GRPKNARRRTA 551
E E+ F+L+FAFDEIVALGYRE+VNLAQ+R+F EMDSHEEK+++ + + R A
Sbjct: 99 ENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFR---AVRETQEREA 155
Query: 552 CANALRSCSARDWRRPNVASRRAHRCP 632
A R R + A R+ + P
Sbjct: 156 KAEMRRKAKELQQARRD-AERQGKKAP 181
Score = 105 bits (252), Expect = 2e-22
Identities = 49/58 (84%), Positives = 54/58 (93%)
Frame = +1
Query: 79 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVY 252
MVL+AA VCTK+GKA+VSRQFVEMT+ RIEGLLAAFPKLM G+QHTFVETESVRYVY
Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVY 58
>BC093638-1|AAH93638.1| 511|Homo sapiens archain protein.
Length = 511
Score = 142 bits (343), Expect = 2e-33
Identities = 75/147 (51%), Positives = 98/147 (66%)
Frame = +3
Query: 192 INDRRTATYIC*NRVRQICLPPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLT 371
+N + T++ VR + P++KLYM+LITTK SNILEDLETLRLFSRV+PEYC L
Sbjct: 40 MNTGKQHTFVETESVRYV-YQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALE 98
Query: 372 ETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYKP*GRPKNARRRTA 551
E E+ F+L+FAFDEIVALGYRE+VNLAQ+R+F EMDSHEEK+++ + + R A
Sbjct: 99 ENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFR---AVRETQEREA 155
Query: 552 CANALRSCSARDWRRPNVASRRAHRCP 632
A R R + A R+ + P
Sbjct: 156 KAEMRRKAKELQQARRD-AERQGKKAP 181
Score = 105 bits (252), Expect = 2e-22
Identities = 49/58 (84%), Positives = 54/58 (93%)
Frame = +1
Query: 79 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVY 252
MVL+AA VCTK+GKA+VSRQFVEMT+ RIEGLLAAFPKLM G+QHTFVETESVRYVY
Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVY 58
>BC093636-1|AAH93636.1| 511|Homo sapiens archain 1 protein.
Length = 511
Score = 142 bits (343), Expect = 2e-33
Identities = 75/147 (51%), Positives = 98/147 (66%)
Frame = +3
Query: 192 INDRRTATYIC*NRVRQICLPPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLT 371
+N + T++ VR + P++KLYM+LITTK SNILEDLETLRLFSRV+PEYC L
Sbjct: 40 MNTGKQHTFVETESVRYV-YQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALE 98
Query: 372 ETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYKP*GRPKNARRRTA 551
E E+ F+L+FAFDEIVALGYRE+VNLAQ+R+F EMDSHEEK+++ + + R A
Sbjct: 99 ENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFR---AVRETQEREA 155
Query: 552 CANALRSCSARDWRRPNVASRRAHRCP 632
A R R + A R+ + P
Sbjct: 156 KAEMRRKAKELQQARRD-AERQGKKAP 181
Score = 105 bits (252), Expect = 2e-22
Identities = 49/58 (84%), Positives = 54/58 (93%)
Frame = +1
Query: 79 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVY 252
MVL+AA VCTK+GKA+VSRQFVEMT+ RIEGLLAAFPKLM G+QHTFVETESVRYVY
Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVY 58
>BC064936-1|AAH64936.1| 189|Homo sapiens ARCN1 protein protein.
Length = 189
Score = 141 bits (342), Expect = 2e-33
Identities = 67/107 (62%), Positives = 85/107 (79%)
Frame = +3
Query: 192 INDRRTATYIC*NRVRQICLPPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLT 371
+N + T++ VR + P++KLYM+LITTK SNILEDLETLRLFSRV+PEYC L
Sbjct: 40 MNTGKQHTFVETESVRYV-YQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALE 98
Query: 372 ETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYK 512
E E+ F+L+FAFDEIVALGYRE+VNLAQ+R+F EMDSHEEK+++
Sbjct: 99 ENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFR 145
Score = 105 bits (252), Expect = 2e-22
Identities = 49/58 (84%), Positives = 54/58 (93%)
Frame = +1
Query: 79 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVY 252
MVL+AA VCTK+GKA+VSRQFVEMT+ RIEGLLAAFPKLM G+QHTFVETESVRYVY
Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVY 58
>M21616-1|AAA36427.1| 1106|Homo sapiens platelet-derived growth factor
receptor protein.
Length = 1106
Score = 35.1 bits (77), Expect = 0.30
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = -1
Query: 777 VRVRARLPSFMAERPTVRVSLAGVVGIFSAID-SDGDDEDIVELPKPLPKDICERG---G 610
+R +ARLP F R + S +++A+ ++GD++ I+ LP P P ++ + G G
Sbjct: 986 LRSQARLPGFHGLRSPLDTSSV----LYTAVQPNEGDNDYIIPLPDPKP-EVADEGPLEG 1040
Query: 609 WPRLAASNLSRCN 571
P LA+S L+ N
Sbjct: 1041 SPSLASSTLNEVN 1053
>J03278-1|AAA60049.1| 1106|Homo sapiens platelet-derived growth factor
receptor protein.
Length = 1106
Score = 35.1 bits (77), Expect = 0.30
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = -1
Query: 777 VRVRARLPSFMAERPTVRVSLAGVVGIFSAID-SDGDDEDIVELPKPLPKDICERG---G 610
+R +ARLP F R + S +++A+ ++GD++ I+ LP P P ++ + G G
Sbjct: 986 LRSQARLPGFHGLRSPLDTSSV----LYTAVQPNEGDNDYIIPLPDPKP-EVADEGPLEG 1040
Query: 609 WPRLAASNLSRCN 571
P LA+S L+ N
Sbjct: 1041 SPSLASSTLNEVN 1053
>BC032224-1|AAH32224.1| 1106|Homo sapiens platelet-derived growth
factor receptor, beta polypeptide protein.
Length = 1106
Score = 35.1 bits (77), Expect = 0.30
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = -1
Query: 777 VRVRARLPSFMAERPTVRVSLAGVVGIFSAID-SDGDDEDIVELPKPLPKDICERG---G 610
+R +ARLP F R + S +++A+ ++GD++ I+ LP P P ++ + G G
Sbjct: 986 LRSQARLPGFHGLRSPLDTSSV----LYTAVQPNEGDNDYIIPLPDPKP-EVADEGPLEG 1040
Query: 609 WPRLAASNLSRCN 571
P LA+S L+ N
Sbjct: 1041 SPSLASSTLNEVN 1053
>AB209657-1|BAD92894.1| 777|Homo sapiens platelet-derived growth
factor receptor beta precursor variant protein.
Length = 777
Score = 35.1 bits (77), Expect = 0.30
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = -1
Query: 777 VRVRARLPSFMAERPTVRVSLAGVVGIFSAID-SDGDDEDIVELPKPLPKDICERG---G 610
+R +ARLP F R + S +++A+ ++GD++ I+ LP P P ++ + G G
Sbjct: 657 LRSQARLPGFHGLRSPLDTSSV----LYTAVQPNEGDNDYIIPLPDPKP-EVADEGPLEG 711
Query: 609 WPRLAASNLSRCN 571
P LA+S L+ N
Sbjct: 712 SPSLASSTLNEVN 724
>Y08387-1|CAA69667.1| 453|Homo sapiens mu-adaptin-related protein 2
protein.
Length = 453
Score = 34.3 bits (75), Expect = 0.52
Identities = 16/75 (21%), Positives = 39/75 (52%)
Frame = +3
Query: 267 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 446
LY+++ T++ + LE L + ++ +YC L E + + DE++ GY +
Sbjct: 64 LYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQ 123
Query: 447 SVNLAQVRSFVEMDS 491
+ + +R+F++ ++
Sbjct: 124 TTSTEMLRNFIQTEA 138
>BC018705-1|AAH18705.1| 453|Homo sapiens AP4M1 protein protein.
Length = 453
Score = 34.3 bits (75), Expect = 0.52
Identities = 16/75 (21%), Positives = 39/75 (52%)
Frame = +3
Query: 267 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 446
LY+++ T++ + LE L + ++ +YC L E + + DE++ GY +
Sbjct: 64 LYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQ 123
Query: 447 SVNLAQVRSFVEMDS 491
+ + +R+F++ ++
Sbjct: 124 TTSTEMLRNFIQTEA 138
>AF155158-1|AAD43328.1| 453|Homo sapiens adaptor-related protein
complex AP-4 mu4 subunit protein.
Length = 453
Score = 34.3 bits (75), Expect = 0.52
Identities = 16/75 (21%), Positives = 39/75 (52%)
Frame = +3
Query: 267 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 446
LY+++ T++ + LE L + ++ +YC L E + + DE++ GY +
Sbjct: 64 LYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQ 123
Query: 447 SVNLAQVRSFVEMDS 491
+ + +R+F++ ++
Sbjct: 124 TTSTEMLRNFIQTEA 138
>AF020796-1|AAD25869.1| 453|Homo sapiens mu-adaptin-related protein
2 protein.
Length = 453
Score = 34.3 bits (75), Expect = 0.52
Identities = 16/75 (21%), Positives = 39/75 (52%)
Frame = +3
Query: 267 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 446
LY+++ T++ + LE L + ++ +YC L E + + DE++ GY +
Sbjct: 64 LYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQ 123
Query: 447 SVNLAQVRSFVEMDS 491
+ + +R+F++ ++
Sbjct: 124 TTSTEMLRNFIQTEA 138
>BX640759-1|CAE45865.1| 192|Homo sapiens hypothetical protein
protein.
Length = 192
Score = 33.5 bits (73), Expect = 0.90
Identities = 16/75 (21%), Positives = 39/75 (52%)
Frame = +3
Query: 267 LYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRE 446
LY+++ T++ + LE L + ++ +YC L E + + DE++ GY +
Sbjct: 49 LYLVVTTSENVSPFSLLELLSGLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQ 108
Query: 447 SVNLAQVRSFVEMDS 491
+ + +R+F++ ++
Sbjct: 109 TTSTEMLRNFIQTEA 123
>M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear
protein protein.
Length = 484
Score = 30.3 bits (65), Expect = 8.4
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +3
Query: 441 RESVNLAQVRSFVEMDSHEEKIYKP*GRPKNARRRTACANALRSCSARDWRRPNVASRRA 620
RE+ +L + + +E D EEK R ++ RRRT ++ R +R RR + SR
Sbjct: 227 REAQSL--ISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSR 284
Query: 621 HRCPS 635
R S
Sbjct: 285 RRSKS 289
>BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein
protein.
Length = 332
Score = 30.3 bits (65), Expect = 8.4
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +3
Query: 441 RESVNLAQVRSFVEMDSHEEKIYKP*GRPKNARRRTACANALRSCSARDWRRPNVASRRA 620
RE+ +L + + +E D EEK R ++ RRRT ++ R +R RR + SR
Sbjct: 75 REAQSL--ISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSR 132
Query: 621 HRCPS 635
R S
Sbjct: 133 RRSKS 137
>BC150287-1|AAI50288.1| 1922|Homo sapiens Dicer1, Dcr-1 homolog
(Drosophila) protein.
Length = 1922
Score = 30.3 bits (65), Expect = 8.4
Identities = 23/85 (27%), Positives = 35/85 (41%)
Frame = +3
Query: 348 PEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYKP*GRP 527
P CV+L E V L E+ + V V+ E+D H+E+ GRP
Sbjct: 683 PMSCVRLAERVVALICCEKLHKIGELD--DHLMPVGKETVKYEEELDLHDEEETSVPGRP 740
Query: 528 KNARRRTACANALRSCSARDWRRPN 602
+ +RR A+ C + RP+
Sbjct: 741 GSTKRRQCYPKAIPECLRDSYPRPD 765
>BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 30.3 bits (65), Expect = 8.4
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +3
Query: 441 RESVNLAQVRSFVEMDSHEEKIYKP*GRPKNARRRTACANALRSCSARDWRRPNVASRRA 620
RE+ +L + + +E D EEK R ++ RRRT ++ R +R RR + SR
Sbjct: 227 REAQSL--ISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSR 284
Query: 621 HRCPS 635
R S
Sbjct: 285 RRSKS 289
>BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein.
Length = 394
Score = 30.3 bits (65), Expect = 8.4
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +3
Query: 441 RESVNLAQVRSFVEMDSHEEKIYKP*GRPKNARRRTACANALRSCSARDWRRPNVASRRA 620
RE+ +L + + +E D EEK R ++ RRRT ++ R +R RR + SR
Sbjct: 227 REAQSL--ISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSR 284
Query: 621 HRCPS 635
R S
Sbjct: 285 RRSKS 289
>BC002784-1|AAH02784.1| 321|Homo sapiens SFRS11 protein protein.
Length = 321
Score = 30.3 bits (65), Expect = 8.4
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +3
Query: 441 RESVNLAQVRSFVEMDSHEEKIYKP*GRPKNARRRTACANALRSCSARDWRRPNVASRRA 620
RE+ +L + + +E D EEK R ++ RRRT ++ R +R RR + SR
Sbjct: 227 REAQSL--ISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSR 284
Query: 621 HRCPS 635
R S
Sbjct: 285 RRSKS 289
>AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 424
Score = 30.3 bits (65), Expect = 8.4
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +3
Query: 441 RESVNLAQVRSFVEMDSHEEKIYKP*GRPKNARRRTACANALRSCSARDWRRPNVASRRA 620
RE+ +L + + +E D EEK R ++ RRRT ++ R +R RR + SR
Sbjct: 167 REAQSL--ISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSR 224
Query: 621 HRCPS 635
R S
Sbjct: 225 RRSKS 229
>AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 484
Score = 30.3 bits (65), Expect = 8.4
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +3
Query: 441 RESVNLAQVRSFVEMDSHEEKIYKP*GRPKNARRRTACANALRSCSARDWRRPNVASRRA 620
RE+ +L + + +E D EEK R ++ RRRT ++ R +R RR + SR
Sbjct: 227 REAQSL--ISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSR 284
Query: 621 HRCPS 635
R S
Sbjct: 285 RRSKS 289
>AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 30.3 bits (65), Expect = 8.4
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +3
Query: 441 RESVNLAQVRSFVEMDSHEEKIYKP*GRPKNARRRTACANALRSCSARDWRRPNVASRRA 620
RE+ +L + + +E D EEK R ++ RRRT ++ R +R RR + SR
Sbjct: 227 REAQSL--ISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSR 284
Query: 621 HRCPS 635
R S
Sbjct: 285 RRSKS 289
>AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 389
Score = 30.3 bits (65), Expect = 8.4
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +3
Query: 441 RESVNLAQVRSFVEMDSHEEKIYKP*GRPKNARRRTACANALRSCSARDWRRPNVASRRA 620
RE+ +L + + +E D EEK R ++ RRRT ++ R +R RR + SR
Sbjct: 227 REAQSL--ISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSR 284
Query: 621 HRCPS 635
R S
Sbjct: 285 RRSKS 289
>AJ132261-1|CAB38857.2| 1912|Homo sapiens hypothetical helicase
K12H4.8-like protein protein.
Length = 1912
Score = 30.3 bits (65), Expect = 8.4
Identities = 23/85 (27%), Positives = 35/85 (41%)
Frame = +3
Query: 348 PEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYKP*GRP 527
P CV+L E V L E+ + V V+ E+D H+E+ GRP
Sbjct: 673 PMSCVRLAERVVALICCEKLHKIGELD--DHLMPVGKETVKYEEELDLHDEEETSVPGRP 730
Query: 528 KNARRRTACANALRSCSARDWRRPN 602
+ +RR A+ C + RP+
Sbjct: 731 GSTKRRQCYPKAIPECLRDSYPRPD 755
>AB028449-1|BAA78691.1| 1924|Homo sapiens helicase-MOI protein.
Length = 1924
Score = 30.3 bits (65), Expect = 8.4
Identities = 23/85 (27%), Positives = 35/85 (41%)
Frame = +3
Query: 348 PEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYKP*GRP 527
P CV+L E V L E+ + V V+ E+D H+E+ GRP
Sbjct: 685 PMSCVRLAERVVALICCEKLHKIGELD--DHLMPVGKETVKYEEELDLHDEEETSVPGRP 742
Query: 528 KNARRRTACANALRSCSARDWRRPN 602
+ +RR A+ C + RP+
Sbjct: 743 GSTKRRQCYPKAIPECLRDSYPRPD 767
>AB023145-1|BAA76772.2| 1922|Homo sapiens KIAA0928 protein protein.
Length = 1922
Score = 30.3 bits (65), Expect = 8.4
Identities = 23/85 (27%), Positives = 35/85 (41%)
Frame = +3
Query: 348 PEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYKP*GRP 527
P CV+L E V L E+ + V V+ E+D H+E+ GRP
Sbjct: 683 PMSCVRLAERVVALICCEKLHKIGELD--DHLMPVGKETVKYEEELDLHDEEETSVPGRP 740
Query: 528 KNARRRTACANALRSCSARDWRRPN 602
+ +RR A+ C + RP+
Sbjct: 741 GSTKRRQCYPKAIPECLRDSYPRPD 765
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,871,241
Number of Sequences: 237096
Number of extensions: 2340011
Number of successful extensions: 5733
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5722
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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