Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20444
         (742 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY039244-1|AAK72409.1|  194|Homo sapiens C21orf58 form B protein.      36   0.15 
AY039243-1|AAK72408.1|  239|Homo sapiens C21orf58 form A protein.      36   0.15 
AK098098-1|BAC05232.1|  216|Homo sapiens protein ( Homo sapiens ...    36   0.15 
BC039704-1|AAH39704.1|  217|Homo sapiens MLXIP protein protein.        32   1.9  

>AY039244-1|AAK72409.1|  194|Homo sapiens C21orf58 form B protein.
          Length = 194

 Score = 35.9 bits (79), Expect = 0.15
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 197 LCPVG*CPTACPTAVIEEPPRAVC*YXPARPATVVEEPP 313
           L P G  PTA P+ +  +PPR +    P  PAT++++ P
Sbjct: 95  LPPTGILPTASPSPLAPDPPRIILPTVPQPPATIIQQLP 133


>AY039243-1|AAK72408.1|  239|Homo sapiens C21orf58 form A protein.
          Length = 239

 Score = 35.9 bits (79), Expect = 0.15
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 197 LCPVG*CPTACPTAVIEEPPRAVC*YXPARPATVVEEPP 313
           L P G  PTA P+ +  +PPR +    P  PAT++++ P
Sbjct: 95  LPPTGILPTASPSPLAPDPPRIILPTVPQPPATIIQQLP 133


>AK098098-1|BAC05232.1|  216|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40779 fis, clone TRACH2005698. ).
          Length = 216

 Score = 35.9 bits (79), Expect = 0.15
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 197 LCPVG*CPTACPTAVIEEPPRAVC*YXPARPATVVEEPP 313
           L P G  PTA P+ +  +PPR +    P  PAT++++ P
Sbjct: 72  LPPTGILPTASPSPLAPDPPRIILPTVPQPPATIIQQLP 110


>BC039704-1|AAH39704.1|  217|Homo sapiens MLXIP protein protein.
          Length = 217

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
 Frame = +2

Query: 122 HRSSRRNPFVQSVDFLQRSPPLS--SFLCPVG*CPTACPTAVIEEPPRAVC*YXPARPAT 295
           H S   +PF+Q  DF    PPLS    + PV   P   P A    PP     + P + A 
Sbjct: 8   HTSRTEDPFIQPTDFGPSEPPLSVPPPISPV--LPLVPPPATALNPPAPPTFHQPQKFAG 65

Query: 296 VVEEPPLSGRLMSNRMHH 349
           V + P +     S  + H
Sbjct: 66  VNKAPSVITHTASATLTH 83


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,125,099
Number of Sequences: 237096
Number of extensions: 2754756
Number of successful extensions: 12757
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12750
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)