Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20444
         (742 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   2.5  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    25   2.5  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    24   4.3  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    24   4.3  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   7.5  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   9.9  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 287  GARVYINRPHEEAPQLRQWGMRLDINRPDIGS 192
            GAR Y N P ++ P+L + G +L   +PDI S
Sbjct: 1033 GARPYENVPAKDVPELIEIGHKLP--QPDICS 1062



 Score = 23.8 bits (49), Expect = 5.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 606  IRWDLVILKRARKFTSKANVVAFSI 680
            I+W  +   R R FTSK++V AF I
Sbjct: 1000 IKWLALECIRHRVFTSKSDVWAFGI 1024


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 470 QWWGAPMDINRPHGGGSSTTVAGRAGKYQRTA 375
           Q +G    +   H GGS+ T+    GKY  +A
Sbjct: 294 QSYGLGSSLGSAHHGGSAGTLGSLVGKYDLSA 325



 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 5   TSCRSRTPCCTACXARSLPSWR 70
           T+ R    CCT C  R+   WR
Sbjct: 168 TATRRLGLCCTNCGTRTTTLWR 189


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 250 ASSCGLLIXTRAPRHCS 300
           A SCGL+  T A R CS
Sbjct: 185 AKSCGLITRTNAERLCS 201


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 14/39 (35%), Positives = 15/39 (38%)
 Frame = -2

Query: 318 DRGGSSTTVAGRAGXYQQTARGGSSITAVGHAVGHQPTG 202
           DR        G  G       GG S+ A  HA GH P G
Sbjct: 270 DRKQKKKAETGSVGGGMGGLGGGQSLVAA-HAQGHNPHG 307



 Score = 24.2 bits (50), Expect = 4.3
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -1

Query: 382 GPHGGGSSTTAVVHAVGHQPTG 317
           G  GGG S  A  HA GH P G
Sbjct: 287 GGLGGGQSLVAA-HAQGHNPHG 307


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
            protein.
          Length = 1325

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 18/78 (23%), Positives = 33/78 (42%)
 Frame = -1

Query: 382  GPHGGGSSTTAVVHAVGHQPTGQRRLLNYSGGARGXISTDRTRRLLNYGSGACGWTSTDR 203
            GP G  ++ T + H           L+  +    G  +T   +++     G C W+   +
Sbjct: 907  GPQGMMAAETMMRHVARTLNRDYVELIELNMYREGD-TTHYNQQIEGCNVGKC-WSEVLQ 964

Query: 202  T*EATKRRRALEKIHRLH 149
            + +  KRR A+EK +  H
Sbjct: 965  SADFAKRREAVEKFNEEH 982


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -3

Query: 500 NGCTQEALKLQWWGAPMDINR 438
           NG T     + WW A + I R
Sbjct: 268 NGATSRRQPVYWWNASIKIQR 288


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 805,004
Number of Sequences: 2352
Number of extensions: 17753
Number of successful extensions: 52
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)