Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20450
         (798 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051528-1|AAK92952.1|  532|Drosophila melanogaster GH18123p pro...   148   8e-36
AL024456-3|CAA19661.1|  531|Drosophila melanogaster EG:63B12.10 ...   148   8e-36
AF110234-1|AAF14250.1|  498|Drosophila melanogaster coatomer com...   148   8e-36
AE014298-266|AAF45673.1|  532|Drosophila melanogaster CG14813-PA...   148   8e-36
X95845-1|CAA65103.1|  398|Drosophila melanogaster tap protein.         34   0.26 
AY119146-1|AAM51006.1|  398|Drosophila melanogaster RE52048p pro...    34   0.26 
AF022883-1|AAC80572.1|  398|Drosophila melanogaster basic helix-...    34   0.26 
AE014296-2893|AAF49352.1|  398|Drosophila melanogaster CG7659-PA...    34   0.26 
AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-P...    31   2.4  
AE014298-1390|AAF46539.1|  574|Drosophila melanogaster CG15252-P...    29   7.4  
AE014296-3317|AAF49038.2| 1350|Drosophila melanogaster CG32226-P...    29   7.4  

>AY051528-1|AAK92952.1|  532|Drosophila melanogaster GH18123p
           protein.
          Length = 532

 Score =  148 bits (359), Expect = 8e-36
 Identities = 71/100 (71%), Positives = 86/100 (86%)
 Frame = +3

Query: 213 TYIC*NRVRQICLPPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQ 392
           TY+  + VR +   P++KLYMLLITTKASNILEDLETLRLFS+V+PEY   L E E++  
Sbjct: 47  TYVETDSVRYV-YQPMEKLYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDEKEIVEN 105

Query: 393 AFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYK 512
           AFNL+FAFDEIVALGYRESVNLAQ+++FVEMDSHEEK+Y+
Sbjct: 106 AFNLIFAFDEIVALGYRESVNLAQIKTFVEMDSHEEKVYQ 145



 Score =  106 bits (255), Expect = 3e-23
 Identities = 49/58 (84%), Positives = 55/58 (94%)
 Frame = +1

Query: 79  MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVY 252
           MVLIAA VCTK+GK ++SRQFVEMTKARIEGLLAAFPKLMT G+QHT+VET+SVRYVY
Sbjct: 1   MVLIAAAVCTKNGKVILSRQFVEMTKARIEGLLAAFPKLMTAGKQHTYVETDSVRYVY 58



 Score = 33.9 bits (74), Expect = 0.26
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = +2

Query: 500 KDLQAVRQTQXXXXXXXXXXXXXXLQRERLEAAKRGQP 613
           K  QAVRQTQ              LQR+R+EA+KRG P
Sbjct: 142 KVYQAVRQTQERDARQKMREKAKELQRQRMEASKRGGP 179


>AL024456-3|CAA19661.1|  531|Drosophila melanogaster EG:63B12.10
           protein.
          Length = 531

 Score =  148 bits (359), Expect = 8e-36
 Identities = 71/100 (71%), Positives = 86/100 (86%)
 Frame = +3

Query: 213 TYIC*NRVRQICLPPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQ 392
           TY+  + VR +   P++KLYMLLITTKASNILEDLETLRLFS+V+PEY   L E E++  
Sbjct: 47  TYVETDSVRYV-YQPMEKLYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDEKEIVEN 105

Query: 393 AFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYK 512
           AFNL+FAFDEIVALGYRESVNLAQ+++FVEMDSHEEK+Y+
Sbjct: 106 AFNLIFAFDEIVALGYRESVNLAQIKTFVEMDSHEEKVYQ 145



 Score =  106 bits (255), Expect = 3e-23
 Identities = 49/58 (84%), Positives = 55/58 (94%)
 Frame = +1

Query: 79  MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVY 252
           MVLIAA VCTK+GK ++SRQFVEMTKARIEGLLAAFPKLMT G+QHT+VET+SVRYVY
Sbjct: 1   MVLIAAAVCTKNGKVILSRQFVEMTKARIEGLLAAFPKLMTAGKQHTYVETDSVRYVY 58



 Score = 33.9 bits (74), Expect = 0.26
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = +2

Query: 500 KDLQAVRQTQXXXXXXXXXXXXXXLQRERLEAAKRGQP 613
           K  QAVRQTQ              LQR+R+EA+KRG P
Sbjct: 142 KVYQAVRQTQERDARQKMREKAKELQRQRMEASKRGGP 179


>AF110234-1|AAF14250.1|  498|Drosophila melanogaster coatomer
           complex COPI delta-COPsubunit protein.
          Length = 498

 Score =  148 bits (359), Expect = 8e-36
 Identities = 71/100 (71%), Positives = 86/100 (86%)
 Frame = +3

Query: 213 TYIC*NRVRQICLPPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQ 392
           TY+  + VR +   P++KLYMLLITTKASNILEDLETLRLFS+V+PEY   L E E++  
Sbjct: 14  TYVETDSVRYV-YQPMEKLYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDEKEIVEN 72

Query: 393 AFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYK 512
           AFNL+FAFDEIVALGYRESVNLAQ+++FVEMDSHEEK+Y+
Sbjct: 73  AFNLIFAFDEIVALGYRESVNLAQIKTFVEMDSHEEKVYQ 112



 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 21/25 (84%), Positives = 24/25 (96%)
 Frame = +1

Query: 178 AAFPKLMTGGRQHTFVETESVRYVY 252
           AAFPKLMT G+QHT+VET+SVRYVY
Sbjct: 1   AAFPKLMTAGKQHTYVETDSVRYVY 25



 Score = 33.9 bits (74), Expect = 0.26
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = +2

Query: 500 KDLQAVRQTQXXXXXXXXXXXXXXLQRERLEAAKRGQP 613
           K  QAVRQTQ              LQR+R+EA+KRG P
Sbjct: 109 KVYQAVRQTQERDARQKMREKAKELQRQRMEASKRGGP 146


>AE014298-266|AAF45673.1|  532|Drosophila melanogaster CG14813-PA
           protein.
          Length = 532

 Score =  148 bits (359), Expect = 8e-36
 Identities = 71/100 (71%), Positives = 86/100 (86%)
 Frame = +3

Query: 213 TYIC*NRVRQICLPPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQ 392
           TY+  + VR +   P++KLYMLLITTKASNILEDLETLRLFS+V+PEY   L E E++  
Sbjct: 47  TYVETDSVRYV-YQPMEKLYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDEKEIVEN 105

Query: 393 AFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIYK 512
           AFNL+FAFDEIVALGYRESVNLAQ+++FVEMDSHEEK+Y+
Sbjct: 106 AFNLIFAFDEIVALGYRESVNLAQIKTFVEMDSHEEKVYQ 145



 Score =  106 bits (255), Expect = 3e-23
 Identities = 49/58 (84%), Positives = 55/58 (94%)
 Frame = +1

Query: 79  MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVY 252
           MVLIAA VCTK+GK ++SRQFVEMTKARIEGLLAAFPKLMT G+QHT+VET+SVRYVY
Sbjct: 1   MVLIAAAVCTKNGKVILSRQFVEMTKARIEGLLAAFPKLMTAGKQHTYVETDSVRYVY 58



 Score = 33.9 bits (74), Expect = 0.26
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = +2

Query: 500 KDLQAVRQTQXXXXXXXXXXXXXXLQRERLEAAKRGQP 613
           K  QAVRQTQ              LQR+R+EA+KRG P
Sbjct: 142 KVYQAVRQTQERDARQKMREKAKELQRQRMEASKRGGP 179


>X95845-1|CAA65103.1|  398|Drosophila melanogaster tap protein.
          Length = 398

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 18/59 (30%), Positives = 37/59 (62%)
 Frame = +3

Query: 300 NILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSF 476
           N+ + LE LR+    +PE   +LT+ E+L  A N +FA ++++  G   +++L ++++F
Sbjct: 169 NLNDALEKLRVTLPSLPEE-TKLTKIEILRFAHNYIFALEQVLESGGSINLDLEKLQNF 226


>AY119146-1|AAM51006.1|  398|Drosophila melanogaster RE52048p
           protein.
          Length = 398

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 18/59 (30%), Positives = 37/59 (62%)
 Frame = +3

Query: 300 NILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSF 476
           N+ + LE LR+    +PE   +LT+ E+L  A N +FA ++++  G   +++L ++++F
Sbjct: 169 NLNDALEKLRVTLPSLPEE-TKLTKIEILRFAHNYIFALEQVLESGGSINLDLEKLQNF 226


>AF022883-1|AAC80572.1|  398|Drosophila melanogaster basic
           helix-loop-helix neuraltranscription factor BIPAROUS
           protein.
          Length = 398

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 18/59 (30%), Positives = 37/59 (62%)
 Frame = +3

Query: 300 NILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSF 476
           N+ + LE LR+    +PE   +LT+ E+L  A N +FA ++++  G   +++L ++++F
Sbjct: 169 NLNDALEKLRVTLPSLPEE-TKLTKIEILRFAHNYIFALEQVLESGGSINLDLEKLQNF 226


>AE014296-2893|AAF49352.1|  398|Drosophila melanogaster CG7659-PA
           protein.
          Length = 398

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 18/59 (30%), Positives = 37/59 (62%)
 Frame = +3

Query: 300 NILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSF 476
           N+ + LE LR+    +PE   +LT+ E+L  A N +FA ++++  G   +++L ++++F
Sbjct: 169 NLNDALEKLRVTLPSLPEE-TKLTKIEILRFAHNYIFALEQVLESGGSINLDLEKLQNF 226


>AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-PA
            protein.
          Length = 9196

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -1

Query: 681  SDGDDEDIVELPKPLPKDICE 619
            SD + +D +E+PKPL K IC+
Sbjct: 4007 SDDETDDEIEIPKPLDKPICQ 4027


>AE014298-1390|AAF46539.1|  574|Drosophila melanogaster CG15252-PA
           protein.
          Length = 574

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -1

Query: 696 FSAIDSDGDDE--DIVELPKPLPKDICERGGWPRLAASN 586
           F  I  DG +E     ELP+P  K   E GGW   AA+N
Sbjct: 471 FRPISEDGSEERHGSAELPRPRKKK--EGGGWAAAAANN 507


>AE014296-3317|AAF49038.2| 1350|Drosophila melanogaster CG32226-PA
            protein.
          Length = 1350

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = +2

Query: 398  QLAICVRRDCRSWVQRKRQSSAGPFVC*NGLSRGKDLQAVRQ 523
            +L  CVRR  R W++R R SS+GP+     LS+ K L A  Q
Sbjct: 1108 KLTDCVRR--RRWMKRCRLSSSGPW---QELSQSKILDAALQ 1144


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,594,429
Number of Sequences: 53049
Number of extensions: 731067
Number of successful extensions: 2103
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2103
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)